Ex-situ Population Research Articles

Transcriptome data analysis provides insights into the conservation of Michelia lacei, a plant species with extremely small populations distributed in Yunnan province, China.

Michelia lacei W.W.Smith (Magnoliaceae), was classified as a Plant Species with Extremely Small Populations (PSESP) by the Yunnan Provincial Government in both action plans of 2012 and 2021. This evergreen tree is known for its high ornamental and scientific value, but it faces significant threats due to its extremely small population size and narrow geographical distribution. The study aims to understand the genetic structure, diversity, and demographic history of this species to inform its conservation strategies. The analysis of transcriptome data from 64 individuals across seven populations of M. lacei identified three distinct genetic clusters and generated 104,616 single-nucleotide polymorphisms (SNPs). The KM ex-situ population, originating from Longling County, exhibited unique genetic features, suggesting limited gene flow. The genetic diversity was substantial, with significant differences between populations, particularly between the KM lineage and the OTHER lineage. Demographic history inferred from the data indicated population experienced three significant population declines during glaciations, followed by periods of recovery. We estimated the effective population size (Ne) of the KM and OTHER lineages 1,000 years ago were 85,851 and 416,622, respectively. Gene flow analysis suggested past gene flow between populations, but the KM ex-situ population showed no recent gene flow. A total of 805 outlier SNPs, associated with four environmental factors, suggest potential local adaptation and showcase the species' adaptive potential. Particularly, the BZ displayed 515 adaptive loci, highlighting its strong potential for adaptation within this group. The comprehensive genomic analysis of M. lacei provides valuable insights into its genetic background and highlights the urgent need for conservation efforts. The study underscores the importance of ex-situ conservation methods, such as seed collection and vegetative propagation, to safeguard genetic diversity and promote population restoration. The preservation of populations like MC and BZ is crucial for maintaining the species' genetic diversity. In-situ conservation measures, including the establishment of in-situ conservation sites and community engagement, are essential to enhance protection awareness and ensure the long-term survival of this threatened plant species.

Report of leucism in tadpoles of Ceratophrys stolzmanni (Amphibia, Anura, Ceratophryidae) in laboratory

ABSTRACT We report the first cases of leucism in Ceratophrys stolzmanni larvae. The leucistic individuals were recorded in an ex-situ population for conservation and research of the species, within the Conservation Initiative for Threatened Amphibians “Balsa de los Sapos” [Raft for Frogs] at the Pontificia Universidad Católica del Ecuador. These individuals presented different color traits from those of the same cohort and as they grew older their uniform white coloration was defined. The leucistic individuals died as tadpoles, after time periods that exceeded the ones reported and recorded for ending metamorphosis in the species, suggesting a link between the absence of pigmentation and a potential malfunction of the thyroid gland.

Metabolomic profiling implicates mitochondrial and immune dysfunction in disease syndromes of the critically endangered black rhinoceros (Diceros bicornis)

The critically endangered black rhinoceros (Diceros bicornis; black rhino) experiences extinction threats from poaching in-situ. The ex-situ population, which serves as a genetic reservoir against impending extinction threats, experiences its own threats to survival related to several disease syndromes not typically observed among their wild counterparts. We performed an untargeted metabolomic analysis of serum from 30 ex-situ housed black rhinos (Eastern black rhino, EBR, n = 14 animals; Southern black rhino, SBR, n = 16 animals) and analyzed differences in metabolite profiles between subspecies, sex, and health status (healthy n = 13 vs. diseased n = 14). Of the 636 metabolites detected, several were differentially (fold change > 1.5; p < 0.05) expressed between EBR vs. SBR (40 metabolites), female vs. male (36 metabolites), and healthy vs. diseased (22 metabolites). Results suggest dysregulation of propanoate, amino acid metabolism, and bile acid biosynthesis in the subspecies and sex comparisons. Assessment of healthy versus diseased rhinos indicates involvement of arachidonic acid metabolism, bile acid biosynthesis, and the pentose phosphate pathway in animals exhibiting inflammatory disease syndromes. This study represents the first systematic characterization of the circulating serum metabolome in the black rhinoceros. Findings further implicate mitochondrial and immune dysfunction as key contributors for the diverse disease syndromes reported in ex-situ managed black rhinos.

Hope is the last thing lost: Colombian captive-bred population of the critically endangered Orinoco crocodile (Crocodylus intermedius) is a genetic reservoir that could help to save the species from extinction

A purpose of ex-situ populations is the preservation of genetic variation, but this is a challenging task since genetic diversity is commonly lost through each generation, and so the establishment of management guidelines should be a high priority. Fifty years ago, the National University of Colombia began a breeding program in the Roberto Franco Tropical Station (in Villavicencio, Meta) to conserve the critically endangered Orinoco crocodile Crocodylus intermedius. Despite the large number of individuals raised and kept in captivity, the Station has not been able to release individuals due to a lack of a complete genetic characterization that could determine whether the population is genetically viable. In this study we used a panel of 17 microsatellite loci to overcome this problem. We estimated from the founder animals and the live crocodiles the inbreeding, heterozygosities, the number of alleles, and their richness, and frequencies to understand the effects of managing a captive breeding program without considering genetic profiles. Our results revealed that the living population maintains much of its founder diversity with high levels of heterozygosity and low overall inbreeding, making it suitable for maintaining captive breeding and for implementing wild releases. We estimated the individual genetic diversity of the living crocodiles, as well as their relationships. This information, combined with the size, sex, and location, allowed us to propose combinations and to restructure the breeding groups. We demonstrated that molecular data could be used to improve the management of ex-situ conservation programs well beyond what could be achieved with pedigree information alone.

Activity budgets, responses to disturbance and novel behaviours in captive mountain chicken frogs Leptodactylus fallax

Mountain chicken frogs Leptodactylus fallax are assessed as Critically Endangered on the IUCN Red List due to threats including chytridiomycosis and habitat loss. Ex-situ populations underpin species survival, but captive management is hampered by incomplete species knowledge, including its behavioural biology. In sixteen adult frogs, we investigated enclosure usage, nocturnal activity budgets, and behavioural responses to varying levels of husbandry-related disturbance through instantaneous scan sampling of camera trap footage over forty-two consecutive nights. Enclosure usage was quantified through the application of modified Spread of Participation Indices (mSPI). We present the first detailed activity budgets published for this species and found that broad activity patterns of captive animals corresponded well with their wild conspecifics; taking refuge during the day and emerging at dusk into exposed areas of the enclosure. Some behaviours, especially hunting and bathing, were partially phased throughout the nocturnal period. Enclosure use was not even, with disproportionately large amounts of time spent using nest boxes and deep leaf litter, even at night, and the converse in thin leaf litter and elevated perches. Principal Components Analysis (PCA) identified a bold-shy behavioural grouping (movement and resting opposed to refuge behaviours) that was consistent across husbandry-related disturbance conditions. Randomisation analyses showed that disturbance significantly affected multiple measured behaviour, especially feeding, social interactions and vocalisation; the impact was associated with the degree of disturbance. Novel behaviours were also documented, which are thought to be related to courtship. Our data provide insights into the behaviour of mountain chicken frogs and highlight potential trade-offs between enclosure maintenance, veterinary intervention, and animal welfare. Keywords: Amphibians, behaviour, mSPI, disturbance, welfare, Zoo

Reproductive Biology and Pollination Ecology of Fritillaria michailovskyi Fomin (Liliaceae), Endemic to East Anatolia (Turkey)

Fritillaria is highly endangered in their natural habitats, and these species are perennial bulbous plants with an important medicinal and ornamental value whose reproductive strategies and adaptive evolution mechanisms are still not fully clear. Therefore, the reproductive strategies of endemic species, like Fritillaria michailovskyi Fomin are important to detect the community structure and the diversity patterns of ornamental plants. The current paper on the reproductive strategy of F. michailovskyi, a rare endemic species, was carried out at the Erzincan Horticultural Research Institute, Turkey. Our results indicate that the flowering stages of F. michailovskyi may be divided into eight phases. According to pollination experiments and the pollen/ovule ratio, and the self-incompatibility index (SII) in an ex-situ population, F. michailovskyi indicated high levels of xenogamy and self-incompatibility. It was determined that the pollination of F. michailovskyi mostly depended on pollen vectors, and the effective pollinators of F. michailovskyi were Apis mellifera and Bombus terrestris. In addition, average seed number, seed germination, and average seed viability were found as 144, 46%, and 67%, respectively. The stigma receptivity, pollen grains, and pollen viability were detected as 83%, 252,000, and 95%, respectively. Our study is the first report providing a detailed explanation of the reproductive strategy of this rare endemic species, which could aid in the genetic evolution and conservation of this valuable taxa.

VINTERGATAN-GM: The cosmological imprints of early mergers on Milky-Way-mass galaxies

ABSTRACTWe present a new suite of cosmological zoom-in hydrodynamical ($\approx 20\, \mathrm{pc}$ spatial resolution) simulations of Milky-Way mass galaxies to study how a varying mass ratio for a Gaia-Sausage-Enceladus (GSE) progenitor impacts the z = 0 chemodynamics of halo stars. Using the genetic modification approach, we create five cosmological histories for a Milky-Way-mass dark matter halo ($M_{200}\approx 10^{12} \, \mbox{M}_\mathrm{\odot }$), incrementally increasing the stellar mass ratio of a z ≈ 2 merger from 1:25 to 1:2, while fixing the galaxy’s final dynamical, stellar mass, and large-scale environment. We find markedly different morphologies at z = 0 following this change in early history, with a growing merger resulting in increasingly compact and bulge-dominated galaxies. Despite this structural diversity, all galaxies show a radially biased population of inner halo stars like the Milky-Way’s GSE which, surprisingly, has a similar magnitude, age, $\rm [Fe/H]$, and $\rm [\alpha /Fe]$ distribution whether the z ≈ 2 merger is more minor or major. This arises because a smaller ex-situ population at z ≈ 2 is compensated by a larger population formed in an earlier merger-driven starburst whose contribution to the GES can grow dynamically over time, and with both populations strongly overlapping in the $\rm [Fe/H]-\rm [\alpha /Fe]$ plane. Our study demonstrates that multiple high-redshift histories can lead to similar z = 0 chemodynamical features in the halo, highlighting the need for additional constraints to distinguish them, and the importance of considering the full spectrum of progenitors when interpreting z = 0 data to reconstruct our Galaxy’s past.

Utilising routine non-invasive faecal samples for the detection of oestrus and early gestation in okapi (Okapi johnstoni)

Zoos play a vital role in conservation with an overall aim of preserving species, such as the okapi (Okapi johnstoni), from extinction. To ensure species survival, sustainable ex-situ populations are required, and therefore understanding the reproductive status of individuals is important for population management. In this study, the oestrous cycles and gestations of four okapi (n = 7 pregnancies) were monitored through non-invasive faecal sampling methods to quantify progestagen and oestrogen metabolites. Baseline criteria for determining oestrous cycles was developed using approximately 20 months of sampling from each of two non-pregnant females, before being applied to pre- and early conception data. Pre-conception oestrous cycles were characterised in two females with luteal phase (mean ± SD) was 8.47 ± 1.41 days (n = 59) with an inter-luteal phase of 7.38 ± 1.67 days (n = 58), and overall average cycle length of 15.83 ± 2.02 days (n = 54 full cycles only). Observed in all four females, oestrogen metabolite peaks occurred at the beginning of the inter-luteal phase as progestagen metabolites were decreasing. Gestation was confirmed when progestagen metabolite concentrations remained at luteal phase concentrations for at least 20 days, with concentrations remaining at this level for the first 120 days of gestation without return to baseline values. A secondary increase at around 150 days lasted until parturition. These data demonstrate that okapi exhibit similar oestrous cycles to other members of the giraffidae family, with faecal oestrogens for the first time indicating that ovulation occurs at the beginning of the inter-luteal phase while progestagens are still elevated. Furthermore, we have shown that through routine sample collection and hormone monitoring, gestation can be confirmed within the first trimester, which can benefit the management of the species in ex-situ populations.

Hormonal variation and temporal dynamics of musth in Asian elephants (Elephas maximus) are associated with age, body condition and the social environment.

The sustainability of endangered Asian elephants in human care is threatened in part by low breeding success and concerns over individual animal wellbeing. Male elephants have received less research attention compared to females, yet males deserve special consideration due to their unique reproductive biology (particularly the sexual state of "musth") and the complex interaction of physiological, environmental, and social pressures they face. We measured fecal androgen metabolites (FAMs), fecal glucocorticoid metabolites (FGMs), and fecal triiodothyronine metabolites (FT3s) collected weekly over approximately 12months from 26 male Asian elephants housed in zoos across the US, hypothesizing that FAM, FGM, and FT3 concentrations would be associated with temporal correlates of musth and would vary further with intrinsic (musth status, age, body condition) and extrinsic (social environment) factors. The duration of each musth episode was positively associated with exposure to male conspecifics and negatively associated with body condition. Further, elevated FAM concentrations were associated with social exposure, age, and body condition, and FGM concentrations also varied with age and body condition. FT3 concentrations were not associated with any factor we measured. We also identified periods of lower FAM concentration than confirmed musth episodes (but still higher than baseline FAM concentrations) that we termed "elevated FAM episodes." The durations of these episodes were negatively correlated with exposure to other male elephants. Together, these results provide evidence that hormone profiles (including those that are predicted to change around musth) vary significantly between male Asian elephants in a way that may be attributed to intrinsic and extrinsic factors. Studies like these serve to enhance the sustainability of ex-situ populations by providing wildlife managers with information to enhance the health, welfare, and reproduction of threatened species like Asian elephants.

Genetic Diversity of the Endangered Endemic Anoa (Bubalus spp): Implication for Conservation

Anoa is an endemic ungulate in Sulawesi and its status now is endangered because the population continues to decline. Conservation genetics is one of the crucial issues in the anoa conservation strategy and action plan 2013-2022 document, but this genetic data is not yet available. To investigate and provide valuable information for conservation genetics measures, thirteen polymorphic microsatellites were used to analyze 20 adult anoa. Anoa has relatively low genetic diversity within populations (HO = 0.58), and high genetic differentiation among populations (FST = 0157). Although the anoa population has a bottleneck signal (T.P.M: 0.019; P0.05), the bottleneck simulation results show that the loss of genetic diversity is being slow over the next 100 years (9.5%). We provide some recommendations for conservation genetics based on the findings in this paper, including monitoring and genetically mapping for other anoa populations due to bottleneck signals, establishing the founder of the ex-situ population by examining their genetic diversity status, maintaining and increasing the number of individuals in the ex-situ population to genetically safe population size, and managing anoa populations by avoiding inbreeding. In-situ and ex-situ conservation programs should be combined to maintain the genetic diversity of anoa.

Behavioral characterization of musth in Asian elephants (Elephas maximus): Defining progressive stages of male sexual behavior in in-situ and ex-situ populations

Complementary studies of wild and zoo-housed animals offer insight into behavioral variation across a range of conditions including the context under which various behaviors evolved in natural settings. This information can be used to improve the sustainability of in-situ and ex-situ populations and enhance the well-being of individuals. Managed ex-situ populations are critical to the long-term existence of Asian elephants, yet relatively little is known about male reproductive behavior compared to females. Male elephants undergo a unique sexual state called “musth” that further complicates in-situ and ex-situ management strategies. The ability to manage musth males to enhance breeding success and overall wellness of elephants is dependent upon better understanding how intrinsic and extrinsic factors influence male behavioral variation around musth. Here, we observed 62 free-ranging male Asian elephants in Sri Lanka and compared their behavior to observations from 26 elephants managed in facilities around the US. We hypothesized that musth is associated with significant behavioral changes that can be used to define distinct stages in the progression of musth. During observations, we quantified environmental variables and recorded musth status of each focal elephant using visual indicators (temporal gland secretions and urine dribbling). We showed that musth’s behavioral correlates (including changes in locomotion, foraging, alertness, and chemosensory behavior) were remarkably similar in wild and zoo-housed elephants. We also found that behavioral variation around musth was also associated with intrinsic (e.g., musth stage, age) and extrinsic factors (e.g., space availability, temperature) in zoo-housed, but not wild, elephants, indicating that musth is potentially plastic in changing environments. As musth progressed, we noted distinct behavioral signatures that define four stages of sexual activity in male elephants: non-musth, early musth, full musth, and post-musth. Finally, although we did not observe significant changes in overall social behavior (including aggression) during musth, we found that elephants increased the frequency with which they displayed certain behaviors associated with communication (e.g., alertness, chemosensory behavior, ear-flapping) in both populations. Together, these results indicate the significant behavioral changes that occur during musth in wild and zoo-housed elephants, and that musth progresses in distinct behavioral stages that can be easily distinguished by visual indicators. Studies like these serve to provide wildlife managers with information about a species’ unique, evolved behavioral strategies and how these seemingly fixed behaviors may be influenced by intrinsic and extrinsic factors in predictable ways.

Genetic purity of a rear-edge population of Carex podogyna Franch. et Sav. (Cyperaceae) maintained under interspecific hybridization.

Interspecific hybridization is a critical issue in conservation biology because it may drive small populations to extinction through direct or indirect processes. In this study, to develop a conservation strategy for an endangered rear-edge population of Carex podogyna in Ashiu, Kyoto, Japan, we performed a molecular genetic analysis of the wild population and an ex-situ population established from wild seeds. Microsatellite genotypic data revealed a complete loss of genetic diversity in the wild population, suggesting that it has long been prone to genetic drift due to isolation as a small population. In contrast, microsatellite analysis of 13 ex-situ individuals detected multiple alleles that are not harbored in the wild C. podogyna population. Sequence analysis revealed that these individuals are likely natural hybrids between C. podogyna and a co-occurring species, C. curvicollis, although established hybrids have never been found in the natural habitat. Based on our observation of variegated leaves in hybrid individuals, we propose that hybrids have been excluded by natural selection and/or interspecific competition caused by insufficient productivity of photosynthesis, although other genetic and ecological factors may also be influential. Overall, this study indicates that natural mechanisms selectively removing the hybrids have maintained the genetic purity of this rear-edge population of C. podogyna, and also emphasizes the importance of genetic assessment in ex-situ conservation programs.

Père David's Deer (Elaphurus davidianus) in China: Population Dynamics and Challenges

The reintroduction of rare and endangered species is one of the most important approaches to conservation and ecosystem restoration, but it has still proven to be an adventurous undertaking and most reintroduction programmes fail, so successful demonstrations are needed. Père David's deer (Elaphurus davidianus, Milu in Chinese) could be considered one of conservation's great success stories, as this species' path on the road to extinction has been reversed by a combination of ex-situ conservation and successful re-introduction in China. The species had been consigned to an imperial hunting ground when the last Chinese herds were exterminated during the fall of the Qing Dynasty (1644–1912). Fortunately, a few of the last remaining individuals were sent to European zoos. From these animals, a herd was bred on the 14th Duke of Bedford's estate, Woburn Abbey, and between 1985 and 1987, and 38 Milu were donated back to China for re-introduction in Beijing Milu Park (BMP), the former imperial hunting ground. An additional 39 deer were released at Dafeng National Nature Reserve (DFNNR), Jiangsu Province in 1986. In both of these safe and protected locations, the Milu thrived allowing for over 700 Milu to be sent to a further 82 sites throughout the species' original Chinese range over the last 36 years. As a result, the Milu population totaled 9136 by 2021, with 2855 individuals now living back in the wild; while another 5681 individuals inhabit the DFNNR, and 186 reside in BMP. Wild Milu, however, still face significant conservation challenges. The population lacks genetic diversity, leading to severe inbreeding depression and carrying multiple risks, such as high miscarriage rates, a reduced lifespan, and susceptibility to disease. Environmental constraints such as pollution and habitat fragmentation further result in small, fragmented wild populations. Moreover, the species currently lacks a national level conservation master plan, the associated coordinated monitoring platforms, and breeding plans for China's captive populations. Finally, there is now a lack of international cooperation in the conservation of this species. We therefore call for both a national-level conservation master plan in China and international cooperation to develop a shared database and germplasm databank covering Milu across all countries with ex-situ populations, as crucial steps for securing the long-term conservation of Milu and preventing it from ever becoming “extinct in the wild” again.

Captive husbandry and breeding of the Nguru spiny pygmy chameleon Rhampholeon acuminatus

The Nguru spiny pygmy chameleon (Rhampholeon acuminatus) is endemic to the Nguru mountains in Tanzania. It is assessed as Critically Endangered and is collected from the wild for the pet trade. An ex-situ population of this species was recently established at The Wild Planet Trust, Paignton Zoo, in the hope of learning more about the husbandry and biology of this species. We report on the captive husbandry of adults and the successful breeding, hatching and rearing of juveniles. Females carried four eggs but laid them in pairs. When eggs were incubated at 19.2-22.8 °C, hatchlings emerged roughly 180 days after laying. The hatchlings had a total length of about 30 mm and weighed 0.2-0.3 g. To our knowledge, this is the first published account of captive breeding for this species. The husbandry methods described could be used to establish populations of this and other Rhampholeon species in captivity, which in turn would reduce the demand for wild caught (Rhampholeon), as well as inform future conservation breeding programmes for this species.

Genetic diversity and species identity of the critically endangered Rote Island snake-necked turtle, Chelodina mccordi Rhodin, 1994

The endemic Chelodina mccordi is considered extinct in the wild; however, ex-situ populations are thriving and sampled for our genetic diversity assessment. We used three sequences resulting from blood and tissue samples of five individual turtles amplified for 650-bp cytochrome oxidase I (COI) fragment of the mitochondrial DNA. We analysed a total of 30 barcoding DNA sequences for phylogenetic relationships and genetic distances among Chelodina spp. Nucleotide diversity of eight C. mccordi samples is 0.007 ± 0.001 with a haplotype diversity of 0.893 ± 0.086. All these samples form a monophyletic clade that is sister to a clade of Australian and New Guinean long-necked turtles. Genetic distances calculated using Kimura 2-paramater model among C. mccordi sequences range between 0.2% and 1.5%, while a few others are without distance. The shortest genetic distance is between individuals from Rote Island, whereas the longest distance was found between individuals, each of which was derived from parental stocks originating in Rote and Timor islands. A genetic distance of 1.1% - 1.5% is likely to denote distinction at subspecies level. Results of this study could help in reintroducing captive individuals into their natural habitats. Thus, captive breeding programme of this species may help its conservation.

Mapping accreted stars in early-type galaxies across the mass–size plane

ABSTRACT Galaxy mergers are instrumental in dictating the final mass, structure, stellar populations, and kinematics of galaxies. Cosmological galaxy simulations indicate that the most massive galaxies at z = 0 are dominated by high fractions of ‘ex-situ’ stars, which formed first in distinct independent galaxies, and then subsequently merged into the host galaxy. Using spatially resolved MUSE spectroscopy we quantify and map the ex-situ stars in thirteen massive early-type galaxies. We use full spectral fitting together with semi-analytic galaxy evolution models to isolate the signatures in the galaxies’ light which are indicative of ex-situ populations. Using the large MUSE field of view we find that all galaxies display an increase in ex-situ fraction with radius, with massive and more extended galaxies showing a more rapid increase in radial ex-situ fraction (reaching values between ∼30 per cent and 100 per cent at 2 effective radii) compared to less massive and more compact sources (reaching between ∼5 per cent and 40 per cent ex-situ fraction within the same radius). These results are in line with predictions from theory and simulations which suggest ex-situ fractions should increase significantly with radius at fixed mass for the most massive galaxies.

Amendments suggested for zoo medical research strategies with focus on the D-A-CH region.

Scientific exploration of zoo animals is one of the main missions of modern zoos. As scientific achievements are best reflected within scientific literature, we screened appropriate literature search outcomes from the 5 highest ranked zoos in the D-A-CH region (Germany-Austria-Switzerland) in order to deduce suggestions for optimizations of future research strategies. Literature search was done by entering "Zoo Vienna", "Tiergarten Schönbrunn", "Zoo Berlin", "Tiergarten Berlin", "Tierpark Hellabrunn", "Tierpark Hagenbeck", and "Zoo Zurich" on PubMed and Scopus for the period 2000-2020. These 5 European zoos were chosen due to their broad public recognition and international importance. Inclusion criterion for the literature list was the description/mentioning of analysed animals or samples with a clear affiliation to the respective zoo in the materials and methods or acknowledgements sections. Search hits were then allocated to the following 7 areas: animal nutrition, biology, ethology, infectiology, reproduction, phylogenetics, and clinical medicine. Also, portions of higher animal taxa (and species, if appropriate) were recorded. A total of 142 papers has been published. Mammals, especially large ones, were clearly over-represented in literature with 2 thirds of analysed papers dealing with them. Sauropsids (birds and reptiles) were treated in 28 % and non-amniotic vertebrates (amphibians and fish) as well as invertebrates in only 3 % each. This apportionment is in no relation to the species numbers of the respective higher animal taxa. The predominating research areas (covered by approximately 75 % of papers) were ethological studies, followed by papers on infectious diseases, and finally papers on biology with morphological, physiological, and molecular biological themes. Research on reproductive biology/medicine, which is considered to be of tremendous importance for the establishment of ex-situ populations and thus for the conservation of endangered species, has been covered by only 6 % of papers. Future research should more intensely keep an eye on that discipline, especially in non-mammalian vertebrates.

Shifts in leaf herbivory stress and defense strategies of endangered tree species after 20–35 years of ex-situ conservation

Ex-situ conservation, the transplanting of individuals outside of their natural range, can dramatically alter biotic interactions among species. Here, we explored the shifts in the herbivory pressure and defense strategies of ex-situ populations of five endangered tree species (Pterostyrax psilophyllus, Davidia involucrata, Dipteronia sinensis, Tapiscia sinensis, and Tetracentron sinense) after 20–35 years since translocation. All species were not native to the ex-situ site and only P. psilophyllus had a closely related native species (Pterostyrax corymbosus). We compared the leaf damage type, herbivory rate, and chemistry (total phenols, tannins, N, and P) of each species, and assessed the relationship between the herbivory rate and leaf chemistry between the ex-situ and wild populations. Excluding P. psilophyllus, all species in the ex-situ populations showed changes in the type of leaf damage and lower overall herbivory rates. Ex-situ populations of P. psilophyllus showed reduced total phenol, N, and P levels, while the other four species showed decreased total phenol and tannin levels, or increased N and P levels. The herbivory rate was positively correlated with the N and P levels in wild populations, and negatively correlated with the total phenol content in ex-situ populations. These differences reflect the reduced herbivory pressure, decreased defense ability, and shift in defense strategy of ex-situ populations. We showed that prolonged exposure to the ex-situ environment led to the maladaptation of these endangered plant species to herbivory pressure in the natural environment, and that these shifts should be considered in ex-situ conservation and reintroduction strategies.

White-naped mangabeys\u2019 viable insurance population within European Zoo Network

The success and viability of an ex-situ conservation program lie in the establishment and potential maintenance of a demographically and genetically viable insurance population. Such population reserve may support reintroduction and reinforcement activities of wild populations. White-naped mangabeys are endangered restricted-range African primates which have experienced a dramatic population decrease in their natural habitats over the last few decades. Since 2001, some European zoos singularly monitor an ex-situ population aiming to seek the recovery of the current wild population. The aim of the present paper is to evaluate the genetic status and population demographics of European zoo-captive white-naped mangabeys based on pedigree data. The captive population is gradually growing and preserves specific reproductive and demographic parameters linked to the species. The intensive management program that is implemented has brought about the minimization of inbreeding and average relatedness levels, thus maintaining high levels of genetic diversity despite the existence of fragmented populations. This finding suggests white-naped mangabey ex-situ preservation actions may be a good example of multifaceted conservation throughout studbook management which could be used as a model for other ex-situ live-animal populations.

Meta-analysis of genetic representativeness of plant populations under ex situ conservation in contrast to wild source populations.

Ex-situ conservation is widely used to protect wild plant species from extinction. However, it remains unclear how genetic variation of ex-situ plant collections reflects wild source population diversity. Here, we conduct a global meta-analysis of the genetic representativeness of ex-situ populations by comparing genetic diversity (i.e. AR, allelic richness; HE , expected heterozygosity; PPB, percentage polymorphic bands; and SWI, Shannon-Winner index), inbreeding coefficient (FIS ), and genetic differentiation between ex-situ plant collections and their wild source populations. Genetic diversity (i.e., HE , PPB, and SWI) was significantly lower in ex-situ populations than their wild source populations, while genetic differentiation between ex-situ and wild populations (ex-situ-wild FST ), but not that among ex-situ populations, was significantly higher than among wild populations. Outcrossing species, but not those with mixed mating system, had significantly lower genetic diversity in ex-situ populations, and significantly higher ex-situ-wild FST . When the collection size for ex-situ conservation was ≥30 or 50, PPB, HE , and ex-situ-wild FST were not significantly different between ex-situ and wild populations, indicating a relatively high genetic representativeness. Collecting from the entire natural distribution range and mixing collections from different sources could significantly increase the genetic representativeness of ex-situ populations. Type of ex-situ conservation (i.e., planting or seed bank) had no effect on genetic representativeness. The effect size of HE decreased and the effect size of ex-situ-wild FST increased with the duration of ex-situ conservation. Our results suggest that current ex-situ plant collections do not effectively capture the genetic variation of wild populations. Low genetic representativeness of ex-situ populations was caused by both initial incomplete sampling from wild populations and genetic erosion during ex-situ conservation. We emphasize that it is necessary to employ more thorough sampling strategies in future collecting efforts and to add new individuals where needed. Article impact statement: Low genetic representativeness of living plant collections is a worldwide problem in ex situ conservation. This article is protected by copyright. All rights reserved.