The utilization of microalgae for wastewater treatment presents a promising and cost-effective solution due to their ability to remove pollutants while simultaneously synthesizing biomass from wastewater nutrients. This research identified a novel strain of Chlorella sorokiniana and investigated its growth ability in flax retting wastewater (FRW), as well as its potential for FRW treatment. Chlorella sorokiniana HDMA-16 was inoculated into FRW, both with and without additional nutrient supplementation. The biomass, lipid content, and fatty acid profile of Chlorella sorokiniana HDMA-16 were determined, along with the changes in total nitrogen (TN), ammonia nitrogen (NH4+-N), total phosphorus (TP), and chemical oxygen demand (COD) in FRW. The results revealed that Chlorella sorokiniana HDMA-16 exhibited moderate growth in FRW without the need for additional nutrients. The strain achieved maximum biomass and lipid productivity levels of 785.7 mg L−1 and 151.5 RFU L−1 d−1. The lipid produced by Chlorella sorokiniana HDMA-16 displayed a favorable fatty acid profile, making the strain a potential candidate for the synthesis of by-products such as biodiesel. The removal rates of NH4+-N, TP, and COD in FRW reached a maximum of 26.86 %, 99.59 %, and 29.39 %. This study is significant in that it shows that the newly discovered Chlorella sorokiniana HDMA-16 can thrive in FRW and effectively remove pollutants. These findings provide a novel approach for FRW treatment and the large-scale cultivation of microalgae, offering promising prospects for sustainable wastewater treatment and microalgae-based industries.