Exogenous Cues Research Articles

Attentional effect on contrast appearance: From enhancement to attenuation.

Does attention alter appearance? Recent studies have shown that an exogenous cue tends to increase the perceived contrast of a low-contrast stimulus. In the present study we systematically studied the attentional effect over a wide range of contrast levels (15% to 60%). Besides replicating the enhancement at lower contrast levels with higher comparative tasks (Experiment 1), the data revealed a cue-induced attenuation in apparent contrast at higher contrast levels with lower comparative tasks (Experiment 2) and same/different judgment task (Experiment 3). This attenuation effect was robust at the individual level, and it was not due to response bias or sensory interactions (Experiments 3 and 4). These results suggest that attention modulates contrast appearance and this effect depends on both the contrast level and the type of judgment task used. We propose that our findings can be understood through contrast gain mechanism on supersatuating neurons, whose response increases first as the stimulus intensity increases, but decrease the responses after the peak. This surprising phenomenon offers insights for the underlying neural mechanisms of visual processing. (PsycINFO Database Record

Hornwort stomata do not respond actively to exogenous and environmental cues.

Because stomata in bryophytes occur on sporangia, they are subject to different developmental and evolutionary constraints from those on leaves of tracheophytes. No conclusive experimental evidence exists on the responses of hornwort stomata to exogenous stimulation. Responses of hornwort stomata to abscisic acid (ABA), desiccation, darkness and plasmolysis were compared with those in tracheophyte leaves. Potassium ion concentrations in the guard cells and adjacent cells were analysed by X-ray microanalysis, and the ontogeny of the sporophytic intercellular spaces was compared with those of tracheophytes by cryo-scanning electron microscopy. The apertures in hornwort stomata open early in development and thereafter remain open. In hornworts, the experimental treatments, based on measurements of >9000 stomata, produced only a slight reduction in aperture dimensions after desiccation and plasmolysis, and no changes following ABA treatments and darkness. In tracheophytes, all these treatments resulted in complete stomatal closure. Potassium concentrations are similar in hornwort guard cells and epidermal cells under all treatments at all times. The small changes in hornwort stomatal dimensions in response to desiccation and plasmolysis are probably mechanical and/or stress responses of all the epidermal and spongy chlorophyllose cells, affecting the guard cells. In contrast to their nascent gas-filled counterparts across tracheophytes, sporophytic intercellular spaces in hornworts are initially liquid filled. Our experiments demonstrate a lack of physiological regulation of opening and closing of stomata in hornworts compared with tracheophytes, and support accumulating developmental and structural evidence that stomata in hornworts are primarily involved in sporophyte desiccation and spore discharge rather than the regulation of photosynthesis-related gaseous exchange. Our results run counter to the notion of the early acquisition of active control of stomatal movements in bryophytes as proposed from previous experiments on mosses.

NF-κB Activity Initiates Human ESC-Derived Neural Progenitor Cell Differentiation by Inducing a Metabolic Maturation Program.

SummaryHuman neural development begins at embryonic day 19 and marks the beginning of organogenesis. Neural stem cells in the neural tube undergo profound functional, morphological, and metabolic changes during neural specification, coordinated by a combination of exogenous and endogenous cues. The temporal cell signaling activities that mediate this process, during development and in the postnatal brain, are incompletely understood. We have applied gene expression studies and transcription factor-activated reporter lentiviruses during in vitro neural specification of human pluripotent stem cells. We show that nuclear factor κB orchestrates a multi-faceted metabolic program necessary for the maturation of neural progenitor cells during neurogenesis.

NCR+ ILC3 maintain larger STAT4 reservoir via T-BET to regulate type 1 features upon IL-23 stimulation in mice.

Innate lymphoid cells (ILCs) producing IL-22 and/or IL-17, designated as ILC3, comprise a heterogeneous subset of cells involved in regulation of gut barrier homeostasis and inflammation. Exogenous environmental cues in conjunction with regulated expression of endogenous factors are key determinants of plasticity of ILC3 toward the type 1 fate. Herein, by using mouse models and transcriptomic approaches, we defined at the molecular level, initial events driving ILC3 expressing natural cytotoxicity receptors (NCR+ ILC3) to acquire type 1 features. We observed that NCR+ ILC3 exhibited high basal expression of the signal-dependent transcription factor STAT4 due to T-BET, leading to predisposed potential for the type 1 response. We found that the prototypical inducer of type 3 response, IL-23, played a predominant role over IL-12 by accessing STAT4 and preferentially inducing its phosphorylation in ILC3 expressing T-BET. The early effector program driven by IL-23 was characterized by the expression of IL-22, followed by a production of IFN-γ, which relies on STAT4, T-BET and required chromatin remodeling of the Ifng locus. Altogether, our findings shed light on a feed-forward mechanism involving STAT4 and T-BET that modulates the outcome of IL-23 signaling in ILC3.

The relationship between flash based illusory line motion and exogenous visual attention.

If a bar suddenly appears between 2 squares after 1 of the squares flashes the bar appears to shoot away from the flashed square toward the other. This occurs despite the bar actually having been presented all at once. This illusory motion is sufficiently strong to cancel real motion drawn in the opposite direction. One explanation for the illusion in these displays is based upon the prior entry benefits generated by exogenous attention at the flashed location. These prior entry benefits can be offset by real motion in the opposite direction, which enables 1 to quantify the illusion based upon the area between the response curves following left and right flashes. The influence of attention can be quantified as the costs plus benefits during an exogenous cuing study involving target discrimination. The current study required participants to complete motion direction discrimination trials and a set of target discrimination trials following noninformative peripheral cues. If attention is involved in the motion illusion during these displays then those who show large effects of attention during cuing should also show large illusions. Correlation analyses confirmed a positive relationship existed between the costs plus benefits of exogenous attention and the illusory motion. (PsycINFO Database Record

The Joint Effects of Spatial Cueing and Transcranial Direct Current Stimulation on Visual Acuity.

The present study examined the mutual influence of cortical neuroenhancement and allocation of spatial attention on perception. Specifically, it explored the effects of transcranial Direct Current Stimulation (tDCS) on visual acuity measured with a Landolt gap task and attentional precues. The exogenous cues were used to draw attention either to the location of the target or away from it, generating significant performance benefits and costs. Anodal tDCS applied to posterior occipital area for 15 min improved performance during stimulation, reflecting heightened visual acuity. Reaction times were lower, and accuracy was higher in the tDCS group, compared to a sham control group. Additionally, in post-stimulation trials tDCS significantly interacted with the effect of precuing. Reaction times were lower in valid cued trials (benefit) and higher in invalid trials (cost) compared to neutrally cued trials, the effect which was pronounced stronger in tDCS group than in sham control group. The increase of cost and benefit effects in the tDCS group was of a similar magnitude, suggesting that anodal tDCS influenced the overall process of attention orienting. The observed interaction between the stimulation of the visual cortex and precueing indicates a magnification of attention modulation.

Dimensionally Specific Capture of Attention: Implications for Saliency Computation.

Observers automatically orient to a sudden change in the environment. This is demonstrated experimentally using exogenous cues, which prioritize the analysis of subsequent targets appearing nearby. This effect has been attributed to the computation of saliency, obtained by combining features specific signals, which then feed back to drive attention to the salient location. An alternative possibility is that cueing directly effects target-evoked sensory responses in a feed-forward manner. We examined the effects of luminance and equiluminant color cues in a dual task paradigm, which required both a motion and a color discrimination. Equiluminant color cues improved color discrimination more than luminance cues, but luminance cues improved motion discrimination more than equiluminant color cues. This suggests that the effects of exogenous cues are dimensionally specific and may not depend entirely on the computation of a dimension general saliency signal.

The Effects of Martial Arts Training on Attentional Networks in Typical Adults.

There is substantial evidence that training in Martial Arts is associated with improvements in cognitive function in children; but little has been studied in healthy adults. Here, we studied the impact of extensive training in Martial Arts on cognitive control in adults. To do so, we used the Attention Network Test (ANT) to test two different groups of participants: with at least 2 years of Martial Arts experience, and with no experience with the sport. Participants were screened from a wider sample of over 500 participants who volunteered to participate. 48 participants were selected: 21 in the Martial Arts group (mean age = 19.68) and 27 in the Non-Martial Arts group (mean age = 19.63). The two groups were matched on a number of demographic variables that included Age and BMI, following the results of a previous pilot study where these factors were found to significantly impact the ANT measures. An effect of Martial Arts experience was found on the Alert network, but not the Orienting or Executive ones. More specifically, Martial Artists showed improved performance when alert had to be sustained endogenously, performing more like the control group when an exogenous cue was provided. This result was further confirmed by a negative correlation between number of years of Martial Arts experience and the costs due to the lack of an exogenous cue suggesting that the longer a person takes part in the sport, the better their endogenous alert is. Results are interpreted in the context of the impact of training a particular attentional state in specific neurocognitive pathways.

A dinâmica temporal da atenção na memória de trabalho visual

A orientação da atenção, por meio de uma dica retroativa endógena, para locais de uma cena memorizada, favorece positivamente o processamento de forma equivalente ao favorecimento associado à dica endógena nas tarefas perceptivas. Na percepção dicas endógenas e exógenas têm dinâmicas temporais diferentes. Nós investigamos a eficácia e a dinâmica temporal da recuperação da informação armazenada na memória de trabalho visual utilizando dicas retroativas endógenas e exógenas. Nossos resultados mostram que as dicas retroativas endógena e exógena proporcionam um ganho equivalente na acurácia (d’) e no tempo de resposta, e que este ganho aumenta com a assincronia entre dica e estímulo teste. Nossos dados mostram que o ganho no desempenho está ligado tanto à validade da dica, como ao intervalo dica-estímulo, mas não aos diferentes tipos de dica, pelo menos nos intervalos investigados.

Out with the new, in with the old: Exogenous orienting to locations with physically constant stimulation.

Dominant methods of investigating exogenous orienting presume that attention is captured most effectively at locations containing new events. This is evidenced by the ubiquitous use of transient stimuli as cues in the literature on exogenous orienting. In the present study, we showed that attention can be oriented exogenously toward a location containing a completely unchanging stimulus by modifying Posner's landmark exogenous spatial-cueing paradigm. Observers searched a six-element array of placeholder stimuli for an onset target. The target was preceded by a decrement in luminance to five of the six placeholders, such that one location remained physically constant. This "nonset" stimulus (so named to distinguish it from a traditional onsetting transient) acted as an exogenous cue, eliciting patterns of facilitation and inhibition at the nonset location and demonstrating that exogenous orienting is not always evident at the location of a visual transient. This method eliminates the decades-long confounding of orienting to a location with the processing of new events at that location, permitting alternative considerations of the nature of attentional selection.

MTOR Cross-Talk in Cancer and Potential for Combination Therapy.

The mammalian Target of Rapamycin (mTOR) pathway plays an essential role in sensing and integrating a variety of exogenous cues to regulate cellular growth and metabolism, in both physiological and pathological conditions. mTOR functions through two functionally and structurally distinct multi-component complexes, mTORC1 and mTORC2, which interact with each other and with several elements of other signaling pathways. In the past few years, many new insights into mTOR function and regulation have been gained and extensive genetic and pharmacological studies in mice have enhanced our understanding of how mTOR dysfunction contributes to several diseases, including cancer. Single-agent mTOR targeting, mostly using rapalogs, has so far met limited clinical success; however, due to the extensive cross-talk between mTOR and other pathways, combined approaches are the most promising avenues to improve clinical efficacy of available therapeutics and overcome drug resistance. This review provides a brief and up-to-date narrative on the regulation of mTOR function, the relative contributions of mTORC1 and mTORC2 complexes to cancer development and progression, and prospects for mTOR inhibition as a therapeutic strategy.

Toward a Molecular Understanding of Abscisic Acid Actions in Floral Transition.

The transition from the vegetative growth phase to flowering is a crucial checkpoint for plant reproduction and survival, especially under environmental stress conditions. Numerous factors regulate flowering time, including exogenous environmental cues such as day length and temperature, as well as salt and drought stresses, and endogenous phytohormone signaling cascades. Gibberellins and ABA are one classic combination of phytohormones which antagonistically regulate several biological processes, including seed dormancy and germination, primary root growth and seedling development. As regards control of flowering time, gibberellin exhibits a positive role, and represents an important pathway in the regulation of floral transition. However, over the past decades, numerous investigations have demonstrated that the contribution of the stress hormone ABA to floral transition is still controversial, as both positive and negative effects have been documented. It is important to determine why and how ABA shows this contradictory effect on flowering time. In this up to date review, primarily based on recent publications and emerging data, we summarize the distinct and contrasting roles of ABA on floral transition, while the detailed molecular mechanisms underlying these roles are discussed. Finally, the remaining challenges and open questions in this topic are presented.

Several studies with significant C1 attention effects survive critical analysis

ABSTRACTIn a discussion paper (Slotnick, this issue), I conducted a selective review of spatial attention studies to compare experimental parameters and determine whether particular stimulus, task, or analysis conditions were more likely to produce significant attentional modulation of the event-related potential (ERP) C1 component. It was concluded that to maximize C1 attention effects, stimuli should be in the upper visual field, there should be distractors, conditions should be high perceptual or attentional load, there should be exogenous cuing, and effects should be measured at midline parietal-occipital electrodes POz, Pz, and CPz. Commentaries were received by Fu (this issue), Qu and Ding (this issue), Zani and Proverbio (this issue), Pitts and Hillyard (this issue), Di Russo (this issue), and Mohr and Kelly (this issue). Comments included additional ideas to amplify C1 attention effects, support for some conclusions, and challenges to some conclusions. The challenges led to a more in depth analysis of many issues pertaining to C1 attention effects including optimal electrode and stimulus locations, null V1 source localization attention effects, whether all significant C1 attention effects can be discounted, and the number of studies with null versus significant C1 attention effects. Analysis of the studies that survived critical analysis, which included several that observed significant C1 attention effects, led to the same conclusions as Slotnick (this issue). Lines of future research include replicating studies that have observed C1 attention effects using identical experimental parameters and systematically manipulating parameters to determine the impact of each parameter on C1 spatial attention effects.

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7

BackgroundFunctions for RNA-binding proteins in orchestrating plant development and environmental responses are well established. However, the lack of a genome-wide view of their in vivo binding targets and binding landscapes represents a gap in understanding the mode of action of plant RNA-binding proteins. Here, we adapt individual nucleotide resolution crosslinking and immunoprecipitation (iCLIP) genome-wide to determine the binding repertoire of the circadian clock-regulated Arabidopsis thaliana glycine-rich RNA-binding protein AtGRP7.ResultsiCLIP identifies 858 transcripts with significantly enriched crosslink sites in plants expressing AtGRP7-GFP that are absent in plants expressing an RNA-binding-dead AtGRP7 variant or GFP alone. To independently validate the targets, we performed RNA immunoprecipitation (RIP)-sequencing of AtGRP7-GFP plants subjected to formaldehyde fixation. Of the iCLIP targets, 452 were also identified by RIP-seq and represent a set of high-confidence binders. AtGRP7 can bind to all transcript regions, with a preference for 3′ untranslated regions. In the vicinity of crosslink sites, U/C-rich motifs are overrepresented. Cross-referencing the targets against transcriptome changes in AtGRP7 loss-of-function mutants or AtGRP7-overexpressing plants reveals a predominantly negative effect of AtGRP7 on its targets. In particular, elevated AtGRP7 levels lead to damping of circadian oscillations of transcripts, including DORMANCY/AUXIN ASSOCIATED FAMILY PROTEIN2 and CCR-LIKE. Furthermore, several targets show changes in alternative splicing or polyadenylation in response to altered AtGRP7 levels.ConclusionsWe have established iCLIP for plants to identify target transcripts of the RNA-binding protein AtGRP7. This paves the way to investigate the dynamics of posttranscriptional networks in response to exogenous and endogenous cues.

Spermine inhibits Vibrio cholerae biofilm formation through the NspS–MbaA polyamine signaling system

The aquatic bacterium and human intestinal pathogen, Vibrio cholerae, senses and responds to a variety of environment-specific cues to regulate biofilm formation. Specifically, the polyamines norspermidine and spermidine enhance and repress V. cholerae biofilm formation, respectively. These effects are relevant for understanding V. cholerae pathogenicity and are mediated through the periplasmic binding protein NspS and the transmembrane bis-(3'-5') cyclic diguanosine monophosphate (c-di-GMP) phosphodiesterase MbaA. However, the levels of spermidine required to inhibit biofilm formation through this pathway are unlikely to be encountered by V. cholerae in aquatic reservoirs or within the human host during infection. We therefore hypothesized that other polyamines in the gastrointestinal tract may control V. cholerae biofilm formation at physiological levels. The tetramine spermine has been reported to be present at nearly 50 μm concentrations in the intestinal lumen. Here, we report that spermine acts as an exogenous cue that inhibits V. cholerae biofilm formation through the NspS-MbaA signaling system. We found that this effect probably occurs through a direct interaction of spermine with NspS, as purified NspS protein could bind spermine in vitro Spermine also inhibited biofilm formation by altering the transcription of the vps genes involved in biofilm matrix production. Global c-di-GMP levels were unaffected by spermine supplementation, suggesting that biofilm formation may be regulated by variations in local rather than global c-di-GMP pools. Finally, we propose a model illustrating how the NspS-MbaA signaling system may communicate exogenous polyamine content to the cell to control biofilm formation in the aquatic environment and within the human intestine.

PbCOL8 is a clock-regulated flowering time repressor in pear

The floral transition is controlled by diverse endogenous and exogenous cues. In many species, COL (CONSTANS-like) genes integrate light and circadian clock signals to regulate flowering time. However, little is known about COLs in perennial woody plants. Here, we identified 15 PbCOLs in pear (Pyrus bretschneideri). PbCOLs were classified into three groups by phylogenetic tree analysis using protein sequences. Multiple sequence alignment analysis revealed conserved B-box and CCT (CO, CO-like, and TOC1) domains in all PbCOL members. This result suggested that PbCOLs might possess conserved functions as other species. Six PbCOLs were found to be regulated by both circadian clock and photoperiod. Here, we showed that PbCOL8, a member of group 2, suppressed the flowering signal integrators FT and SOC1 and could repress flowering time. These findings will contribute to elucidation of the mechanism of floral initiation in pear.

The experimental parameters that affect attentional modulation of the ERP C1 component

ABSTRACTThere is current debate as to whether spatial attention can modulate V1 activity during the initial wave of visual processing. Research on this topic has focused on the event-related potential (ERP) C1 component, which primarily reflects activity in V1. The purpose of the present selective review was to compare experimental parameters across spatial attention studies to determine whether certain stimulus, task, or analysis conditions were more likely to produce significant C1 attention effects. Specifically, C1 attention effects were evaluated as a function of visual field location, presence or absence of distractors, load (perceptual or attentional), cue type (endogenous or exogenous), and electrode location. As the C1 component has its peak magnitude at midline parietal-occipital electrodes, only studies that measured C1 attention effects at these electrode locations were considered. Furthermore, only studies that manipulated spatial attention, and no other factors, were considered. The current analysis indicated that to maximize sensitivity to C1 attention effects, stimuli should be in the upper visual field, there should be distractors, conditions should be high perceptual or attentional load, there should be exogenous cuing, and effects should be measured at midline parietal-occipital electrodes POz, Pz, and CPz.

Attentional biases for threat after fear-related autobiographical recall

ABSTRACTBackground: Previous studies suggested that affective state could enhance stimulus salience and modulate attention allocation for mood-congruent information, but contrasting data have been reported on the effects of mood induction on attentional biases for threat (ABTs) in non-clinical individuals.Objective: We aimed to assess whether laboratory-induced negative mood can increase individuals’ tendency to allocate attention on threatening stimuli, thus determining a difficulty in attentional disengagement from threat. We also aimed at assessing whether level of trait anxiety could modulate the effect of mood induction on attentional biases.Methods: We used an autobiographical episode recall procedure for mood induction (fear, happiness and neutral episode recall), and an exogenous cueing task with threatening and non-threatening images to assess attentional biases in 120 undergraduate students.Results: Participants showed a significant difficulty in disengaging attention from threat after recalling fear-related episodes, independently from their trait anxiety level.Conclusions: These findings clarify that the ABTs are not exclusive to anxiety disorders or high trait anxiety individuals, and could also arise in non-clinical individuals in a fearful context.

Visuo-spatial cueing in children with differential reading and spelling profiles.

Dyslexia has been claimed to be causally related to deficits in visuo-spatial attention. In particular, inefficient shifting of visual attention during spatial cueing paradigms is assumed to be associated with problems in graphemic parsing during sublexical reading. The current study investigated visuo-spatial attention performance in an exogenous cueing paradigm in a large sample (N = 191) of third and fourth graders with different reading and spelling profiles (controls, isolated reading deficit, isolated spelling deficit, combined deficit in reading and spelling). Once individual variability in reaction times was taken into account by means of z-transformation, a cueing deficit (i.e. no significant difference between valid and invalid trials) was found for children with combined deficits in reading and spelling. However, poor readers without spelling problems showed a cueing effect comparable to controls, but exhibited a particularly strong right-over-left advantage (position effect). Isolated poor spellers showed a significant cueing effect, but no position effect. While we replicated earlier findings of a reduced cueing effect among poor nonword readers (indicating deficits in sublexical processing), we also found a reduced cueing effect among children with particularly poor orthographic spelling (indicating deficits in lexical processing). Thus, earlier claims of a specific association with nonword reading could not be confirmed. Controlling for ADHD-symptoms reported in a parental questionnaire did not impact on the statistical analysis, indicating that cueing deficits are not caused by more general attentional limitations. Between 31 and 48% of participants in the three reading and/or spelling deficit groups as well as 32% of the control group showed reduced spatial cueing. These findings indicate a significant, but moderate association between certain aspects of visuo-spatial attention and subcomponents of written language processing, the causal status of which is yet unclear.

Epigenetics of human diseases and scope in future therapeutics.

Epigenetics is the study of nucleotide modifications that are heritable and act as regulatory mechanisms without changing the nucleotide sequence of the genome. Exogenous cues such as environment, lifestyle, nutrition, stress, and psychological factors affect epigenetic mechanisms. This mechanism is in concordance with the genetic information that plays an important role during prenatal and postnatal life of an individual. Recent epigenetic studies have revealed the potential of epigenetics in elucidating the mechanisms of different diseases. In this review, we discuss basic epigenetic mechanisms and their roles in health and disease. In addition, reported aberrations in epigenetic regulation for some common human diseases are described. Finally, we address some epigenetic approaches that have shown potential for targeted treatment of diseases.