An increase in arterial stiffness is causal factor of cardiovascular diseases. Habitual exercise improves arterial stiffness and has a protective effect against these diseases. However, not all individuals may benefit equally from exercise. These genetic variations in association with the regular exercise-induced improvement of arterial stiffness remain unclear. PURPOSE: To identify genetic variants, which influence individuals respond to regular exercise-induced improvement of arterial stiffness, using genome-wide association studies (GWAS) in Japanese adults. METHODS: 285 Japanese adults aged from 25 to 70, who were recruited from Nutrition and EXercise Intervention Study (NEXIS) totally enrolled 838 persons, participated in this study. Mean daily amount of physical activity for 14 days at >3 METs was measured by using triaxial accelerometry at both baseline and 1 year later. Also, arterial stiffness was assessed by carotid beta-stiffness with ultrasonography and tonometry. Active subjects (n=45), which has kept more than 5.1 METs*h/day (the highest quintile at baseline) at both baseline and 1 year measurements, were divided into two groups; high values of beta-stiffness (High-Stif) and low values of beta-stiffness (Low-Stif) based on the median value of beta-stiffness in each sex and decade. A GWAS between two groups was performed by Human660W-Quad BeadChip (illumina). RESULTS: There were no significant differences in age, sex, BMI, blood pressure and fasting blood glucose, triglyceride, and HDL-C concentrations between High-Stif and Low-Stif groups, whereas there was a significant difference in beta-stiffness (13.2±1.2 vs 7.0±0.4 AU, P<0.0001). The >550,000 genetic polymorphisms were analyzed by using JMP Genetics (SAS Institute), then 10 and 27 SNPs were significantly associated with the individual variation of regular exercise-induced improvement of arterial stiffness (genotype and allele frequency respectively, P<0.0001). These polymorphisms were located on gene locus involved in the cadherin superfamily, cGMP, and endothelial progenitor cell, and lipoprotein related protein, etc. CONCLUSIONS: These genetic variations may be associated with the regular exercise-induced improvement of arterial stiffness. Supported by grant in KAKENHI 22650166