Environmental fungi become a potential Indoor Air Quality (IAQ) problem when adequate moisture and nutrients are present in building materials. Because of their potential to rapidly spread contamination throughout a building, ventilation system materials are of particular significance as potential microbial contamination sources. Current recommendations are to discard fibrous glass insulation that appears to be wet or moldy. Unfortunately, this advice is not always followed. Instead, cleaning is sometimes being used in buildings to remediate fibrous glass duct liner that is already contaminated with microbial growth. The objectives of this research program were to: 1) determine, under dynamic test conditions, whether fungal spore levels on heating, ventilating, and air-conditioning (HVAC) duct material surfaces could be substantially reduced by thorough vacuum cleaning, 2) evaluate whether subsequent fungal growth could be limited or contained by mechanical cleaning, and 3) provide data concerning the advisability of cleaning duct materials. The constant high relative humidity (RH) environment to which the test materials were exposed during this study was selected as a favorable growth environment that is frequently found in Southeastern United States HVAC systems. The results showed that, following cleaning, the levels of the two test fungi, A. versicolor and P. chrysogenum, recovered to preclean levels within 6 weeks. Therefore, mechanical cleaning by contact vacuuming alone was able to only temporarily reduce the surface fungal load. The current guidelines to discard contaminated materials should be followed.