This paper proposes a deformation evolution and perceptual prediction methodology for additive manufacturing of lightweight composite driven by hybrid digital twins (HDT). In order to improve manufacturing quality of irregular lightweight composite through boosting conceptual design in aeronautic and aerospace engineering, the HDT meaning hybridization of physical and digital domains, including deformation and energy efficiency can be built, where the essential parameters can be perceptually predicted in advance, by virtue of the fusion of physical sensors and digital information. The long short term memory (LSTM) can be employed to void vanishing gradient problem and improve predicting precision via Recurrent Neural Networks, thereby laying a foundation for the HDT. The diverse manufacturing requirements of different regions are integrated into the parameters designing phase by attaching region weights confirmed via empiricism and in-service simulation. The effects of slicing strategy and external support structures on manufacturing quality are considered from the perspective of improving dimensional accuracy. The manufacturing efficiency and comprehensive costs are accounted as consideration factors, which are perceptually predicted via LSTM. The designed manufacturing parameters through HDT were virtually examined by evaluating the deformation and equivalent stress distributions of fabricated lightweight component with composite material through AM process simulation. The physical experiments were conducted to verify the HDT-based pre-designing and optimization method of manufacturing parameters via fused deposition modeling (FDM). The energy consumption of actual manufacturing process was measured via digital power meter and applied to evaluate accuracy of perceptual prediction outcomes. The dimensional accuracy and distortion distribution of the manufactured lightweight prototype made with composite material were measured through the coordinate measuring machine (CMM) and 3D optical scanner. The proposed method demonstrates effectiveness in improving manufacturing quality and accurately predicting energy consumption, which have been verified with a three-way solenoid valve element, in which the maximum deformation was reduced by 39.78% and the mean absolute percentage error for perceptual prediction was 3.76%.