Fluctuations In Abundance Research Articles

Phenotypic heterogeneity follows a growth-viability tradeoff in response to amino acid identity

In their natural environments, microorganisms mainly operate at suboptimal growth conditions with fluctuations in nutrient abundance. The resulting cellular adaptation is subject to conflicting tasks: growth or survival maximisation. Here, we study this adaptation by systematically measuring the impact of a nitrogen downshift to 24 nitrogen sources on cellular metabolism at the single-cell level. Saccharomyces lineages grown in rich media and exposed to a nitrogen downshift gradually differentiate to form two subpopulations of different cell sizes where one favours growth while the other favours viability with an extended chronological lifespan. This differentiation is asymmetrical with daughter cells representing the new differentiated state with increased viability. We characterise the metabolic response of the subpopulations using RNA sequencing, metabolic biosensors and a transcription factor-tagged GFP library coupled to high-throughput microscopy, imaging more than 800,000 cells. We find that the subpopulation with increased viability is associated with a dormant quiescent state displaying differences in MAPK signalling. Depending on the identity of the nitrogen source present, differentiation into the quiescent state can be actively maintained, attenuated, or aborted. These results establish amino acids as important signalling molecules for the formation of genetically identical subpopulations, involved in chronological lifespan and growth rate determination.

Postbiotics from Saccharomyces cerevisiae fermentation stabilize microbiota in rumen liquid digesta during grain-based subacute ruminal acidosis (SARA) in lactating dairy cows

BackgroundSubacute ruminal acidosis (SARA) is a common metabolic disorder of high yielding dairy cows, and it is associated with dysbiosis of the rumen and gut microbiome and host inflammation. This study evaluated the impact of two postbiotics from Saccharomyces cerevisiae fermentation products (SCFP) on rumen liquid associated microbiota of lactating dairy cows subjected to repeated grain-based SARA challenges. A total of 32 rumen cannulated cows were randomly assigned to 4 treatments from 4 weeks before until 12 weeks after parturition. Treatment groups included a Control diet or diets supplemented with postbiotics (SCFPa, 14 g/d Original XPC; SCFPb-1X, 19 g/d NutriTek; SCFPb-2X, 38 g/d NutriTek, Diamond V, Cedar Rapids, IA, USA). Grain-based SARA challenges were conducted during week 5 (SARA1) and week 8 (SARA2) after parturition by replacing 20% DM of the base total mixed ration (TMR) with pellets containing 50% ground barley and 50% ground wheat. Total DNA from rumen liquid samples was subjected to V3–V4 16S rRNA gene amplicon sequencing. Characteristics of rumen microbiota were compared among treatments and SARA stages.ResultsBoth SARA challenges reduced the diversity and richness of rumen liquid microbiota, altered the overall composition (β-diversity), and its predicted functionality including carbohydrates and amino acids metabolic pathways. The SARA challenges also reduced the number of significant associations among different taxa, number of hub taxa and their composition in the microbial co-occurrence networks. Supplementation with SCFP postbiotics, in particular SCFPb-2X, enhanced the robustness of the rumen microbiota. The SCFP supplemented cows had less fluctuation in relative abundances of community members when exposed to SARA challenges. The SCFP supplementation promoted the populations of lactate utilizing and fibrolytic bacteria, including members of Ruminococcaceae and Lachnospiraceae, and also increased the numbers of hub taxa during non-SARA and SARA stages. Supplementation with SCFPb-2X prevented the fluctuations in the abundances of hub taxa that were positively correlated with the acetate concentration, and α- and β-diversity metrics in rumen liquid digesta.ConclusionsInduction of SARA challenges reduced microbiota richness and diversity and caused fluctuations in major bacterial phyla in rumen liquid microbiota in lactating dairy cows. Supplementation of SCFP postbiotics could attenuate adverse effects of SARA on rumen liquid microbiota.

Manipulation of feeding patterns in high fat diet fed rats improves microbiota composition dynamics, inflammation and gut-brain signaling

Chronic consumption of high fat (HF) diets has been shown to increase meal size and meal frequency in rodents, resulting in overeating. Reducing meal frequency and establishing periods of fasting, independently of caloric intake, may improve obesity-associated metabolic disorders. Additionally, diet-driven changes in microbiota composition have been shown to play a critical role in the development and maintenance of metabolic disorders. In this study, we used a pair-feeding paradigm to reduce meal frequency and snacking episodes while maintaining overall intake and body weight in HF fed rats. We hypothesized that manipulation of feeding patterns would improve microbiota composition and metabolic outcomes. Male Wistar rats were placed in three groups consuming either a HF, low fat diet (LF, matched for sugar), or pair-fed HF diet for 7 weeks (n = 11–12/group). Pair-fed animals received the same amount of food consumed by the HF fed group once daily before dark onset (HF-PF). Rats underwent oral glucose tolerance and gut peptide cholecystokinin sensitivity tests. Bacterial DNA was extracted from the feces collected during both dark and light cycles and sequenced via Illumina MiSeq sequencing of the 16S V4 region. Our pair-feeding paradigm reduced meal numbers, especially small meals in the inactive phase, without changing total caloric intake. This shift in feeding patterns reduced relative abundances of obesity-associated bacteria and maintained circadian fluctuations in microbial abundances. These changes were associated with improved gastrointestinal (GI) function, reduced inflammation, and improved glucose tolerance and gut to brain signaling. We concluded from these data that targeting snacking may help improve metabolic outcomes, independently of energy content of the diet and hyperphagia.

Taylor's power law for freshwater fishes: Functional traits beyond statistical inevitability.

Taylor's power law (TPL) describes the expected range of parameters of the mean-variance scaling relationship and has been extensively used in studies examining temporal variations in abundance. Few studies though have focused on biological and ecological covariates of TPL, while its statistical inherences have been extensively debated. In the present study, we focused on species-specific features (i.e. functional traits) that could be influential to temporal TPL. We combined field surveys of 180 fish species from 972 sites varying from small streams to large rivers with data on 31 ecological traits describing species-specific characteristics related to three main niche dimensions (trophic ecology, life history, and habitat use). For each species, the parameters of temporal TPL (intercept and slope) were estimated from the log-log mean-variance relationships while controlling for spatial dependencies and biological covariates (species richness and evenness). Then, we investigated whether functional traits explained variations in TPL parameters. Differences in TPL parameters among species were explained mostly by life history and environmental determinants, especially TPL slope. Life history was the main determinant of differences in TPL parameters and thereby aggregation patterns, with traits related to body size being the most influential, thus showing a high contrast between small-sized species with short lifespans and large-bodied migratory fishes, even after controlling for phylogenetic resemblances. We found that life history traits, especially those related to body size, mostly affect TPL and, as such, can be determinants of temporal variability of fish populations. We also found that statistical effects and phylogenetic resemblances are embedded in mean-variance relationships for fish, and that environmental drivers can interact with ecological characteristics of species in determining temporal fluctuations in abundance.

Mesoscale and climate environmental variability drive krill community changes in the Humboldt Current System

Euphausiids (or “krill”) play a crucial role in the food webs of eastern boundary upwelling systems. Their inter-specific predatory interactions with ecologically and commercially important species highlights the importance of understanding krill variability at different temporal and spatial scales. In the Humboldt Current System (HCS), few studies have addressed the spatio-temporal variability of krill communities and their link with climate and local environmental drivers. We studied the patterns and variability of euphausiid diversity in the coastal area off northern Chile, using zooplankton and CTD-O data, and satellite environmental data from the falls and springs of 2010–2017. The community showed low diversity and evenness, with the endemic species Euphausia mucronata being the most abundant. The environmental variance showed 2 main modes of variability: (1) upwelling-associated changes in the depth of the oxygen minimum zone (OMZ) and in temperature, and (2) interannual variability in salinity, associated with ENSO-driven water-mass changes. The diversity indices and community structure showed large fluctuations in the cross-shore direction, and with latitude. The general pattern showed higher diversity offshore and southward, with few species in the low temperature, shallow OMZ conditions of the coastal band. During the 2013 and 2016 marine heatwaves and the 2015-2016 El Niño, the Subtropical Water Mass was advected southward, causing an increase in salinity and temperature, and a decrease in total krill abundance. However, ENSO variability did not significantly affect the species composition. The changes in community structure were caused by fluctuations in species abundance rather than species presence, as the most abundant species dominated the community throughout the study period. These results indicate that the krill communities of the HCS are highly resilient to climate perturbations, with upwelling-associated gradients being the primary source of variability for euphausiid populations in this ecosystem.

Host lifestyle and parasite interspecific facilitation mediate co‐infection in a species‐poor host–parasite system

Despite their important ecological role, questions remain on mechanisms structuring parasite assemblages. We present an endemic and species‐poor parasite–host system of two species of clupeid fishes Limnothrissa miodon, Stolothrissa tanganicae) and two species of monogenean parasites (Kapentagyrus, Dactylogyridae) from Lake Tanganyika as a model to study parasite distribution patterns and co‐infection dynamics in nature. We modelled spatiotemporal dynamics of parasite–host interaction using infection data along the north–south axis of Lake Tanganyika (660 km) over the course of two seasons and four years (1730 fish, 3710 parasites). We found temporal stability of parasite infection, which contrasts with previously reported seasonally driven fluctuations of fish host abundances. We found a difference in spatial structure between the parasite species which follows the contrasting dispersal pattern of their respective host species. On L. miodon, the host species that is infected by the two parasite species, we discovered a positive correlation with host body size for one parasite species, and a negative correlation for the other species. The apparent host‐size related replacement in the two parasite species infecting L. miodon contrasts with the beneficial influence that each of the parasite species has on the other. Parasites have been reported in previous studies to change habitat depending on host size/age. Differences in abundance and prevalence here reported between parasite species infecting the same host species related to the host body length further illustrate the parasites' dependence on changes in lifestyle of the host during its ontogenetic development. Also, possible mechanisms underlying the reported facilitation of infection are discussed. In conclusion, we show that in this closed, species‐poor system parasite infection dynamics are dependent on a combination of host mobility, host lifestyle changes over ontogenetic development, and interspecific interactions between parasites.

Long-Term Trends in Mosquito Vector Populations and Their Impact on Yellow Fever Outbreaks in Atlantic Forest Fragments of Rio De Janeiro, Brazil (2016-2021).

Among all living beings, mosquitoes account for the highest number of human fatalities. Our study aimed to determine mosquito egg abundance fluctuation from 2015 to 2020, in order to observe which years had the highest mosquito vector densities and whether they coincided with yellow fever virus outbreaks in both human and nonhuman primates. The study area included Atlantic Forest fragments in the state of Rio de Janeiro. Studies from the Diptera Laboratory at FIOCRUZ were selected and compared along a timeline period of the field collections. The highest peak in egg abundance from the analyzed studies was observed from 2016 to 2017 and from 2015 to 2016. The lowest egg abundance was during the collection periods from 2018 to 2019 and 2019 to 2020. The species with the highest abundance throughout all the periods of the studies analyzed was Haemagogus leucocelaenus, representing 87% of all epidemiological species identified. The species with the lowest abundance was Hg. Janthinomys, representing only 1%. Monitoring the population of mosquitoes is imperative for disease surveillance, as the rise in specimens of various vector species directly impacts the occurrence of yellow fever cases in both nonhuman primates and human populations.

Investigating population dynamics and evaluating damage incurred by Thripidae (Thysanoptera) species in citrus orchards of Northeastern Morocco: an exemplary analysis in Berkane

Thrips are significant pest of crops, vegetables, and fruiting trees, and various species of thrips can infest citrus at fruit formation as well as new leaf sprouts. Thrips presence and damage can significantly reduce the export value of fruits, making them a major concern for citrus growers. Field studies were conducted to investigate the biodiversity and abundance of citrus thrips on an early fruiter citrus cultivar in experimental and commercial orchards of Morocco. In this study, we investigated the abundance, economic importance, dynamics, and seasonal fluctuations of citrus thrips in relation to citrus phenology. We identified four species of thrips that infest citrus orchards, including Frankliniella occidentalis, Pezothrips kellyanus, Scirtothrips sp, and Aeolothrips sp. Our results showed that the quantitative peak of thrips occurred during the blooming stage, and that the number of thrips caught on sticky traps during bloom could be a suitable predictive method for estimating final fruit damage. The population dynamics of thrips species were found to depend on several biotic and abiotic factors, including temperature, rainfall, and chemical interventions. We also observed that some citrus varieties were more susceptible to thrips attacks than others, with Washington navel and Maroc late being the most infested orchards with infestation rates of 32% and 24%, respectively. Our findings provide important insights into the abundance, economic importance, and seasonal fluctuations of citrus thrips, which can inform the development of effective control strategies to mitigate their damage in citrus orchards.

Dynamics of microplastic abundance under tidal fluctuation in Musi estuary, Indonesia

Tidal dynamics contribute to fluctuations in microplastic abundance (MPs). This is the first study to characterize MPs under the influence of tidal fluctuations in the Musi River Estuary. MPs samples were collected during flood and ebb tides at 10 research stations representing the inner, middle and outer parts of the Musi River Estuary. MPs were extracted to identify the shape, color and size. MP abundances were 467.67 ± 127.84 particles/m3 during flood tide and 723.67 ± 112.05 particles/m3 during ebb tide. The concentration of MPs in the outer zone of the estuary (ocean) was detected to be higher than in the inner zone of the estuary (river). The MPs found were dominated by black color, film shape and size 101–250 μm. A greater abundance of MPs at ebb tide than at flood tide implies that the Musi Estuary's largest source of emissions is discharge from the river.

Variations of Heavy Ions in Interplanetary Shock Driven by Interplanetary Coronal Mass Ejections and Stream Interaction Regions

In the solar wind, the fluctuation of heavy ion abundance serves as a crucial physical metric. This not only mirrors the attributes of the solar wind’s originating solar region but also signifies its influence on Earth’s magnetosphere. Utilizing data from the Advanced Composition Explorer satellite, this investigation scrutinizes heavy ion variations in stream interaction region (SIR)- and interplanetary coronal mass ejection (ICME)-driven shocks. We further delineate the disparities in heavy ion fluctuations between these two types of interplanetary shocks across diverse solar activity cycles. Our findings reveal that ICME-driven shocks typically manifest elevated shock velocities and magnetic field strengths relative to their SIR-driven counterparts. Additionally, heavy ion abundance ratios, such as C6+/O4+, O7+/O6+, He/O, Si/O, and Fe/O, are consistently higher in ICME-driven shocks than in SIR-driven shocks. During varying solar activity cycles, these ratios surge postarrival of ICME-driven shocks. At solar maximum, these elevated ratios persist, whereas they revert to baseline levels swiftly during solar minimum. For SIR-driven shocks, the alteration in heavy ion abundance ratios is comparatively subdued, yet a noteworthy correlation with the solar activity cycle is evident.

Simulated reproductive allocation to fisheries-induced evolution among small yellow croaker populations in the Yellow and Bohai Seas

Fishery-induced evolution (FIE) affects the body size and reproduction of offspring, resulting in feedback regulation of fish survival and stock recruitment. Small yellow croaker (Larimichthys polyactis) is a species of high ecological and commercial importance in the Yellow and Bohai Seas, with large fluctuations in abundance linked to overfishing and environmental changes in recent decades. To better understand the maturation size and age, threshold reproduction cost, and energy trade-offs of small yellow croaker under environmental changes (e.g. conditions) and human impacts (e.g. fishing) in the Yellow and Bohai Seas, we utilised a two-pool uncertain growth model containing the growth threshold of reproductive energy and reproductive energy cost. The results showed that for growth, maturation age, and reproduction under the baseline scenario based on field survey data from the 1950 s, when resources for small yellow croaker were underexploited, the average age was 5–6 years old and the average body length was approximately 220 mm. As the model parameters for fishing pressure and condition mortality increased, small yellow croaker tended to mature earlier, had a smaller body size, and allocated more energy to reproduction, resulting in higher population fecundity but shorter lifespan. Higher reproductive costs led to a greater proportion of reproductive energy being allocated during the spawning period, resulting in an older age of sexual maturity, shorter lifespan for spawning populations, and poor physical conditions, resulting in higher post-reproductive mortality and a limited capacity for stock recruitment. The key life-history traits of small yellow croaker, including maturity age, mean age of the population, age-specific body weight, and spawn production at different age stages, can change under different conditions. The model represents the main life history strategies and energy allocation characteristics of small yellow croaker. The simulated age and body size were within the observed range and the predicted fecundity aligned with the observed values. This study provides a prediction tool for protecting the spawning and recruitment of small yellow croaker and establishes a biological reference for sustainable management of small yellow croaker populations in the Yellow and Bohai Seas in the future.

Effects of winter weather conditions on abundance fluctuations in a nest box breeding population of the Common Merganser Mergus merganser in the southern coast of Finland

Effects of winter weather conditions on abundance fluctuations in a nest box breeding population of the Common Merganser Mergus merganser in the southern coast of Finland

Seasonal variations of a coastal fish community in relation to environmental parameters - A case study of the Sylt-Rømø Bight, southeastern North Sea

The Wadden Sea is a transition area between land, rivers, and the North Sea. It is of great ecological importance for a wide range of fish species that use it in the course of their life cycle for various purposes. It is a highly dynamic environment and is subject to strong seasonal patterns and annual variations in abiotic conditions. The Sylt-Rømø Bight (SRB) is a semi-enclosed tidal basin in the northern Wadden Sea between the islands of Sylt (Germany) and Rømø (Denmark). Monthly monitoring data of juvenile fish taken in the SRB from 2007 to 2019 were analyzed to determine the changes in species composition in comparison to previous monitoring programs (1989–1995). The long-term trends, common patterns, and potential effects of environmental parameters (sea surface temperature (SST), salinity, chlorophyll a, and the North Atlantic Oscillation (NAO) winter indices) were determined. In total, 55 species were recorded and only 22 of these together accounted for more than 95% of the total abundance for the entire monitoring. Results showed a changed species composition as we did not find two boreal, one Lusitanian, and one circum-temperate species recorded in the previous programs. Instead, one boreal, six Lusitanian, and one Atlantic species were observed for the first time. The fish community was dominated by high seasonal fluctuations of abundance with either dome-shaped, increasing, or decreasing trends. Dynamic Factor Analysis (DFA) partitioned the fish community into three seasonal assemblages based on SST preferences. Redundancy Analysis (RDA) revealed that environmental parameters explained 29 % of the variations in the fish community. These variances were partly a result of the spring immigration of Lusitanian species and the emigration of boreal species and vice versa in autumn. The absence of four previously reported species and the addition of eight new species support the hypothesis that warm-adapted species are increasing in the Wadden Sea. The inclusion of these seasonal variations into conservation and management practices is critical to the sustainable management of marine and coastal ecosystems covering spawning, nursery, and feeding grounds.

Effect of the consumption of brazzein and monellin, two recombinant sweet-tasting proteins, on rat gut microbiota.

Sweet-tasting proteins (SPs) are proteins of plant origin initially isolated from tropical fruits. They are thousands of times sweeter than sucrose and most artificial sweeteners. SPs are a class of proteins capable of causing a sweet taste sensation in humans when interacting with the T1R2/T1R3 receptor. SP thaumatin has already been introduced in the food industry in some countries. Other SPs, such as monellin and brazzein, are promising products. An important stage in researching SPs, in addition to confirming the absence of toxicity, mutagenicity, oncogenicity, and allergenic effects, is studying their influence on gut microbiota. In this paper we describe changes in the composition of rat gut microbiota after six months of consuming one of two recombinant SPs-brazzein or monellin. A full length 16S gene sequencing method was used for DNA library barcoding. The MaAsLin2 analysis results showed noticeable fluctuations in the relative abundances of Anaerocella delicata in brazzein-fed rat microbiota, and of Anaerutruncus rubiinfantis in monellin-fed rat microbiota, which, however, did not exceed the standard deviation. The sucrose-fed group was associated with an increase in the relative abundance of Faecalibaculum rodentium, which may contribute to obesity. Overall, prolonged consumption of the sweet proteins brazzein and monellin did not significantly change rat microbiota and did not result in the appearance of opportunistic microbiota. This provides additional evidence for the safety of these potential sweeteners.

Interacting effects of fire and hydroclimate on oak and beech community prevalence in the southern Great Lakes region

Abstract Rising temperatures, increasing hydroclimate variability and intensifying disturbance regimes increase the risk of rapid ecosystem conversions. We can leverage multi‐proxy records of past ecosystem transformations to understand their causes and ecosystem vulnerability to rapid change. Prior to Euro‐American settlement, northern Indiana was a mosaic of prairie, oak‐dominated forests/woodlands and beech‐dominated hardwood forests. This heterogeneity, combined with well‐documented but poorly understood past beech population declines, make this region ideal for studying the drivers of ecosystem transformations. Here, we present a new record from Story Lake, IN, with proxies for vegetation composition (pollen), fire (charcoal) and beech intrinsic water use efficiency (δ13C of beech pollen; δ13Cbeech). Multiple proxies from the same core enable clear establishment of lead–lag relationships. Additionally, δ13Cbeech enables direct comparisons between beech population abundance and physiological responses to changing environments. We compare Story Lake to a nearby lake‐level reconstruction and to pollen records from nearby Pretty and Appleman Lakes and the distal Spicer Lake, to test hypotheses about synchrony and the spatial scale of governing processes. The 11.7 ka sediment record from Story Lake indicates multiple conversions between beech‐hardwood forest and oak forest/woodland. Beech pollen abundances rapidly increased between 7.5 and 7.1 ka, while oak declined. Oak abundances increased after 4.6 ka and remained high until 2.8 ka, indicating replacement of mesic forests by oak forest/woodland. At 2.8 ka, beech abundances rapidly increased, indicating mesic forest reestablishment. Beech and oak abundances correlate with charcoal accumulation rates but beech abundance is not correlated with δ13Cbeech. Fluctuations in beech abundances are synchronous among Story, Appleman and Pretty Lakes, but asynchronous between Story and Spicer Lakes, suggesting regulation by local‐scale vegetation‐fire‐climate feedbacks and secondarily by regional‐scale drivers. Holocene forest composition and fire dynamics appear to be closely co‐regulated and may be affected by local to regional climate variations. The importance of extrinsic drivers and positive/negative feedbacks changes over time, with higher ecoclimate sensitivity before 2.8 ka and greater resilience afterwards. Synthesis: Overall, oak‐ and beech‐dominated ecosystems were highly dynamic over the Holocene, with multiple ecosystem conversions driven by shifting interactions among vegetation, hydroclimate and fire regime.

Host plant-mediation of viral transmission and its consequences for a native butterfly.

Pathogens play a key role in insect population dynamics, contributing to short-term fluctuations in abundance as well as long-term demographic trends. Two key factors that influence the effects of entomopathogens on herbivorous insect populations are modes of pathogen transmission and larval host plants. In this study, we examined tritrophic interactions between a sequestering specialist lepidopteran, Euphydryas phaeton, and a viral pathogen, Junonia coenia densovirus, on its native host plant, Chelone glabra, and a novel host plant, Plantago lanceolata, to explore whether host plant mediates viral transmission, survival, and viral loads. A two-factor factorial experiment was conducted in the laboratory with natal larval clusters randomly assigned to either the native or novel host plant and crossed with either uninoculated controls or viral inoculation (20% of individuals in the cluster inoculated). Diapausing clusters were overwintered in the laboratory and checked weekly for mortality. At the end of diapause, all surviving individuals were reared to adulthood to estimate survivorship. All individuals were screened to quantify viral loads, and estimate horizontal transmission postmortem. To test for vertical transmission, adults were mated, and the progeny were screened for viral presence. Within virus-treated groups, we found evidence for both horizontal and vertical transmission. Larval clusters reared on the native host plant had slightly higher horizontal transmission. Survival probability was lower in clusters feeding on the native host plant, with inoculated groups reared on the native host plant experiencing complete mortality. Viral loads did not differ by the host plant, although viral loads decreased with increased sequestration of secondary compounds on both host plants. Our results indicate that the use of a novel host plant may confer fitness benefits in terms of survival and reduced viral transmission when larvae feeding on it are infected with this pathogen, supporting hypotheses of potential evolutionary advantages of a host range expansion in the context of tritrophic interactions.

Temporal variation and spatial factors affecting zooplankton communities in freshwater rock pools

Most ecological studies have focused on one snapshot in a single location and the same taxonomic group. However, relatively few studies have explored different taxonomic groups over multiple periods, particularly in ephemeral Neotropical ecosystems. This study investigates the seasonal dynamics of zooplankton communities and their responses to environmental variables in temporary pools in the Seasonally Dry Forest Ecosystem, Pernambuco, Brazil. We examined the seasonal fluctuations in species abundance, diversity, and evenness of Cladocera, Copepoda, and Rotifera in five temporary rock pools. Although these pools are meters apart, they vary considerably in size and drought sensitivity, leading to distinct seasonal dynamics mediated by water availability. We asked (i) how do species abundance, diversity, and evenness vary seasonally? (ii) Do these seasonal shifts differ between Cladocera, Copepoda, and Rotifera? And (iii) How do water environmental variables and spatial distance of pools influence zooplankton species composition? We hypothesized that Cladocera and Copepoda are positively affected by the rainy season, but Rotifera is mostly common in the dry season. Our findings underscore seasonality as the primary driver influencing the abundance and composition of zooplankton communities. We observed higher abundance of Cladocera and Rotifera during the post-rainy season, but Copepoda was dominant in the rainy season, leading to a strong seasonal variation in species evenness. These differences among groups highlight the importance of considering biological differences when understanding the ecological drivers of temporary freshwater ecosystems.

Fluctuations in abundance of the striped venus clam Chamelea gallina in the southern Adriatic Sea (Central Mediterranean Sea): knowledge, gaps and insights for ecosystem-based fishery management

An assessment on the fluctuations in abundance of the striped venus clam (Chamelea gallina) in the southern Adriatic Sea (Central Mediterranean Sea), and the northern Gargano area, has been conducted through both historical information and recent data from monitoring surveys during the period 1997–2019. Production trends, conditions of the commercial stock biomass, and depth distribution pattern of juveniles and commercial sizes were analysed testing temporal differences. Moreover, the exploitation of the clam beds and recruitment events were investigated in 2018–2019. Changes in abundance were analysed using non-parametric tests for both juvenile (length class, LC < 22 mm) and commercial (LC ≥ 22 mm) fractions. Hydrodynamic changes, temperature and salinity variations were explored using a 3D hydrodynamic numerical model (MIKE 3 FM-HD) and statistical analysis, as well as changes in benthic assemblages impacted by hydraulic dredges were investigated through PERMANOVA and other multivariate analysis.The results showed a temporal decline of production and biomass of C. gallina during the 1997–2019 period, and a regression of the depth limit in the clams’ distribution towards shallower waters. A significant reduction in juveniles was observed during 2018–2019 with a very limited recruitment. The fishing exploitation showed high impacts on the commercial stock and benthic assemblages in the summer of 2018. Overall, water currents were predominantly directed offshore in 2018, during the C. gallina spawning period. This could affect the larval dispersal and settlement on unsuitable bottoms. Anomalies in temperature (high peaks in August 2018, > 28 °C) and salinity (low values in spring 2018, < 37 PSU) could have induced stress and mortality events on the entire clam bed in the study area. This first study highlights the need to integrate environmental information in the assessment of commercial stocks of clams in the Adriatic Sea, to better understand climate change effects on the fluctuations and to support effective ecosystem-based fishery management.

Chaotic turnover of rare and abundant species in a strongly interacting model community

The composition of ecological communities varies not only between different locations but also in time. Understanding the fundamental processes that drive species toward rarity or abundance is crucial to assessing ecosystem resilience and adaptation to changing environmental conditions. In plankton communities in particular, large temporal fluctuations in species abundances have been associated with chaotic dynamics. On the other hand, microbial diversity is overwhelmingly sustained by a "rare biosphere" of species with very low abundances. We consider here the possibility that interactions within a species-rich community can relate both phenomena. We use a Lotka-Volterra model with weak immigration and strong, disordered, and mostly competitive interactions between hundreds of species to bridge single-species temporal fluctuations and abundance distribution patterns. We highlight a generic chaotic regime where a few species at a time achieve dominance but are continuously overturned by the invasion of formerly rare species. We derive a focal-species model that captures the intermittent boom-and-bust dynamics that every species undergoes. Although species cannot be treated as effectively uncorrelated in their abundances, the community's effect on a focal species can nonetheless be described by a time-correlated noise characterized by a few effective parameters that can be estimated from time series. The model predicts a nonunitary exponent of the power-law abundance decay, which varies weakly with ecological parameters, consistent with observation in marine protist communities. The chaotic turnover regime is thus poised to capture relevant ecological features of species-rich microbial communities.

Ostracods from the Cretaceous–Palaeogene boundary at El Matuasto Section, Neuquén Basin, Argentina: taxonomy, palaeoecological and palaeobiogeographical inferences

AbstractThis work presents a taxonomic, palaeoecological and palaeobiogeographical study of the ostracod fauna around the Cretaceous–Palaeogene boundary from the El Matuasto section, Neuquén Basin, Argentina. The analysis of 64 samples resulted in the recovery of 82 marine ostracod species, of which four are new: Hemiparacytheridea condilomata, Paramunseyella stictus, Hysterocythereis acuminata and Aleisocythereis? picnus. In addition, the genera Sapucariella, Monoceratina, Aracajuia, Microceratina and Pelecocythere are reported for the first time from the Neuquén Basin. Palaeoecological inferences indicate fluctuations in abundance and diversity, occurring alongside environmental change from an inner to medium shelf during the Maastrichtian and to an outer shelf in the Danian. The Maastrichtian fauna was less abundant than that in the Danian, which shows a rapid recovery after the Cretaceous–Palaeogene boundary. During the Danian, a small interval also shows a sudden decrease in abundance and diversity that could potentially be related to the Dan‐C2 event. In addition, the described genera and species in this study suggest a strong palaeobiogeographical affinity with the Paraíba Basin, northeastern Brazil.