Experimental Buildup Curves Research Articles

17O MAS NMR Correlation Spectroscopy at High Magnetic Fields.

The structure of two protected amino acids, FMOC-l-leucine and FMOC-l-valine, and a dipeptide, N-acetyl-l-valyl-l-leucine (N-Ac-VL), were studied via one- and two-dimensional solid-state nuclear magnetic resonance (NMR) spectroscopy. Utilizing 17O magic-angle spinning (MAS) NMR at multiple magnetic fields (17.6-35.2 T/750-1500 MHz for 1H) the 17O quadrupolar and chemical shift parameters were determined for the two oxygen sites of each FMOC-protected amino acids and the three distinct oxygen environments of the dipeptide. The one- and two-dimensional, 17O, 15N-17O, 13C-17O, and 1H-17O double-resonance correlation experiments performed on the uniformly 13C,15N and 70% 17O-labeled dipeptide prove the attainability of 17O as a probe for structure studies of biological systems. 15N-17O and 13C-17O distances were measured via one-dimensional REAPDOR and ZF-TEDOR experimental buildup curves and determined to be within 15% of previously reported distances, thus demonstrating the use of 17O NMR to quantitate interatomic distances in a fully labeled dipeptide. Through-space hydrogen bonding of N-Ac-VL was investigated by a two-dimensional 1H-detected 17O R3-R-INEPT experiment, furthering the importance of 17O for studies of structure in biomolecular solids.

1H–1H Double Quantum NMR Investigation of Proton Dynamics in Solid Acids

Currently, the most popular proton exchange membrane (PEM) for fuel cell applications is Nafion. However, Nafion does not retain its high conductivity at high temperatures due to its dependence on water for proton transport. Because operational temperatures higher than the evaporation point of water are desirable, a family of solid acids was investigated. Cations known to transport protons were paired with anions to make acidic salts. Solid acids discussed here include imidazole paired with trifluoromethanesulfuric acid as well as imidazole, benzimidazole and adenine paired with methanesulfonic acid. Solid-state NMR was utilized to show the relative mobility of protons through double-quantum filter (DQF) experiments. The POST-C7 homonuclear dipolar-recoupling scheme was paired with DUMBO homonuclear decoupling to produce 1H double-quantum coherence buildup curves for the hydrogen-bonded protons of interest. Experimental buildup curves, which reflect both local structure as well as dynamics, are compared to theoretical curves of the static system. The SPINEVOLUTION-simulated curves utilized up to eight pairs of homonuclear dipolar couplings within a sphere of 7 Å diameter centered on the proton of interest. Steep buildup of the DQ curve and maxima at short recoupling times in the buildup curves indicate strong dipole–dipole coupling and are interpreted to indicate limited dynamics of the H-bonded protons. In contrast, shallower buildup curves and maxima at longer recoupling times imply that H-bonded protons (in an otherwise similar structure) are associated with local mobility, which reduces their local dipolar coupling and may facilitate proton transport. Bulk proton conductivities measured via electrochemical impedance spectroscopy were compared to DQF measurements to understand proton conduction within these materials.

Solid-State NMR Characterization of Mixed Phosphonic Acid Ligand Binding and Organization on Silica Nanoparticles.

As ligand functionalization of nanomaterials becomes more complex, methods to characterize the organization of multiple ligands on surfaces is required. In an effort to further the understanding of ligand-surface interactions, a combination of multinuclear ((1)H, (29)Si, (31)P) and multidimensional solid-state nuclear magnetic resonance (NMR) techniques was utilized to characterize the phosphonic acid functionalization of fumed silica nanoparticles using methylphosphonic acid (MPA) and phenylphosphonic acid (PPA). (1)H → (29)Si cross-polarization (CP)-magic angle spinning (MAS) solid-state NMR was used to selectively detect silicon atoms near hydrogen atoms (primarily surface species); these results indicate that geminal silanols are preferentially depleted during the functionalization with phosphonic acids. (1)H → (31)P CP-MAS solid-state NMR measurements on the functionalized silica nanoparticles show three distinct resonances shifted upfield (lower ppm) and broadened compared to the resonances of the crystalline ligands. Quantitative (31)P MAS solid-state NMR measurements indicate that ligands favor a monodentate binding mode. When fumed silica nanoparticles were functionalized with an equal molar ratio of MPA and PPA, the MPA bound the nanoparticle surface preferentially. Cross-peaks apparent in the 2D (1)H exchange spectroscopy (EXSY) NMR measurements of the multiligand sample at short mixing times indicate that the MPA and PPA are spatially close (≤5 Å) on the surface of the nanostructure. Furthermore, (1)H-(1)H double quantum-single quantum (DQ-SQ) back-to-back (BABA) 2D NMR spectra further confirmed that MPA and PPA are strongly dipolar coupled with observation of DQ intermolecular contacts between the ligands. DQ experimental buildup curves and simulations indicate that the average distance between MPA and PPA is no further than 4.2 ± 0.2 Å.

Influence of proton coupling on symmetry-based homonuclear 19F dipolar recoupling experiments

We study the efficiency of two symmetry based homonuclear 19F double-quantum recoupling sequences for moderate (R1426) and ultra-fast (R1445) MAS under the influence of strong 1H–1H and 1H–19F dipolar interactions and 1H continuous wave decoupling. Simulations based on various spin systems derived from the organic solid 1,3,5-tris(2-fluoro-2-methylpropionylamino)benzene (F-BTA), used as a model system, reveal that the strong-decoupling limit is not accessible even for moderate spinning speeds. Additionally, for the no-decoupling limit improved DQ efficiencies are predicted for both moderate and ultra-fast MAS. Strong perturbations of build-up curves can be avoided by additional stabilisation through supercycling. Additional 1H cw decoupling during 19F recoupling rapidly reduces the maximum DQ efficiency when deviating from the no-decoupling limit. These effects were confirmed by experimental data on F-BTA. For moderate spinning the influence of 1H–1H and 1H–19F couplings is markedly stronger compared to ultra-fast MAS. For the latter case those influences reduce to a constant scaling if only short excitation times up to the first minimum are taken into account. Based on this analysis the experimental build-up curves of 1,3,5-tris(2-fluoro-2-methylpropionylamino)benzene can be refined with homonuclear 19F spin systems which allow to probe even subtle structural differences for the fluorine atoms of F-BTA.

Proton-detected 2D radio frequency driven recoupling solid-state NMR studies on micelle-associated cytochrome-b5

Solid-state NMR spectroscopy is increasingly used in the high-resolution structural studies of membrane-associated proteins and peptides. Most such studies necessitate isotopically labeled (13C, 15N and 2H) proteins/peptides, which is a limiting factor for some of the exciting membrane-bound proteins and aggregating peptides. In this study, we report the use of a proton-based slow magic angle spinning (MAS) solid-state NMR experiment that exploits the unaveraged 1H–1H dipolar couplings from a membrane-bound protein. We have shown that the difference in the buildup rates of cross-peak intensities against the mixing time – obtained from 2D 1H–1H radio frequency-driven recoupling (RFDR) and nuclear Overhauser effect spectroscopy (NOESY) experiments on a 16.7-kDa micelle-associated full-length rabbit cytochrome-b5 (cytb5) – can provide insights into protein dynamics and could be useful to measure 1H–1H dipolar couplings. The experimental buildup curves compare well with theoretical simulations and are used to extract relaxation parameters. Our results show that due to fast exchange of amide protons with water in the soluble heme-containing domain of cyb5, coherent 1H–1H dipolar interactions are averaged out for these protons while alpha and side chain protons show residual dipolar couplings that can be obtained from 1H–1H RFDR experiments. The appearance of resonances with distinct chemical shift values in 1H–1H RFDR spectra enabled the identification of residues (mostly from the transmembrane region) of cytb5 that interact with micelles.

Conformation of beta-methylmelibiose bound to the ricin B-chain as determined from transferred nuclear Overhauser effects.

Transferred nuclear Overhauser effect (TRNOE) experiments have revealed a change in the torsion angles about the alpha-1-6 glycosidic bond of methyl beta-melibioside upon binding of the melibioside to the ricin B-chain (Rb). A full relaxation rate matrix simulation of experimental buildup curves aided in quantitative interpretation of 1D selective inversion recovery TRNOE experiments. The data are consistent with a model in which both major (omega approximately 170 degrees) and minor (omega approximately -60 degrees) conformers for methyl beta-melibioside are significantly populated in solution while the Rb/methyl beta-melibioside complex has little of the minor conformer populated. The results indicate that the ricin B-chain excludes binding of certain ligand conformations on the basis of unfavorable interactions between the protein surface and remote portions of the disaccharide system.