F2 Plants Research Articles

Fine Mapping of Stripe-Rust-Resistance Gene YrJ22 in Common Wheat by BSR-Seq and MutMap-Based Sequencing

Identification and accurate mapping of new resistance genes are essential for gene pyramiding in wheat breeding. The YrJ22 gene is a dominant stripe-rust-resistance gene located at the distal end of chromosome 2AL, which was identified in a leading Chinese-wheat variety, Jimai 22, showing high resistance to CYR32, a prevalent race of Puccinia striiformis tritici (Pst) in China. In the current study, 15 F1 and 2273 F2 plants derived from the cross of Jimai 22/Avocet S were used for the fine-mapping of YrJ22. The RNA-Seq of resistant and susceptible bulks of F2 plants (designated BSR-Seq) identified 10 single-nucleotide polymorphisms (SNP) in a 12.09 Mb physical interval on chromosome 2AL. A total of 1022 EMS-induced M3 lines of Jimai 22 were screened, to identify susceptible mutants for MutMap analysis. Four CAPS markers were developed from SNPs identified using BSR-Seq and MutMap. A linkage map for YrJ22 was constructed with 11 CAPS/STS and three SSR markers. YrJ22 was located at a 0.9 cM genetic interval flanked by markers H736 and H400, corresponding to a 340.46 kb physical region (768.7-769.0 Mb), including 13 high-confidence genes based on the Chinese Spring reference genome. TraesCS2A01G573200 is a potential candidate-gene, according to linkage and quantitative real-time PCR (qPCR) analyses. The CAPS marker H732 designed from an SNP in TraesCS2A01G573200 co-segregated with YrJ22. These results provide a useful stripe-rust-resistance gene and molecular markers for marker-assisted selection in wheat breeding and for further cloning of the gene.

Fitness and Rhizobacteria of F2, F3 Hybrids of Herbicide-Tolerant Transgenic Soybean and Wild Soybean.

The introduction of herbicide-tolerant (HT) transgenic soybeans (Glycine max (L.) Merr.) into farming systems raises great concern that transgenes may flow to endemic wild soybeans (Glycine soja Sieb. et Zucc.) via pollen, which may increase the ecological risks by increasing the fitness of hybrids under certain conditions and threaten the genetic diversity of wild soybean populations. In order to demonstrate the potential risk of gene flow from the HT soybean to the wild soybean, the fitness of F2 and F3 hybrids obtained from two wild soybean populations (HLJHRB-1, JSCZ) collected from China and the HT soybean was measured under farmland and wasteland soil conditions, as well as with or without weed competition. Compared with their wild progenitors, the F2 and F3 hybrids of HLJHRB-1 displayed a higher emergence rate, higher aboveground dry biomass, more pods and filled-seed plants, as well as better composite fitness under four planting conditions. The F2 and F3 hybrids of JSCZ also displayed a higher emergence rate, higher aboveground dry biomass, more pods, and more filled seeds per plant under mixed planting, whereas these characteristics were lower under pure planting conditions in wasteland and farmland soil. Therefore, the composite fitness of JSCZ hybrids was higher or lower depending on the planting conditions. Furthermore, the soil microbial communities of the F3 of HLJHRB-1, JSCZ, and the wild soybean were investigated with 16S rDNA sequencing, which showed that low alpha diversity of rhizobacteria was relative to high fitness, and Rhizobium played an important role in promoting F3 plant growth.

Frequent spontaneous structural rearrangements promote rapid genome diversification in a Brassica napus F1 generation.

In a cross between two homozygous Brassica napus plants of synthetic and natural origin, we demonstrate that novel structural genome variants from the synthetic parent cause immediate genome diversification among F1 offspring. Long read sequencing in twelve F1 sister plants revealed five large-scale structural rearrangements where both parents carried different homozygous alleles but the heterozygous F1 genomes were not identical heterozygotes as expected. Such spontaneous rearrangements were part of homoeologous exchanges or segmental deletions and were identified in different, individual F1 plants. The variants caused deletions, gene copy-number variations, diverging methylation patterns and other structural changes in large numbers of genes and may have been causal for unexpected phenotypic variation between individual F1 sister plants, for example strong divergence of plant height and leaf area. This example supports the hypothesis that spontaneous de novo structural rearrangements after de novo polyploidization can rapidly overcome intense allopolyploidization bottlenecks to re-expand crops genetic diversity for ecogeographical expansion and human selection. The findings imply that natural genome restructuring in allopolyploid plants from interspecific hybridization, a common approach in plant breeding, can have a considerably more drastic impact on genetic diversity in agricultural ecosystems than extremely precise, biotechnological genome modifications.

Genetic mapping of the Andean anthracnose resistance gene present in the common bean cultivar BRSMG Realce.

The rajado seeded Andean bean (Phaseolus vulgaris L.) cultivar BRSMG Realce (striped seed coat) developed by Embrapa expressed a high level of anthracnose resistance, caused by Colletotrichum lindemuthianum, in field and greenhouse screenings. The main goal of this study was to evaluate the inheritance of anthracnose resistance in BRSMG Realce, map the resistance locus or major gene cluster previously named as Co-Realce, identify resistance-related positional genes, and analyze potential markers linked to the resistance allele. F2 plants derived from the cross BRSMG Realce × BRS FC104 (Mesoamerican) and from the cross BRSMG Realce × BRS Notável (Mesoamerican) were inoculated with the C. lindemuthianum races 475 and 81, respectively. The BRSMG Realce × BRS FC104 F2 population was also genotyped using the DArTseq technology. Crosses between BRSMG Realce and BAT 93 (Mesoamerican) were also conducted and resulting F2 plants were inoculated with the C. lindemuthianum races 65 and 1609, individually. The results shown that anthracnose resistance in BRSMG Realce is controlled by a single locus with complete dominance. A genetic map including 1,118 SNP markers was built and shown 78% of the markers mapped at a distances less than 5.0 cM, with a total genetic length of 4,473.4 cM. A major locus (Co-Realce) explaining 54.6% of the phenotypic variation of symptoms caused by the race 475 was identified in Pv04, flanked by the markers snp1327 and snp12782 and 4.48 cM apart each other. These SNPs are useful for marker-assisted selection, due to an estimated selection efficiency of 99.2%. The identified resistance allele segregates independently of the resistance allele Co-33 (Pv04) present in BAT 93. The mapped genomic region with 704,867 bp comprising 63 putative genes, 44 of which were related to the pathogen-host interaction. Based on all these results and evidence, anthracnose resistance in BRSMG Realce should be considered as monogenic, useful for breeding purpose. It is proposed that locus Co-Realce is unique and be provisionally designated as CoPv04R until be officially nominated in accordance with the rules established by the Bean Improvement Cooperative Genetics Committee.

Features of growing red beet and carrot in the conditions of the south-western part of the Central region of the Russian Federation

Relevance and methodology. The article presents the results of the study of economically valuable signs of red beet and carrot when grown in the conditions of the south-western part of the Central region of the Russian Federation. The aim of scientific researches was to conduct phytosanitary monitoring of crops, study the species composition of harmful organisms and the relative resistance of varieties and hybrids of vegetable root crops to harmful organisms in the Bryansk region. The estimation on level of ecotoxicant accumulation during cultivation was carried out. The researches were carried out in 2018–2020 in the stationary field of the Bryansk State Agrarian University.Results. As a result of the researches, the species composition of harmful organisms on the variety samples of red beet and garden carrot was established. In the conditions of the Bryansk region, according to the signs of "root crop mass" and "commercial yield" on average over the years of research varieties and hybrids of garden carrots Mars F1, Kupar F1, Nadezhda F1, Shantene korolevskaya, Nante, Minor were identified. Insignificant population of willow-carrot aphid — Cavariella aegopodii (Skop.) —was established on plants of varieties Nante, Nantskaya 4, Marlinka, Minor and hybrid Nadezhda F1. The Nante variety with a high content of carotene (185.1 mg/kg), dry matter (13.3%), low accumulation of nitrates (11.0 mg/kg) and relative resistance to pests was selected according to the results of biochemical analysis. The development of red beet cercosporosis (R) was found to be at a level of 1.6 to 11.3%, while the prevalence of the disease ranged from 22.7 to 76.9%. The variety samples Mulatka, Lyubava and Nezhnost(R 2–2.4%) were slightly affected. A high degree of the disease prevalence was noted in the varieties Nesravnennaya, Gospadynya, Bordo 237. The samples Mulatka, Kreolka, Gospadynya, Lyubava, Nesravnennaya were selected according to the mass of the root crop and resistance to harmful organisms.

Influence of Cultivation Technology on the Growth and Development of Sweet Corn Plants of Hybrid Moreland F1

Influence of Cultivation Technology on the Growth and Development of Sweet Corn Plants of Hybrid Moreland F1

Hybridization rate and fitness of hybrids produced between the tetraploid Camelina rumelica and hexaploid Camelina sativa

Pre-release risk assessment of genetically modified (GM) Camelina sativa (L.) Crantz requires a careful evaluation of the reproductive compatibility with its closely-related Camelina species. Camelina rumelica Velen. is a naturalized weed occurring in C. sativa production region in the northwestern China. In this study, a large number of reciprocal crosses was conducted between the tetraploid C. rumelica and hexaploid C. sativa. The F1 hybrids were produced by the tetraploid C. rumelica (♀) × hexaploid C. sativa (♂) at the rate of one hybrid for 217 ovules pollinated, and one hybrid for 220 ovules pollinated in the reciprocal direction. All F1 hybrids required vernalization treatment to induce timely flowering and showed the significant lower pollen viability (< 2%) compared to the parental lines. Despite that the F1 failed to backcross with the parental lines, selfed seeds (F2) were obtained from F1 hybrids plants. The F2 hybrids showed some degree of restored pollen viability (about 20%) and successfully produced seeds by both backcrossing and self-pollination. A similar pattern was observed in the field, with F1 hybrids showing self-compatibility and reduced seed production potential. It is worthwhile to mention that all F1 and F2 plants grew well both in the greenhouse and field conditions, but with the significant lower seed production ability. A portion of selfed F2 seeds from naturally shattering persisted in the soil seedbank during summer period and subsequently germinated in late fall. By contrast, other F2 seeds may have been dormant in the soil seedbank and germinated the following spring. These altered life-cycle related traits in hybrids generates the novel ecological concerns on the persistence and population dynamics of transient hybrids in the seedbank. In summary, this study provided the evidence that the tetraploid C. rumelica and hexaploid C. sativa, which have the sympatric distributions and overlapped flowering periods, gene flow between them probably could occur. Although the rate was relatively low (about 0.5%), the introgression of life-cycle related traits into C. sativa population could alter its key life-cycle traits and raise the concerns on the soil seedbank persistence and invasiveness of transient hybrid in C. sativa production region in the northwestern China.

A Major Recessive Gene Associated with Anthracnose (Colletotrichum capsici) Resistance in Chilli Pepper

Chilli anthracnose caused by Colletotrichum sp., is an important disease in Bangladesh and many other Asian countries. Recently the local Bangladeshi genotype ‘Comilla-2’ was found resistant to C. capsici. Inheritance of resistant to C. capsici was analyzed in segregating populations derived from a cross of ‘BARI chilli-1’ x ‘Comilla-2’. BARI chilli-1 as susceptible and Comilla-2 as resistant parent was used in the study. Detached matured green fruits were inoculated using the microinjection method. Disease response was evaluated using disease incidence and over all lesion diameter at 8 days after inoculation. The disease reaction of F1 plants in case of disease incidence and overall lesion diameter were clearly skewed to the susceptible parent, with average values of 46.70% and 13.2 mm, respectively. The distribution of disease incidence in the F2 population was skewed toward the susceptible parent and the distribution of overall lesion diameter in the F2 population showed a similar trend. Based on the scale of resistance and susceptibility, less than 25.0% disease incidence or less than 9.0 mm overall lesion diameter were evaluated as resistance. In the cross ‘BARI chilli-1’ x ‘Comilla-2’, the segregation ratios of resistance and susceptibility scored by disease incidence and overall lesion diameter in the F2 , BCr and BCs populations and chi-squared test significantly fitted one recessive gene model i.e. 1:3 Mendelian model. The result indicates that the resistance of ‘Comilla-2’ to C. capsici is controlled by a single recessive gene.

Introgression of a Complex Genomic Structural Variation Causes Hybrid Male Sterility in GJ Rice (Oryza sativa L.) Subspecies.

Hybrids between different subspecies of rice Oryza&amp;nbsp;sativa L. commonly show hybrid sterility. Here we show that a widely planted commercial japonica/GJ variety, DHX2, exhibited hybrid sterility when crossing with other GJ varieties. Using the high-quality genome assembly, we identified three copies of the Sc gene in DHX2, whereas Nipponbare (Nip) had only one copy of Sc. Knocking out the extra copies of Sc in DHX2 significantly improved the pollen fertility of the F1 plant of DHX2/Nip cross. The population structure analysis revealed that a slight introgression from Basmati1 might occur in the genome of DHX2. We demonstrated that both DHX2 and Basmati1 harbored three copies of Sc. Moreover, the introgression of GS3 and BADH2/fgr from Basmati1 confers the slender and fragrance grain of DHX2. These results add to our understanding of the hybrid sterility of inter-subspecies and intra-subspecies and may provide a novel strategy for hybrid breeding.

Specialized metabolism by trichome-enriched Rubisco and fatty acid synthase components.

Acylsugars, specialized metabolites with defense activities, are secreted by trichomes of many solanaceous plants. Several acylsugar metabolic genes (AMGs) remain unknown. We previously reported multiple candidate AMGs. Here, using multiple approaches, we characterized additional AMGs. First, we identified differentially expressed genes between high- and low-acylsugar-producing F2 plants derived from a cross between cultivated tomato (Solanum lycopersicum) and a wild relative (Solanum pennellii), which produce acylsugars that are ∼1% and ∼20% of leaf dry weight, respectively. Expression levels of many known and candidate AMGs positively correlated with acylsugar amounts in F2 individuals. Next, we identified lycopersicum-pennellii putative orthologs with higher nonsynonymous to synonymous substitutions. These analyses identified four candidate genes, three of which showed enriched expression in stem trichomes compared to underlying tissues (shaved stems). Virus-induced gene silencing confirmed two candidates, Sopen05g009610 [beta-ketoacyl-(acyl-carrier-protein) reductase; fatty acid synthase component] and Sopen07g006810 (Rubisco small subunit), as AMGs. Phylogenetic analysis indicated that Sopen05g009610 is distinct from specialized metabolic cytosolic reductases but closely related to two capsaicinoid biosynthetic reductases, suggesting evolutionary relationship between acylsugar and capsaicinoid biosynthesis. Analysis of publicly available datasets revealed enriched expression of Sopen05g009610 orthologs in trichomes of several acylsugar-producing species. Similarly, orthologs of Sopen07g006810 were identified as solanaceous trichome-enriched members, which form a phylogenetic clade distinct from those of mesophyll-expressed "regular" Rubisco small subunits. Furthermore, δ13C analyses indicated recycling of metabolic CO2 into acylsugars by Sopen07g006810 and showed how trichomes support high levels of specialized metabolite production. These findings have implications for genetic manipulation of trichome-specialized metabolism in solanaceous crops.

Genetic Variability, Heritability and Genetic Advance Studies on Yield, Its Components, Quality Traits and Gall Midge Incidence in Rice (Oryza sativa L.)

Twenty-eight lines including 18 F1 plants, 9 parents, and one commercial were studied for estimation of genetic variability, heritability, and genetic advance at Agricultural Research Station, Kunaram. Analysis of variance revealed highly significant differences among the genotypes for all the traits studied indicating the presence of a considerable amount of variability among the genotypes for yield and its components, quality traits and gall midge incidence. PCV values for the number of productive tillers per plant were significantly greater than GCV indicating highly sensitive to environmental changes. The GCV and PCV were high for the percentage of gall midge incidence, the number of productive tillers per plant, the number of filled grains per panicle, and grain yield per plant, whereas, low for hulling percentage, head rice recovery, milling percentage, and kernel length. Additive gene action was predominant for Gall midge incidence, number of productive tillers per plant, number of filled grains per panicle, grain yield per plant and grain weight per 1000 grains as they registered high heritability coupled with high genetic advance values.

Identification of Candidate Genes for Rind Color and Bloom Formation in Watermelon Fruits Based on a Quantitative Trait Locus-Seq.

Watermelon fruit rind color (RC) and bloom formation (BF) affect product value and consumer preference. However, information on the candidate gene(s) for additional loci involved in dark green (DG) RC and the genetic control of BF and its major chemical components is lacking. Therefore, this study aimed to identify loci controlling RC and BF using QTL-seq of the F2 population derived by crossing ‘FD061129’ with light-green rind and bloom and ‘SIT55616RN’ with DG rind and bloomless. Phenotypic evaluation of the F1 and 219 F2 plants indicated the genetic control of two complementary dominant loci, G1 and G2, for DG and a dominant locus, Bf, for BF. QTL-seq identified a genomic region on Chr.6 for G1, Chr.8 for G2, and Chr.1 for Bf. G1 and G2 helped determine RC with possible environmental effects. Chlorophyll a-b binding protein gene-based CAPS (RC-m5) at G1 matched the highest with the RC phenotype. In the 1.4 cM Bf map interval, two additional gene-based CAPS markers were designed, and the CAPS for a nonsynonymous SNP in Cla97C01G020050, encoding a CSC1-like protein, cosegregated with the BF trait in 219 F2 plants. Bloom powder showed a high Ca2+ concentration (16,358 mg·kg−1), indicating that the CSC1-like protein gene is possibly responsible for BF. Our findings provide valuable information for marker-assisted selection for RC and BF and insights into the functional characterization of genes governing these watermelon-fruit-related traits.

Molecular Characterizations of the er1 Alleles Conferring Resistance to Erysiphe pisi in Three Chinese Pea (Pisum sativum L.) Landraces.

Powdery mildew caused by Erysiphe pisi DC. is a major disease affecting pea worldwide. This study aimed to confirm the resistance genes contained in three powdery mildew-resistant Chinese pea landraces (Suoshadabaiwan, Dabaiwandou, and Guiwan 1) and to develop the functional markers of the novel resistance genes. The resistance genes were identified by genetic mapping and PsMLO1 gene sequence identification. To confirm the inheritance of powdery mildew resistance in the three Landraces, the susceptible cultivars Bawan 6, Longwan 1, and Chengwan 8 were crossed with Suoshadabaiwan, Dabaiwandou, and Guiwan 1 to produce F1, F2, and F2:3 populations, respectively. All F1 plants were susceptible to E. pisi, and phenotypic segregation patterns in all the F2 and F2:3 populations fit the 3:1 (susceptible: resistant) and 1:2:1 (susceptible homozygotes: heterozygotes: resistant homozygotes) ratios, respectively, indicating powdery mildew resistance in the three Landraces were controlled by a single recessive gene, respectively. The analysis of er1-linked markers and genetic mapping in the F2 populations suggested that the recessive resistance genes in three landraces could be er1 alleles. The cDNA sequences of 10 homologous PsMLO1 cDNA clones from the contrasting parents were obtained. A known er1 allele, er1-4, was identified in Suoshadabaiwan. Two novel er1 alleles were identified in Dabaiwandou and Guiwan 1, which were designated as er1-13 and er1-14, respectively. Both novel alleles were characterized with a 1-bp deletion (T) in positions 32 (exon 1) and 277 (exon 3), respectively, which caused a frame-shift mutation to result in premature termination of translation of PsMLO1 protein. The co-dominant functional markers specific for er1-13 and er1-14, KASPar-er1-13, and KASPar-er1-14 were developed and effectively validated in populations and pea germplasms. Here, two novel er1 alleles were characterized and their functional markers were validated. These results provide powerful tools for marker-assisted selection in pea breeding.

Construction of a high-density genetic map and localization of grazing-tolerant QTLs in Medicago falcata L.

BackgroundUsing genomic DNA from 79 F1 plants resulted from a crossing between parents with strong and weak grazing tolerance in Medicago falcata L., we generated an EcoRI restriction site-associated DNA (RAD) sequencing library. After sequencing and assembly, a high-density genetic map with high-quality SNP markers was constructed, with a total length of 1312.238 cM and an average density of 0.844 SNP/cM.MethodsThe phenotypic traits of 79 F1 families were observed and the QTLS of 6 traits were analyzed by interval mapping.ResultsSixty three QTLs were identified for seven traits with LOD values from 3 to 6 and the contribution rates from 15% to 30%. Among the 63 QTLs, 17 were for natural shoot height, 12 for rhizome Length, 10 for Shoot canopy diameter, 9 for Basal plant diameter, 6 for stem number, 5 for absolute shoot height, and 4 for rhizome width. These QTLs were concentrated on LG2, LG4, LG5, LG7, and LG8. LG6 had only 6 QTLs. According to the results of QTL mapping, comparison of reference genomes, and functional annotation, 10 candidate genes that may be related to grazing tolerance were screened. qRT-PCR analysis showed that two candidate genes (LOC11412291 and LOC11440209) may be the key genes related to grazing tolerance of M. falcata.ConclusionThe identified trait-associated QTLs and candidate genes in this study will provide a solid foundation for future molecular breeding for enhanced grazing-tolerance in M. falcata.

Influence of differential root and shoot growth rate on seedling vigour index in rice

Early seedling vigour is an important trait in direct seeded rice which determines the growth and yield. It is a complex trait and is found to be associated with germination and seedling growth. The rice genotypes, BPT 5204 and PB 1850-27 were screened for early seedling vigour traits and the data was recorded on germination percentage, root length, shoot length, seedling length, seedling fresh weight and seedling dry weight. The seedling vigour index I and seedling vigour index II were calculated for both the genotypes. It was observed that seedling vigour index I and II was found higher in PB 1850-27 as compared to BPT 5204. The principal component analysis was done to study differential root and shoot growth rate in F1 plants with parents. It was observed that growth rate in F1 seedlings was found higher than both the parents. The root growth in F1 plants resemble BPT 5204 during initial days of germination, while shoot growth pattern exhibited similarity only with PB 1850-27. The F2 population exhibited segregation for mean root and shoot length.

Genetic Analysis and Fine Mapping of ZmGHT1 Conferring Glufosinate Herbicide Tolerance in Maize (Zea mays L.).

Weed interference in the crop field is one of the major biotic stresses causing dramatic crop yield losses, and the development of herbicide-resistant crops is critical for weed control in the application of herbicide technologies. To identify herbicide-resistant germplasms, we screened 854 maize inbreed lines and 25,620 seedlings by spraying them with 1 g/L glufosinate. One plant (L336R), possibly derived from a natural variation of line L336, was identified to have the potential for glufosinate tolerance. Genetic analysis validated that the glufosinate tolerance of L336R is conferred by a single locus, which was tentatively designated as ZmGHT1. By constructing a bi-parental population derived from L336R, and a glufosinate sensitive line L312, ZmGHT1 was mapped between molecular markers M9 and M10. Interestingly, genomic comparation between the two sequenced reference genomes showed that large scale structural variations (SVs) occurred within the mapped region, resulting in 2.16 Mb in the inbreed line B73, and 11.5 kb in CML277, respectively. During the fine mapping process, we did not detect any additional recombinant, even by using more than 9500 F2 and F3 plants, suspecting that SVs should also have occurred between L336R and L312 in this region, which inhibited recombination. By evaluating the expression of the genes within the mapped interval and using functional annotation, we predict that the gene Zm00001eb361930, encoding an aminotransferase, is the most likely causative gene. After glufosinate treatment, lower levels of ammonia content and a higher activity of glutamine synthetase (GS) in L336R were detected compared with those of L336 and L312, suggesting that the target gene may participate in ammonia elimination involving GS activity. Collectively, our study can provide a material resource for maize herbicide resistant breeding, with the potential to reveal a new mechanism for herbicide resistance.

Estimates of genotypic and phenotypic variance, heritability, and genetic advance of horticultural traits in developed crosses of cowpea (Vigna unguiculata [L.] Walp).

Cowpea, in addition to being a food and feed crop, plays a key role in sustainable farming. The present study’s goal is to develop new high-yielding cowpea varieties. A Field experiment was carried out across 3 summer seasons and the breeding program included 28 distinct cowpea varieties, out of which five potential parents were selected for this investigation. Local cultivars, i.e., Cream 7 ‘Cr7’, Dokki 331 ‘D331’, Commercial 1 ‘Com1’, and introduced cultivars, i.e., Colossus ‘Col’ and Asian Introduction ‘AI’ were utilized to produce six crosses in two generations apart; F1 and F2: Col x AI, Col x Com1, Cr7 x AI, Cr7 x Com1, D331 x AI, and D331 x Com1. ‘AI’ and ‘Com1’ were superior in pod length, pod diameter, number of seeds/pod and seeds weight/pod, whereas ‘Col’, ‘Cr7’ and ‘D331’ were superior in seeds yield/plant, number of pods/plant and the least number of aborted ovules/pod. The genotypes/crosses showed greater genotypic variance (GV) than phenotypic variance (PV) for number of pods/plant, pod length, number of seeds/pod, number of aborted ovules/pod, fresh pod weight, seeds weight/pod, and seeds yield/plant. All studied variables showed high heritability (H%) in genotypes/crosses, despite the exception of seeds weight/pod, which ranged from 29.14 in ‘D331’ to 83.7 in F2 of Col x Com1. F2 plants and their parents’ genotypes showed greater H%. Cr7 x AI developed the most H%, 99.04% for number of pods/plant. D331 x Com1 and Cr7 x AI exhibited moderate H% for fresh pod weight in F1, but all other crosses had high H%. F1 and F2 crosses yielded moderate to high GCV and PCV for number of seeds/pod. Variations in parental genotypes and crossings reflect genetic diversity and the possibility of selection. Crossing with ‘AI,’ and ‘Com1’ genotypes enhanced the performance of the other varieties, ‘Col’, ‘D331’ and ‘Cr7’. Cr7 x Com1 and D331 x AI were selected as the most promising crosses for cowpea breeding programs.

Evaluation of Septoria leaf spot (Septoria helianthi) alone and in combination with other foliar fungal spots on sunflower

Abstract In recent years, Septoria leaf spot has taken a strong place in the list of economically important diseases of sunflower. It may be a favorable factor for the development of other diseases on sunflower plants too. The aim of the research was to evaluate the frequency and degree of infection of sunflower plants with Septoria helianthi as well as possibility of simultaneous infection with this pathogen and other fungi which cause foliar spots, such as downy mildew, Alternaria leaf spot and Phoma black stem under conditions of stationary infectious nursery. The year 2021 turned out to be extremely favorable for the development of fungal leaf spots on sunflower. Assessment of fungal diseases of sunflower plants was performed in F2 families obtained after crossing ZL22A, ZL58A, ZL70A, ZL78A, and ZL169A lines of Zaporozhye breeding (Ukraine) with HAR7 line (originating from the USA). Each F2 family (sample) was obtained from self-pollination of one F1 plant with varying severity of Septoria disease. It was found that in the conditions of 2021, sunflower was quite affected by Septoria disease. The percentage of injured plants in F2 samples ranged from 41.0 to 100.0%. The severity of disease was different. Less resistant genotypes included plants with lesions on sunflower leaves of lower, middle, and upper tiers in approximately equal numbers, while more resistant genotypes had almost no plants with injured leaves of upper tiers. It was established that the development of Phoma disease occurred both on plants with Septoria leaf spot and on healthy plants. On average, among the plants infected with Phoma macdonaldii, the proportion of plants jointly affected by Phoma and Septoria diseases was 2/3. However, the frequency of simultaneous infection of plants with S. helianthi and P. macdonaldii in genotypes with different resistance to Septoria leaf spot differed significantly and ranged from 80% in less resistant to 40% in more resistant accessions. Most plants (about 90%) infected with Plasmopara halstedii were simultaneously infected with S. helianthi. That is, both of these pathogens can simultaneously develop on the same plant and lead to a decline in its basic physiological functions. The rate of simultaneous damage of sunflower by Alternaria and Septoria was quite low compared to plant damage by Alternaria alone and was less than 30%. This may mean that the pathogen of Alternaria leaf spot avoids plants with existing S. helianthi fungus.

Inheritance of traits related to yield and fatty acid profile of winter squash seed oil

The objective of this study was to determine the inheritance of traits related to seed oil yield and fatty acid profile components and to estimate the genetic relationships between these traits in Cucurbita moschata D. This study assessed six generations derived from crosses between parents with contrasting traits under study. F1 plants were obtained from the crossing between BGH 7319 (P1) and ‘Tronco Verde’ (P2), which were subsequently self-fertilized to obtain the F2 generation. F1 plants were also backcrossed with the P1 and P2 parents to obtain the BC1 and BC2 generations, respectively. In general, additive effects were predominant for most of the traits, and thus, the development of inbred lines is the recommended strategy for genetic improvement of these traits. Dominance effects were significant even under low expression. This demonstrates that the performance of progeny tests throughout the selfing generations will enable the distinction between genotypes, thus providing greater efficiency in selection and, consequently, greater genetic gains. In addition, overdominance was observed in oil content; therefore, the development of hybrids with genotypes causing high oil content is attainable. In general, the estimates of genetic correlations had a high magnitude and were favorable to the increase in functional oil productivity, associated with better quality of fatty acid profiles. Recurrent intrapopulation selection aimed at the development of open-pollinated varieties with high productivity, associated with greater stability of the functional oil in C. moschata, may be useful.

Metabolomic and transcriptomic analyses reveal a MYB gene, CsAN1, involved in anthocyanins accumulation separation in F1 between 'Zijuan' (Camellia sinensis var. assamica) and 'Fudingdabaicha' (C. sinensis var. sinensis) tea plants.

‘Zijuan’ (Camellia sinensis var. assamica), a somatic mutant with purple foliage and stem selected from the Yunnan Daye cultivar, has been well developed owing to abnormal pattern of anthocyanin accumulation. However, the genetic basis for the specific accumulation of phloem glycosides is not clear. Tea plants are self-incompatible, so parents with large differences in foliage color were used for crosses to investigate the genetic mechanism of anthocyanins. In this study, ‘Zijuan’ and green foliage cultivar ‘Fudingdabaicha’ (C. sinensis var. sinensis) were used as female and male parents, respectively, to generated F1 hybrid progenies with various anthocyanin contents. In order to decipher the genetic rules of anthocyanins accumulation, we performed widely targeted metabolic and transcriptomic profiling. The results showed that cyanidin-3-O-galactoside, delphinidin-3-O-galactoside and petunidin-3-O-galactoside were the major types of anthocyanins and factors directly led to the color variation between parents and F1 plants. Transcriptomic analyses suggested the significant up-regulation of anthocyanidin synthase gene (CsANS1) and CsAN1, a MYB family gene positively regulated the expression of CsANS1, in anthocyanin-rich tea plants. Furthermore, the deletion mutation of CsAN1 was found by cloning and alignment in anthocyanin-lacking cultivars. Taken together, the function deficiency of CsAN1 is predominantly responsible for the inability of anthocyanins accumulation, and this trait is heritable in progenies through hybridization. The present study elucidated the molecular basis of leaf purple trait formation in ‘zijuan’ and ‘Fudingdabaicha’ and their F1 plants, which helps to elucidate the genetic mechanism of leaf anthocyanin accumulation regulation in tea plants, and the results provide a research reference for the selection and breeding of high anthocyanin type tea varieties.