Extracellular Poly Research Articles

Attachment of Con A or extracellular matrix initiates rapid sprouting by cultured leech neurons.

The outgrowth of neurites by single identified leech neurons in culture is markedly influenced by the substrate. Extensive sprouting occurs within a few hours on the plant lectin Con A. In contrast, the same neurons grow far more slowly or not at all when plated on vertebrate extracellular matrix proteins, other lectins, or poly(L-lysine). Sprouting on Con A, unlike that on poly(L-lysine), is inhibited by the Con A-specific hapten sugar methyl alpha-D-mannoside. Another substrate, promoting even more extensive sprouting of leech neurons, is cell-free extracellular matrix obtained from leech ganglion capsules. Urea extracts of extracellular matrix retain full neurite-promoting activity when dialyzed and used to coat culture dishes. Soluble growth factors are not required, since sprouting occurs in medium without macromolecules. These results show that sprouting depends not simply on attachment to the substrate but, critically, on its molecular composition; moreover, the pattern of outgrowth is characteristic and distinguishable for each type of neuron.

Degradation of poly(3-hydroxybutyrate) by poly(3-hydroxybutyrate) depolymerase from Alcaligenes faecalis T 1

The extracellular poly(3-hydroxybutyrate) depolymerase purified from Alcaligenes faecalis T 1 has two disulfide bonds, one of which appears to be necessary for the full enzyme activity. This depolymerase hydrolyzed not only hydrophobic poly(3-hydroxybutyrate) but also water-soluble trimer and larger oligomers of D-(−)-3-hydroxybutyrate, regardless of their solubilities in water. Kinetic analyses with oligomers of various sizes indicated that the substrate cleaving site of the enzyme consisted of four subsites with individual affinities for monomer units of the substrate. Analyses of the hydrolytic products of oligomers, which had labeled D-(−)-3-hydroxybutyrate at the hydroxy terminus, showed that the enzyme cleaved only the second ester linkage from the hydroxy terminus of the trimer and tetramer, and acted as an endo-type hydrolase toward the pentamer and higher oligomers. The enzyme appeared to have a hydrophobic site which interacted with poly(3-hydroxybutyrate) and determined the affinity of the enzyme toward the hydrophobic substrate.

Purification and properties of extracellular poly(3-hydroxybutyrate) depolymerases from Pseudomonas lemoignei

Extracellular poly(3-hydroxybutyrate) depolymerase was purified from the culture medium of Peudomonas lemoignei and separated into four isozymes (A 1, A 2, B 1 and B 2) by CM-Sepharose CL-6B chromatography. The molecular weights of A 1 and A 2 and those of B 1 and B 2 were estimated to be 54000 and 58000, respectively, by polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate. The isoelectric points of A 1, A 2, B 1 and B 2 were found to be approximately pH 9.7 10.0, 10.0 and 10.6, respectively, by isoelectric focusing. All four enzymes hydrolyzed poly(3-hydroxybutyrate) and oligomeric esters of d-(−)-3-hydroxybutyrate, but showed no activity toward the dimeric ester. Analysis of hydrolytic products of the oligomeric esters with A 1 and B 2 suggested that the enzymes hydrolyzed mainly the second and third ester bonds from the free hydroxy terminus at different frequencies, depending upon the chain length of the substrates.

An extracellular poly(3-hydroxybutyrate) depolymerase from Alcaligenes faecalis.

A strain of Alcaligenes faecalis T1, which was isolated from activated sludge, excreted an extracellular poly(3-hydroxybutyrate) depolymerase as it grew in a medium containing poly(3-hydroxybutyrate) as the sole carbon source. The molecular weight of the enzyme, purified from the culture medium to electrophoretic homogeneity, was 48 000 as determined by Sephadex G-100 filtration, and 50 000 by polyacrylamide gel electrophoresis in the presence of sodium dodecylsulfate. The pH optimum for the enzyme reaction was 7.5. The purified enzyme depolymerized poly(3-hydroxybutyrate) purified from Zoogloea ramigera 1-16-M, but did not attack the bacterial native poly(3-hydroxybutyrate)-containing granules. Km values were 13.3 micrograms/ml (= 0.78 microM, based on an estimated average molecular weight of 17 000) for poly(3-hydroxybutyrate) and 5.4 mM for the trimeric ester of D(--)-3-hydroxybutyric acid. Analysis of hydrolytic products of poly(3-hydroxybutyrate), several oligomeric esters of D(--)-3-hydroxybutyric acid, and the methyl ester of the trimeric ester indicated that the enzyme hydrolyzed these substrates from the free hydroxyl terminus, releasing D(--)-3-hydroxybutyrate dimer units one at a time.