Fluorescence Curves Research Articles

A comparison of Jasmonic acid and salicylic acid-induced salinity stress tolerance in safflower plants, particularly on sodium (Na) and potassium (K) nutrient contents

Jasmonic acid (JA) and salicylic acid (SA) are phytohormones that have a significant role in the induction of plant defense against different stress factors. The role of these phytohormones was assessed on several physicochemical properties of safflower plants subjected to salinity. JA and, especially SA, caused plants had more Na+ and less K+ content compared with the control plants. The JA and SA increased the catalase (CAT) activity, whereas significantly decreased the reactive oxygen species (ROS) production and lipid peroxidation in safflower plants under salinity stress. No significant effects of phytohormones were observed on peroxidase (POD) and ascorbate peroxidase (APX) activities in safflower plants exposed to salinity stress. Data on plant fluorescence indicated that seed priming with JA and SA decreases ROS production in photosystems. The effect of JA and SA under salinity stress was observed to significantly influence the light-dependent phase (J-I and I-P phases of chlorophyll a fluorescence curve) in comparison to the rest of the electron transport chain in safflower plants. This finding was supported by the high improvement of quantum yield of reduction of the end electron acceptors at the photosystem I acceptor side (φRo) activity under severe salinity stress. The observation indicated that the SA treatment was more effective in safflower plants exposed to salinity stress in comparison to the JA treatment.

Parameters for Induction Curves of Prompt and Delayed Fluorescence and Redox State of PSI–P700 for Birch and Linden Leaves in Various Urban Environments

The photosynthetic characteristics of linden leaves (Tilia cordata L.) and birches (Betula verrukosa L.) growing near the city highways of Moscow (MKAD, Moscow Ring Road) by simultaneously recording the induction curves of chlorophyll fluorescence and the redox state of the PSI pigment–P700. In trees near highways, deterioration of electron transport at the level of plastoquinones (δRo) and decrease of P700+ reduction was revealed, despite the rather high rates of photosynthetic efficiency (FV/FM). In birch leaves growing along the Moscow Ring Road, a decrease in the outflow of electrons from PSI and a decrease in the intensity of delayed fluorescence at 30 ms and 1 s, associated with a decrease in the electrical and chemical components of the electrochemical proton gradient on photosynthetic membranes, were revealed. In plants near highways, an increase in the degree of photoinhibition and a slowdown in the reactions of restoring photosynthetic activity in the dark after the cessation of photooxidative stress were noted, which confirms the probable effect of unfavorable urban conditions on the biosynthesis of proteins in PSII reaction centers. The following fluorescence parameters are proposed as indicators of the state of trees in an urban environment: total performance index (PItotal) and the quantum yield of reduction of electron acceptors on the acceptor side of PSI (φRo).

P07.02.B A FATTY-ACID BASED PROBE FOR NEAR INFRARED FLUORESCENCE GUIDED SURGERY OF GLIOBLASTOMA

Abstract BACKGROUND Glioblastoma (GBM) is the most aggressive primary tumor of the brain with a median survival of 15 months. Maximal safe resection is the initial standard-of-care, but resection is limited by the diffuse invasiveness of the tumor. Fluorescence imaging has been shown to aid intra-operative tumor identification, but the current options fail to do so consistently. Recent literature has shown fatty acid (FA) metabolism and uptake to be altered in glioblastoma. For this reason, we introduce a novel, near-infrared fluorescent dye, fatty-acid indocyanine green (FA-ICG), that aims to target the enhanced fatty acid uptake of glioblastoma. We evaluate this dye in in vitro and in vivo models. MATERIAL AND METHODS FA-ICG consists of palmitic acid, a long-chain, saturated fatty acid, that has been covalently linked to indocyanine green (ICG), as described previously. We validated FA-ICG in vitro in one animal cell line and four (two primary and two recurrent) patient-derived neurosphere glioblastoma cell lines. We performed in vitro temporal uptake dynamics and oleic acid based inhibition assays for FA-ICG and ICG on all cell lines. Time uptake was investigated by starving and then incubating cells with either dye for an increasing length of time. Similarly, inhibition was tested by incubating cells with increasing concentrations of oleic acid (in addition to either FA-ICG or ICG). Subsequently, the dye was tested in an NRMI mouse model without tumor for pharmacokinetic properties. Mice were injected with the dye and blood was collected at multiple time points post-injection. Quantification of fluorescence signals in serum was performed using a fluorescent standard curve. RESULTS FA-ICG was taken up by all glioblastoma cells lines. Across all cell cultures, uptake of FA-ICG showed a stepwise increase of up to 5-30 times higher uptake (compared to uptake at baseline) when cells were starved longer, while ICG uptake showed the same trend in only three out of five cell lines (and only up to 5 times higher uptake than at baseline). Oleic acid was found to inhibit FA-ICG uptake by 40% at low concentrations and up to 80-90% at higher concentrations across all cell lines, while ICG was unaffected. In vivo pharmacokinetics showed FA-ICG to have a mean half-life of 65 minutes in blood. CONCLUSION Our findings indicate that the uptake of FA-ICG is affected by starvation and oleic acid competition across all cell lines while ICG uptake is only partially affected by starvation. In vivo pharmacokinetic shows the half-life of FA-ICG to be significantly longer than that of ICG in literature. Taken together, these findings might point to an enhanced targeting and retention mechanism of FA-ICG in glioblastoma. Therefore, these results support the further translation of FA-ICG for fluorescence guided surgery in GBM.

Occurrence, Characteristics, and qPCR-Based Identification of Pectobacterium versatile Causing Soft Rot of Chinese Cabbage in China.

Pectobacterium is one of the most important genera of phytopathogenic bacteria. It can cause soft-rot diseases on a wide range of plant species across the world. In this study, three Pectobacterium strains (KC01, KC02, and KC03) were isolated from soft-rotted Chinese cabbage in Beijing, China. These three strains were identified as Pectobacterium versatile based on phylogenetic analysis of Pectobacterium 16S ribosomal RNA, pmrA, and 504 Pectobacterium core genes, as well as a genomic average nucleotide identity analysis. Their biochemical characteristics were found to be similar to the P. versatile type strain ICMP9168T but differed in response to citric acid, stachyose, D-glucuronic acid, dextrin, and N-acetyl-β-D-mannosamine. All of the tested P. versatile strains showed different carbohydrate utilization abilities compared with P. carotovorum and P. odoriferum, particularly in their ability to utilize D-arabitol, L-rhamnose, and L-serine. Under laboratory conditions, the maceration ability of P. versatile on Chinese cabbage was the highest at 28°C, compared with those at 13, 28, 23, and 33°C. Additionally, P. versatile could infect all of the 17 known Pectobacterium host plants, except for Welsh onion (Allium fistulosum). A SYBR Green quantitative PCR (qPCR) detection system was developed to distinguish P. versatile from other soft-rot bacteria based on the combined performance of melting curve (with a single melting peak at around 85°C) and fluorescence curve (with cycle threshold <30) when the bacterial genomic DNA concentration was in the range of 10 pg/µl to 10 ng/µl. This study is the first to report the presence of P. versatile on Chinese cabbage in China, as well as a specific and sensitive qPCR assay that can be used to quickly identify P. versatile. The work contributes to a better understanding of P. versatile and will facilitate the effective diagnosis of soft-rot disease, ultimately benefitting commercial crop production.

Molecular analysis of NlugCSP3 with behaviorally active ligands of the brown planthopper, Nilaparvata lugens (Hemiptera: Delphacidae)

The insect olfactory system is sensitive to the complicated chemical environment. Insect’s chemosensory proteins (CSPs) supposedly act as transport of plant volatiles across the sensillar lymph and competitive fluorescent binding assay was commonly used to test the binding affinities with various plant volatiles. However, extensive research to determine the physiological role of CSPs is necessary and helpful through binding interaction of a protein with the plant volatiles. In this comparative study, we employed phylogenetic analysis, fluorescence spectra, quenching mode, and thermodynamic force to characterize Nilaparvata lugens CSP3 (NlugCSP3). The phylogenetic tree revealed that amino acid sequence of NlugCSP3 showed extremely close similarities with Laodelphax striatella (LstrCSP10 & LstrCSP11) and Sogatella furcifera (SurCSP3). The Stern-Volmer (SV) curve of NlugCSP3 fluorescence quenching indicated that nonadecane and 2-tridecanone clearly quenched NlugCSP3 fluorescence as a stable static quenching mode. Meanwhile, α-terpinene and farnesene collided with NlugCSP3, instead of forming stable complexes. The thermodynamic analysis of NlugCSP3 revealed that spontaneous binding interaction occurred in nonadecane and 2-tridecanone and is driven primarily by hydrophobic interactions. This study not only provides the information about the binding interaction of protein with the volatiles, but also improves the efficient recognition of behaviorally elicited volatiles that could be used in the management of brown planthopper.

Recording of Low-Oxygen Stress Response Using Chlorophyll Fluorescence Kinetics in Apple Fruit

AbstractLong-term storage of apples (Malus x domestica, Borkh.) is increasingly taking place under Dynamic Controlled Atmosphere (DCA). The oxygen level is lowered to ≤ 1 kPa O2 and the apples are stored just above the Lower Oxygen Limit (LOL). Low oxygen stress during controlled atmosphere storage can lead to fermentation in apples if oxygen levels are too low. Chlorophyll fluorescence can be used to detect low-oxygen stress at an early stage during storage. The currently available non-imaging fluorescence systems often use the minimal fluorescence (Fo) parameter. In contrast, the use of chlorophyll fluorescence kinetics is insufficiently described. Therefore, this study aimed to gain more knowledge about the response of chlorophyll fluorescence kinetics to low oxygen stress in apples using a fluorescence imaging system. The results show that the kinetic fluorescence curves differ under aerobic and fermentation conditions. The fermentative conditions initiated a decrease in fluorescence intensity upon application of the saturation pulses during exposure to actinic light. This result was made at 18 °C and 2 °C ambient temperatures. Interestingly, the kinetic curve changed at 2 °C before fermentation products accumulated in the apples. Non-photochemical quenching (NPQ) decreased under fermentation conditions in the dark phase after relaxation. Upon entering the dark relaxation phase after Kautsky induction, ɸPSII began to increase. Under atmospheric oxygen conditions, ɸPSII reached values of 0.81 to 0.76, while under fermentation, ɸPSII values ranged from 0.57 to 0.44.

STR genotyping by real-time PCR using QueSTR probes

QueSTR probes provide a feasible alternative for implementing forensic Short Tandem Repeat (STR) genotyping on lab-on-a-chip (LoC) devices. Unlike capillary electrophoresis (CE), which poses challenges for LoC implementation, QueSTR probes have been demonstrated to accurately genotype STRs in a hybridization curve assay after PCR amplification. In this study, we modified the QueSTR probe assay for use as a hydrolysis probe assay during qPCR. An asymmetric real-time PCR was performed with QueSTR probes and RNase H2 in the master mix, during which the fluorescence was recorded. Designed to hybridize with specific STR alleles, QueSTR probes contain a fluorescent dye and quencher molecule, enabling detection of probe hybridization through RNase H2-mediated cleavage of the RNA:DNA duplex, which releases the quencher. Matching probes yielded lower threshold cycle values and steeper incline of fluorescence curves compared to non-matching probes, indicating accurate genotype. The QueSTR qPCR assay was used to successfully genotype four CODIS core loci (D16S539, D7S820, TPOX, and TH01) in 12 samples, with one exception. The integration of amplification and detection in a single reaction supports the use of QueSTR probes for miniaturizing STR genotyping, thereby complementing CE-based analyses in centralized labs.

Water-Deficit Stress in the Epiphytic Elkhorn Fern: Insight into Photosynthetic Response.

Progressive climate changes cause disturbance of water relations in tropical rainforests, where epiphytic ferns are an important element of biodiversity. In these plants, the efficiency of photosynthesis is closely related to the efficiency of water transport. In addition, due to the lack of contact with the soil, epiphytes are extremely susceptible to water-deficit stress. The aim of this experiment was to determine the response of the photosynthetic apparatus of Platycerium bifurcatum to a 6-week water deficit. The hydration and pigment composition of leaves were determined using reflectance spectroscopy and epifluorescence microscopy. Chlorophyll a fluorescence kinetics parameters, fluorescence induction curves (OJIP), low-temperature fluorescence curves at 77 K and proline concentration were analyzed at seven time points. After a decrease in leaf hydration by 10-15%, there were disturbances in the oxidation-reduction balance, especially in the initial photochemical reactions, a rapid decrease in plant vitality (PI) and significant fluctuations in chlorophyll a fluorescence parameters. The relative size of PSI antenna structures compared to PSII decreased in the following weeks of water deficit. Changes in photochemical reactions were accompanied by a decrease in gross photosynthesis and an increase in proline concentration. Changes in the functioning of photosynthesis light phase and the pigment composition of leaves are related to the resistance of elkhorn fern to long-term water deficit.

Enhanced ∼2.85 μm mid-infrared emission of Na5Lu9F32: Pr3+/Ho3+ single crystal by introducing of non active Gd3+ ions

A series of novel Na5Lu9F32 fluoride single crystals by keeping the concentrations of Ho3+ (0.5 mol%) and Pr3+ (0.1 mol%) fixed and varying the concentrations of Gd3+ ions (i.e., 0, 0.5, 1.0, 1.2, 1.5 mol%) were prepared successfully by a reformative Bridgman technique for application of 2.85 μm mid-infrared. The impact of the non active Gd3+ ion on the crystallographic structure and optical properties of the single crystal were explored by the aid of the X-ray diffraction, Rietveld refinement, spectra of absorption and emission and decay curves of fluorescence. By leading Gd3+ (1.2 mol%) into Ho3+(0.5 mol%)/Pr3+(0.1 mol%) incorporated Na5Lu9F32 single crystal, the emission intensity at ∼ 2.85 μm was fulfilled significantly about two times enhancement. The destruction of [Ho3+-Ho3+] ion quench clusters and release more luminescent ions are in charge of the enhancement of the emission at 2.85 μm by leading Gd3+ into the fluoride single crystal. The maximum emission cross-section, ∼5.2 × 10−20 cm2, at ∼2.85 μm was estimated on the basis of the emission spectra. Thus, the grown Pr3+/Ho3+/Gd3+ incorporated Na5Lu9F32 fluoride single crystals could be an excellent candidate for source of ∼2.85 μm mid-infrared solid-state laser device.

A PET and ESIPT-communicated ratiometric, turn-on chromo-fluorogenic sensor for rapid and sensitive detection of sarin gas mimic, diethylchlorophosphate

Fast and precise identification of toxic G-series nerve agents in the solution and vapor phase is urgently needed to save human beings from unwanted wars and terrorist attacks, which is challenging to execute practically. In this article, we have designed and synthesized a sensitive and selective phthalimide-based chromo-fluorogenic sensor, DHAI, by a simple condensation process that shows ratiometric and turns on chromo-fluorogenic behavior towards Sarin gas mimic diethylchlorophosphate (DCP) in liquid and vapor phases, respectively. A colorimetric change, from yellow to colorless, is observed in the DHAI solution due to the introduction of DCP in daylight. A remarkable cyan color photoluminescence enhancement is noticed in the presence of DCP in the DHAI solution, which is observable to the naked under a portable 365nm UV lamp. The mechanistic aspects of the detection of DCP by employing DHAI have been revealed by time-resolved photoluminescence decay analysis and 1H NMR titration investigation. Our probe DHAI exhibits linear photoluminescence enhancement from 0 to 500μM with a detection limit of nanomolar range from non-aqueous to semi-aqueous media. For practical utility, a DHAI-stained test kit employing Whatman-41 filter paper has been fabricated and used as a portable and displayable photonic device for on-site detection of Sarin gas surrogate, DCP. Also, a dip-stick experiment has been demonstrated to identify the vapor of Sarin gas mimics DCP colorimetrically and fluorometrically. The concentrations of DCP in various water samples have been evaluated with the help of a standard fluorescence curve for real sample analysis.

Original Na5(Lu1–x–yGdxYy)9F32: Pr3+/Ho3+ Hybrid Single Crystals for Efficient ∼2.9 μm Mid-Infrared Emission

A novel Ho3+/Pr3+/Y3+/Gd3+ multiply doped Na5Lu9F32 mixed single crystal was successfully grown via a modified Bridgman technique. The structure of the mixed crystal was characterized by means of X-ray diffraction and Raman spectra. The impacts of Y3+ and Gd3+ ions on the 2.9 μm emission of Na5Lu9F32 single crystals, which incorporated fixed Ho3+/Pr3+, were investigated systematically with the aid of the optical spectra and decay curves of fluorescence. The 2.9 μm emission intensity (Ho3+: 5I6 → 5I7) was further heightened upon gradually introducing both Y3+ and Gd3+ ions into Ho3+/Pr3+-incorporated single crystals pumped at 640 nm. The brokenness of ionic quenching clusters of [Ho3+–Ho3+] and the release of more luminescent ions are in charge of the augment of emission at 2.9 μm by introducing Gd3+ or Y3+ ions into the Ho3+/Pr3+ codoped single crystals. A value of ∼8.2 × 10–21 cm2 was estimated for the maximum emission cross section at 2.9 μm of the mixed crystal. The processing of energy transfer among Ho3+, Pr3+, Y3+, and Gd3+ ions was investigated, and the energy transfer efficiency for Ho3+: 5I7 → Pr3+: 3F2 was approximately 57.32%. The Na5Lu9F32-doped Ho3+/Pr3+/Y3+/Gd3+ mixed crystals may be a new laser gain medium for 2.9 μm generation because of their special spectral and physicochemical properties.

Biophysical, Biochemical, and Photochemical Analyses Using Reflectance Hyperspectroscopy and Chlorophyll a Fluorescence Kinetics in Variegated Leaves.

The adjustments that occur during photosynthesis are correlated with morphological, biochemical, and photochemical changes during leaf development. Therefore, monitoring leaves, especially when pigment accumulation occurs, is crucial for monitoring organelles, cells, tissue, and whole-plant levels. However, accurately measuring these changes can be challenging. Thus, this study tests three hypotheses, whereby reflectance hyperspectroscopy and chlorophyll a fluorescence kinetics analyses can improve our understanding of the photosynthetic process in Codiaeum variegatum (L.) A. Juss, a plant with variegated leaves and different pigments. The analyses include morphological and pigment profiling, hyperspectral data, chlorophyll a fluorescence curves, and multivariate analyses using 23 JIP test parameters and 34 different vegetation indexes. The results show that photochemical reflectance index (PRI) is a useful vegetation index (VI) for monitoring biochemical and photochemical changes in leaves, as it strongly correlates with chlorophyll and nonphotochemical dissipation (Kn) parameters in chloroplasts. In addition, some vegetation indexes, such as the pigment-specific simple ratio (PSSRc), anthocyanin reflectance index (ARI1), ratio analysis of reflectance spectra (RARS), and structurally insensitive pigment index (SIPI), are highly correlated with morphological parameters and pigment levels, while PRI, moisture stress index (MSI), normalized difference photosynthetic (PVR), fluorescence ratio (FR), and normalized difference vegetation index (NDVI) are associated with photochemical components of photosynthesis. Combined with the JIP test analysis, our results showed that decreased damage to energy transfer in the electron transport chain is correlated with the accumulation of carotenoids, anthocyanins, flavonoids, and phenolic compounds in the leaves. Phenomenological energy flux modelling shows the highest changes in the photosynthetic apparatus based on PRI and SIPI when analyzed with Pearson's correlation, the hyperspectral vegetation index (HVI) algorithm, and the partial least squares (PLS) to select the most responsive wavelengths. These findings are significant for monitoring nonuniform leaves, particularly when leaves display high variation in pigment profiling in variegated and colorful leaves. This is the first study on the rapid and precise detection of morphological, biochemical, and photochemical changes combined with vegetation indexes for different optical spectroscopy techniques.

Polymorphism of genes of circadian rhythms in employees of a continuous production enterprise with a shift work schedule

The circadian system plays an important role in regulating the functions of the human body. As a result of violations of the circadian system, functional disorders such as sleep disorders, carbohydrate metabolism, metabolic syndrome turning into obesity, cardiovascular pathology, oncological processes occur. One of the socially significant causes of circadian rhythm disorders is a shift work schedule.&#x0D; The study aims to explore the genetic status of employees and identify markers of predisposition to the formation of "intolerance" of shift work.&#x0D; Researchers have examined two groups of employees of the enterprise: observation group — 40 people gave 23–63 years old (30 women, 10 men) with a shift work schedule, the comparison group consisted of 51 people 24–62 years old (41 women, 10 men) of the administrative apparatus with a daily work schedule. Typing of polymorphic loci of the circadian system genes was carried out by sets of the company "Syntol" (Russia) using the Real-Time PCR method on a CFX96 device with allelic discrimination of fluorescence curves.&#x0D; Genotyping of the loci of the five main circadian genes allowed us to establish that the occurrence of the minor allele T of the MTNR1A melatonin receptor gene (rs34532313) in continuous production workers is 30%, which is five times higher than in workers with a standardized work schedule (p&lt;0.05). At the same time, workers with a shift schedule had a significant hypo-expression of serum serotonin (1.54 times, p&lt;0.05) relative to the comparison group.&#x0D; Continuous production workers have an increased occurrence of the minor allele of the MTNR1A melatonin receptor T gene (rs34532313) with a simultaneous decrease in the expression of serotonin catecholamine, which in shift work conditions can affect the formation of dysregulatory disorders of the functioning of homeostatic systems and the course of physiological metabolic processes. As a result, the polymorphism of the MTNR1A gene (rs34532313) can use as a marker of "intolerance" to shift work.&#x0D; Limitations. There are quantitative restrictions on the observation group of persons of different genders.&#x0D; Ethics. When conducting the study, the authors were guided by the Ethical principles of conducting medical research with the participation of a person as a subject, set out in the Helsinki Declaration of the World Medical Association of the last revision. The patients signed a voluntary informed consent for the examination.

HpaII-assisted and linear amplification-enhanced isothermal exponential amplification fluorescent strategy for rapid and sensitive detection of DNA methyltransferase activity.

The detection of methyltransferase (MTase) activity is of great significance in methylation-related disease diagnosis and drug screening. Herein, a HpaII-assisted and linear amplification-enhanced exponential amplification strategy is proposed for sensitive and label-free detection of M.SssI MTase activity. The P1 probe contains self-complementary sequence 5'-CTAGCCGGCTAG-3' at 3'-terminal. After denaturation and annealing, P1 probes hybridize with itself to generate P1 duplexes. M.SssI MTase induces methylation of cytosine at 5'-CG-3' in P1 duplexes, and thus, HpaII fails to cleave at 5'-CCGG-3' due to methylation sensitivity, leaving P1 duplex intact. Then, these intact P1 duplexes are extended along 3'-terminal through Vent (exo-) DNA polymerase to generate dsDNA, which is recognized and nicked at the recognition sites by Nt.BstNBI, releasing two copies of primer X. Primer X hybridizes with X' at the amplification template T1 (X'-Y'-X') and then serves as primers to trigger the exponential amplification reaction (EXPAR). The point of inflection (POI) values of real-time fluorescence curves is linearly correlated with the logarithm of M.SssI MTase concentration in the range of 0.125 [Formula: see text] 8 U mL-1 with a low detection limit of 0.034 U mL-1. In the absence of M.SssI, P1 duplexes are cut by HpaII and separated into ssDNA under the executed temperature of EXPAR and thus unable to trigger the amplification. The strategy provides good selectivity against other types of MTases and protein and is able to detect M.SssI activity in human serum. Furthermore, the analytical method has the generality and can be extended to the analysis of other types of DNA MTases.

Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it

IntroductionIndocyanine green (ICG) quantification and assessment by machine learning (ML) could discriminate tissue types through perfusion characterisation, including delineation of malignancy. Here, we detail the important challenges overcome before effective clinical validation of such capability in a prospective patient series of quantitative fluorescence angiograms regarding primary and secondary colorectal neoplasia.MethodsICG perfusion videos from 50 patients (37 with benign (13) and malignant (24) rectal tumours and 13 with colorectal liver metastases) of between 2- and 15-min duration following intravenously administered ICG were formally studied (clinicaltrials.gov: NCT04220242). Video quality with respect to interpretative ML reliability was studied observing practical, technical and technological aspects of fluorescence signal acquisition. Investigated parameters included ICG dosing and administration, distance–intensity fluorescent signal variation, tissue and camera movement (including real-time camera tracking) as well as sampling issues with user-selected digital tissue biopsy. Attenuating strategies for the identified problems were developed, applied and evaluated. ML methods to classify extracted data, including datasets with interrupted time-series lengths with inference simulated data were also evaluated.ResultsDefinable, remediable challenges arose across both rectal and liver cohorts. Varying ICG dose by tissue type was identified as an important feature of real-time fluorescence quantification. Multi-region sampling within a lesion mitigated representation issues whilst distance–intensity relationships, as well as movement-instability issues, were demonstrated and ameliorated with post-processing techniques including normalisation and smoothing of extracted time–fluorescence curves. ML methods (automated feature extraction and classification) enabled ML algorithms glean excellent pathological categorisation results (AUC-ROC > 0.9, 37 rectal lesions) with imputation proving a robust method of compensation for interrupted time-series data with duration discrepancies.ConclusionPurposeful clinical and data-processing protocols enable powerful pathological characterisation with existing clinical systems. Video analysis as shown can inform iterative and definitive clinical validation studies on how to close the translation gap between research applications and real-world, real-time clinical utility.

Transient fluorescence with a single trapped ion

In this paper, we present a method to measure transient fluorescent dynamics with single trapped ions in a Paul trap. We use 40Ca+ ions that exhibit a Λ-type three-level system and measure the characteristic optical pumping times between the ground S1/2 and the meta-stable D3/2 levels. We prepare one of these states and then pump it to the opposite via the excited P1/2 state. By measuring the scattered photons of the ion, we retrieve transient curves of the atomic fluorescence. These curves provide fundamental information about the atomic system, such as branching fractions and excited-state lifetimes, as well as experimental parameters like the efficiency of the detection system and the saturation parameter of one of the transitions. Finally, we study the time-dependent fluorescence as a function of optical power and detuning of the lasers and find a very good agreement with simulating the dynamics via a three-level open quantum system through a set of optical Bloch equations. Being able to record time-dependent fluorescence is of particular interest as it contains information about the temperature, cooling, and heating dynamics of the ion.

Potential Role of Low-Molecular-Weight Dioxolanes as Adjuvants for Glyphosate-Based Herbicides Using Photosystem II as an Early Post-Treatment Determinant.

Pesticide use cannot be completely abandoned in modern agriculture. Among agrochemicals, glyphosate is one of the most popular and, at the same time, most divisive herbicide. Since the chemicalization of agriculture is detrimental, various attempts are being made to reduce it. Adjuvants-substances that increase the efficiency of foliar application-can be used to reduce the amount of herbicides used. We propose low-molecular-weight dioxolanes as adjuvants for herbicides. These compounds quickly convert to carbon dioxide and water and do not harm plants. The aim of this study was to evaluate the efficacy of RoundUp® 360 Plus supported by three potential adjuvants: 2,2-dimethyl-1,3-dioxolane (DMD), 2,2,4-trimethyl-1,3-dioxolane (TMD), and (2,2-dimethyl-1,3-dioxan-4-yl)methanol (DDM), on a common weed species Chenopodium album L., under greenhouse conditions. Chlorophyll a fluorescence parameters and analysis of the polyphasic fluorescence (OJIP) curve, which examines changes in the photochemical efficiency of photosystem II, were used to measure plant sensitivity to glyphosate stress and verified the efficacy achieved by tested formulations. The effective dose (ED) values obtained showed that the weed tested was sensitive to reduced doses of glyphosate, with 720 mg/L needed to achieve 100% effectiveness. Compared to the glyphosate assisted with DMD, TMD, and DDM, ED was reduced by 40%, 50%, and 40%, respectively. The application of all dioxolanes at a concentration equal to 1 vol.% significantly enhanced the herbicide's effect. Our study showed that for C. album there was a correlation between the change in OJIP curve kinetics and the applied dose of glyphosate. By analyzing the discrepancies in the curves, it is possible to show the effect of different herbicide formulations with or without dioxolanes at an early stage of its action, thus minimizing the time for testing new substances as adjuvants.

Photoisomerization of linear merocyanines in salt solutions

AbstractThe trans‐cis isomerization in the excited state of linear merocyanine L‐Mero4 and phenyl substituted linear merocyanine P‐L‐Mero4 in salt solution and in ionic liquid was investigated using frequency upconversion measurements. Strontium chloride and cesium iodide were added to solvent dimethyl sulfoxide (DMSO) and dimethylformamide (DMF) to vary the ionic strength. The time‐resolved fluorescence curves of merocyanines displayed multiple exponential decay behavior. The second temporal component with time constant τ2 ≈ 2.8 (11) ps of L‐Mero4 (P‐L‐Mero4) in DMSO was assigned to the duration to reach the isomerization equilibrium between the trans and the twisted conformers. The τ2 increased at higher salt concentrations and was explained by the attachment of salt ions on the polar excited merocyanines decelerating the isomerization rate. The rotational correlation time constants obtained from the anisotropy decay of fluorescence were 360 and 240 ps in neat DMSO for L‐Mero4 and P‐L‐Mero4, respectively, and they increased to 790 and 450 ps in the most concentrated SrCl2. Using Perrin relation, we estimated the increase in the rotating volume at [SrCl2] = 536 mM, revealing ≈15 SrCl2 molecules surrounding L‐Mero4 and 7 SrCl2 on P‐L‐Mero4. The experimental data indicated that the ion–molecule interaction was stronger with SrCl2 and on L‐Mero4 than on P‐L‐Mero4.

Photosynthetic activity and metabolic profiling of bread wheat cultivars contrasting in drought tolerance.

The rapid increase in population growth under changing climatic conditions causes drought stress, threatening world food security. The identification of physiological and biochemical traits acting as yield-limiting factors in diverse germplasm is pre-requisite for genetic improvement under water-deficit conditions. The major aim of the present study was the identification of drought-tolerant wheat cultivars with a novel source of drought tolerance from local wheat germplasm. The study was conducted to screen 40 local wheat cultivars against drought stress at different growth stages. Barani-83, Blue Silver, Pak-81, and Pasban-90 containing shoot and root fresh weight >60% of control and shoot and root dry weight >80% and 70% of control, respectively, P (% of control >80 in shoot and >88 in root), K+ (>85% of control), and quantum yield of PSII > 90% of control under polyethylene glycol (PEG)-induced drought stress at seedling stage can be considered as tolerant, while more reduction in these parameters make FSD-08, Lasani-08, Punjab-96, and Sahar-06 as drought-sensitive cultivars. FSD-08 and Lasani-08 could not maintain growth and yield due to protoplasmic dehydration, decreased turgidity, cell enlargement, and cell division due to drought treatment at adult growth stage. Stability of leaf chlorophyll content (<20% decrease) reflects photosynthetic efficiency of tolerant cultivars, while ~30 µmol/g fwt concentration of proline, 100%-200% increase in free amino acids, and ~50% increase in accumulation of soluble sugars were associated with maintaining leaf water status by osmotic adjustment. Raw OJIP chlorophyll fluorescence curves revealed a decrease in fluorescence at O, J, I, and P steps in sensitive genotypes FSD-08 and Lasani-08, showing greater damage to photosynthetic machinery and greater decrease in JIP test parameters, performance index (PIABS), maximum quantum yield (Fv/Fm) associated with increase in Vj, absorption (ABS/RC), and dissipation per reaction center (DIo/RC) while a decrease in electron transport per reaction center (ETo/RC). During the present study, differential modifications in morpho-physiological, biochemical, and photosynthetic attributes that alleviate the damaging effects of drought stress in locally grown wheat cultivars were analyzed. Selected tolerant cultivars could be explored in various breeding programs to produce new wheat genotypes with adaptive traits to withstand water stress.

Preparation, structure and luminescent properties of P2O5–Gd2O3–Ga2O3–NaF–ZnO glasses co-doped with Tb3+ and Sm3+

White light-emitting diodes have been intensively explored as a technique of green energy-conversion in recent decades. In this work, a unique Tb3+/Sm3+ co-doped P2O5–Gd2O3–Ga2O3–NaF–ZnO glass consisting of Q0, Q1 and Q2 units was successfully synthesized. The DSC curves demonstrated that the glass stability gradually deteriorated with the increase of Sm3+ contents. The emission spectra exhibited the energy transfer from Dy3+ to Tb3+ ions, and the energy transfer efficiency and probability grew monotonously with the increase of Sm3+ contents. With the help of temperature-dependent emission spectra, the glasses were validated to be thermally stable. The fluorescence curves and Inokuti-Hirayama model demonstrated that the dominant mechanism in the energy transfer process was electric dipole-quadrupole interaction. In addition. the white-light emission with suitable chromaticity coordinates and CCTs could be obtained by adjusting the contents of the sensitizer and activator for PGGNZ glasses. All investigations revealed the potential application of Tb3+/Sm3+ co-doped glasses in optical device applications.