Analyzing the spatiotemporal evolution of urban land use and habitat quality can reveal the correlation between land use and habitat quality, aiding in rational urban land policies and high-quality ecological environment development. This study was based on land use transition matrices and an Intensity-Migration (IM) model to analyze the changes in land use in Harbin from 2000 to 2020. It combined the PLUS model to explore the driving factors of land use expansion for various land types and predicted land use scenarios for 2030 under natural development, ecological protection, farmland protection, and urban development scenarios. Finally, the InVEST model was used to complete the habitat quality analysis. The results indicated: ① The dominant land use types in Harbin were cropland, forest land, and grassland. From 2000 to 2020, there was a significant tendency of conversion into grassland, cropland, forest land, and artificial surfaces, with noticeable changes in land use intensity. Water bodies, bare land, and wetland types showed less conversion and tended to be restrictive. ② Elevation was the primary factor influencing the expansion of grassland, cropland, forest land, bare land, wetland, and water bodies. Socioeconomic factors were the main factor affecting the expansion of artificial surfaces. ③ Simulation of land use types in Harbin for 2030 under the four scenarios showed an increase in forest land area and a decrease in grassland area, with insignificant changes in wetland, water bodies, and bare land areas. Except for in the ecological protection scenario, the area of artificial surfaces increased, whereas cropland decreased. ④ Overall, habitat quality in Harbin improved from 2000 to 2020. ⑤ In 2030, the spatial pattern of habitat quality in Harbin remained consistent across all scenarios, showing an overall improvement in habitat quality. Under the ecological protection scenario, areas with low and medium habitat quality decreased, whereas areas with higher habitat quality increased, indicating a relatively significant improvement in habitat quality. The research results provide a scientific basis and insights for the development of ecological civilization and urban planning and construction in Harbin.