Entire Gradient Research Articles

Old forest structural development drives complexity of nest webs in a naturally disturbed boreal mixedwood forest landscape

Structural complexity generated by forest development processes and tree species compositional changes provide key habitat features for vertebrate communities that rely upon tree size and decay processes for foraging, denning or nesting. Complexity of forest structure in old stands could not only be key for harboring increased taxonomic species diversity but also greater functional diversity through more complexity in networks of tree cavity dependent species. Using a nest web approach that hierarchically links cavity-bearing trees with cavity formation agents (natural decay processes and avian excavators) and cavity users (non-excavator species), we compared network characteristics of nest webs along a time since fire gradient in a naturally disturbed boreal mixedwood forest landscape in eastern North America. Since 2003, twelve 24 to 40 ha plots ranging from 61 to more than 245 years after fire were surveyed at the Lake Duparquet Research and Teaching Forest in Abitibi, Quebec, Canada to detect active nesting, and denning cavities. We found that network complexity both in terms of number of vertebrate species and number of interactions among species, increased along the age gradient and was significantly higher in the older stands than predicted by chance. Whereas cavity-nesting communities in old forests used a higher diversity of tree species over a wide range of decay stages, trembling aspen remained a key cavity-bearing tree throughout the age gradient. Woodpeckers were the main cavity formation agents whereas less than 1% of cavities originated from natural decay. The structural development of older forests is thus a driver for functional diversity in cavity-using vertebrate communities through higher interaction richness in nest webs, among cavity-bearing trees, excavators and non-excavating users. The pivotal contribution of the entire gradient of old forest cover types to the overall complexity of nest webs in the boreal mixedwood zone is also a key for the resilience of the cavity-using vertebrate community to natural disturbances. We discuss how such resilience may be compromised by even-aged industrial timber harvesting with short rotations that shifts the age structure of boreal landscapes toward regenerating and young pole forests whereas old forest cover types become below their historical range of variability.

Understanding the Distributions of Benthic Foraminifera in the Adriatic Sea with Gradient Forest and Structural Equation Models

In the last three decades, benthic foraminiferal ecology has been intensively investigated to improve the potential application of these marine organisms as proxies of the effects of climate change and other global change phenomena. It is still challenging to define the most important factors affecting foraminiferal communities and derived faunistic parameters. In this study, we examined the abiotic-biotic relationships of foraminiferal communities in the central-southern area of the Adriatic Sea using modern machine learning techniques. We combined gradient forest (Gf) and structural equation modeling (SEM) to test hypotheses about determinants of benthic foraminiferal assemblages. These approaches helped determine the relative effect of sizes of different environmental variables responsible for shaping living foraminiferal distributions. Four major faunal turnovers (at 13–28 m, 29–58 m, 59–215 m, and >215 m) were identified along a large bathymetric gradient (13–703 m water depth) that reflected the classical bathymetric distribution of benthic communities. Sand and organic matter (OM) contents were identified as the most relevant factors influencing the distribution of foraminifera either along the entire depth gradient or at selected bathymetric ranges. The SEM supported causal hypotheses that focused the factors that shaped assemblages at each bathymetric range, and the most notable causal relationships were direct effects of depth and indirect effects of the Gf-identified environmental parameters (i.e., sand, pollution load Index–PLI, organic matter–OM and total nitrogen–N) on foraminifera infauna and diversity. These results are relevant to understanding the basic ecology and conservation of foraminiferal communities.

Structure and metabolic potential of the prokaryotic communities from the hydrothermal system of Paleochori Bay, Milos, Greece.

Shallow hydrothermal systems share many characteristics with their deep-sea counterparts, but their accessibility facilitates their study. One of the most studied shallow hydrothermal vent fields lies at Paleochori Bay off the coast of Milos in the Aegean Sea (Greece). It has been studied through extensive mapping and its physical and chemical processes have been characterized over the past decades. However, a thorough description of the microbial communities inhabiting the bay is still missing. We present the first in-depth characterization of the prokaryotic communities of Paleochori Bay by sampling eight different seafloor types that are distributed along the entire gradient of hydrothermal influence. We used deep sequencing of the 16S rRNA marker gene and complemented the analysis with qPCR quantification of the 16S rRNA gene and several functional genes to gain insights into the metabolic potential of the communities. We found that the microbiome of the bay is strongly influenced by the hydrothermal venting, with a succession of various groups dominating the sediments from the coldest to the warmest zones. Prokaryotic diversity and abundance decrease with increasing temperature, and thermophilic archaea overtake the community. Relevant geochemical cycles of the Bay are discussed. This study expands our limited understanding of subsurface microbial communities in acidic shallow-sea hydrothermal systems and the contribution of their microbial activity to biogeochemical cycling.

Studies of Brazilian birds along altitudinal gradients: a critical review

Brazil is home to many mountain ranges which harbor diverse avifauna. However, studies on the altitudinal distribution of Brazilian birds are still few and many have never been published, hampering both the dissemination of basic information and conservation actions. Here we present a critical review of ornithological studies undertaken in Brazilian mountain ranges, and propose a classification of geographic scope, altitudinal gradient, and methodology. Since 1922, 184 ornithological studies included altitude in some way in Brazil, encompassing a variety of research topics and species. About a quarter of these studies were never published in peer-reviewed journals, and 39% do not provide basic data on elevation nor link the bird species with sampling plots, thus limiting their applicability. The majority of studies are concentrated (83%) in southern and southeastern Brazil, especially in the Serra do Mar range, and so most data are associated with the Atlantic Forest. Gaps remain in other regions, such as Amazonia (Pantepui region). Most studies either did not sample the entire elevation gradient, were not standardized, lacked explicit hypothesis, or did not account for a seasonal sampling embracing the four seasons of the year, so interpretation of the observed patterns remains difficult. With this compilation, we organize the available information and point to future altitudinal research on birds, in addition to highlighting the importance of preserving habitats along altitudinal gradients in the mountainous regions in Brazil.

Seasonal and diel modulation of DOM in a mangrove-dominated estuary.

Rivers and estuaries are the main links between continents and oceans. The Paraíba do Sul River is among the most important rivers of the southeastern Brazilian region, carrying an average of 0.08 Tg of dissolved organic matter (DOM) to the ocean but has been facing significant changes in river discharge. In this study, we aimed to provide insights into the sources and transformations of chromophoric dissolved organic matter (CDOM) and fluorescent dissolved organic matter (FDOM) sources across a salinity gradient under changing river discharge scenarios. Three spatial surveys were performed covering the entire salinity gradient of the main estuarine channel and surrounding mangrove waters under contrasting river discharge (178 to 1240 m3 s-1), and diel sampling was conducted in the mangrove tidal creek. The characterization of DOM through the parallel factor analysis (PARAFAC) model identified six components across the river-ocean gradient and mangrove creek: terrestrial origin (C1 - fulvic acid and C2 and C3 - humic-like), protein-like (C4), tryptophan-like (C5), and tyrosine-like (C6). Our results showed a shift in DOM composition and contribution along the salinity gradient, from terrestrial (C3) to autochthonous (C5 and C6) signatures. The October-17 dry campaign was characterized by a higher proportion of microbial protein-like component C4 and a lower contribution of humic-like components compared to February-17 and March-18 across the salinity gradient with an increase in the mixing zone. The DOM compositions of the February 17 dry and March 18 wet campaigns were similar. Additionally, the March-18 wet campaign, marked by the highest river discharge, showed higher inputs of terrestrial DOM (C1-C3 components) compared to February-17 in the estuary, which allowed DOM to be transported rather than transformed. The mangrove diel study showed that tidal fluctuations are also an important driver of carbon input to the mangrove creek with a possible impact on DOM composition in estuarine waters.

Effects of forest management on the conservation of bird communities in eastern North America: A meta‐analysis

AbstractForest management affects conditions for both early‐ and late‐seral organisms, and managers and conservationists require information for balancing the ostensibly opposing habitat needs of both these guilds. We conducted meta‐analyses that examined silvicultural systems with a range of postharvest retention and their impacts on mature‐forest and shrubland bird species densities in eastern North America during the breeding season. Densities of mature‐forest bird species generally declined as canopy tree retention and basal area decreased, although some mature‐forest species had similar densities among unharvested and partially harvested (e.g., first‐entry shelterwood) stands, and others had their highest densities in shelterwoods. We conducted a previous meta‐analysis study, which showed most shrubland bird species in the region increase with harvest intensity, but some shrubland species had similar densities in clearcuts and shelterwoods. Given the contrasting effects of harvest intensity on the two avian guilds, we used Partners‐in‐Flight conservation values to generate objective community‐wide conservation indices relative to postharvest tree retention. Clearcuts and shelterwoods typically had the highest conservation values, and unharvested and lightly thinned stands (70%–100% tree retention) had the lowest conservation scores. Many declining shrubland bird species of conservation concern are abundant in low‐retention stands, thus elevating the conservation value of these stands. Additionally, high conservation values of harvested stands with 40%–70% tree retention represent the presence of both shrubland and mature‐forest species; the latter are potentially responding to enhanced understory structure needed for avian nesting or foraging. In contrast, contemporary closed‐canopy forests in eastern North America are generally characterized by low structural diversity and are mid‐seral stands due to historical patterns of land use and tree harvesting. Although avian community conservation values were lowest in high‐retention stands and many other threatened, non‐avian taxa depend on open‐canopy, managed forests, managers should note that late‐seral, unharvested stands can provide important habitat for old‐growth‐dependent taxa and any intensive forestry should also take into account other factors. Considering the growing interest in using postharvest retention of canopy trees to meet ecological objectives, our novel synthesis can assist managers in assessing species‐specific and community‐wide avian responses to tree retention levels along the entire gradient of canopy treatments.

Comments on “Privacy-Enhanced Federated Learning Against Poisoning Adversaries”

Liu et al. (2021) recently proposed a privacy-enhanced framework named PEFL to efficiently detect poisoning behaviours in Federated Learning (FL) using homomorphic encryption. In this article, we show that PEFL does not preserve privacy. In particular, we illustrate that PEFL reveals the entire gradient vector of all users in clear to one of the participating entities, thereby violating privacy. Furthermore, we clearly show that an immediate fix for this issue is still insufficient to achieve privacy by pointing out multiple flaws in the proposed system.

Synergistic effects of climate and salinity on radial growth of Excoecaria agallocha L. in the Sundarbans world heritage mangrove ecosystem

The Sundarbans World Heritage ecosystem provides valuable ecosystem goods and services to >7.5 million coastal people in South Asia. This sentinel mangrove ecosystem is threatened by historical anthropogenic disturbances, salinity intrusion and long-term environmental changes including sea level rise. Understanding which factors regulate mangroves’ growth is crucial for taking effective management decisions under global changes. However, a paucity of long-term mangrove tree growth data has limited our ability to quantify and predict the impacts of global changes on mangrove ecosystems. Using long-term growth data archived from the stem discs, this study, therefore, aims to understand how climatic and habitat variables influence radial growth dynamics in Excoecaria agallocha, a hyperdominant mangrove species in the Bangladesh Sundarbans. We find E. agallocha forms a distinct tree-ring boundary characterized by a narrow (2–4 cells wide) band of radially flattened fibres. The crossdatable tree-rings enabled us to develop two ecological zone-specific (low and high saline zone) chronologies (1972–2020) covering the entire salinity stress gradient present in the Sundarbans. Our analyses show: (I) radial growth rate in E. agallocha is significantly lower in the high saline zone, (II) monsoonal precipitation enhances radial growth, (III) large-scale climate drivers, such as sea surface temperature (SST) of the equatorial Pacific and the Indian Ocean, and the El Niño-Southern Oscillation (ENSO) influence tree growth through modifying the local precipitation in varying seasons, and (IV) local habitat variables, such as soil salinity and siltation have combined effects on radial growth of trees although soil salinity exhibits stronger negative effect. Our results highlight the importance of integrating both climate and local habitat variables with tree-ring data for a better understanding of tree growth dynamics under changing environment.

Metatranscriptomics reveals contrasting effects of elevation on the activity of bacteria and bacterial viruses in soil.

Soil microbial diversity affects ecosystem functioning and global biogeochemical cycles. Soil bacterial communities catalyse a diversity of biogeochemical reactions and have thus sparked considerable scientific interest. One driver of bacterial community dynamics in natural ecosystems has so far been largely neglected: the predator-prey interactions between bacterial viruses (bacteriophages) and bacteria. To generate ground level knowledge on environmental drivers of these particular predator-prey dynamics, we propose an activity-based ecological framework to simultaneous capture community dynamics of bacteria and bacteriophages in soils. An ecological framework and specifically the analyses of community dynamics across latitudinal and elevational gradients have been widely used in ecology to understand community-wide responses of innumerable taxa to environmental change, in particular to climate. Here, we tested the hypothesis that the activity of bacteria and bacteriophages codeclines across an elevational gradient. We used metatranscriptomics to investigate bacterial and bacteriophage activity patterns at five sites across 400 elevational metres in the Swiss Alps in 2015 and 2017. We found that metabolic activity (transcription levels) of bacteria declined significantly with increasing elevation, but activity of bacteriophages did not. We showed that bacteriophages are consistently active in soil along the entire gradient, making bacteriophage activity patterns divergent from that of their putative bacterial prey. Future efforts will be necessary to link the environment-activity relationship to predator-prey dynamics, and to understand the magnitude of viral contributions to carbon, nitrogen and phosphorus cycling when infection causes bacterial cell death, a process that may represent an overlooked component of soil biogeochemical cycles.

High species richness and turnover of vascular epiphytes is associated with water availability along the elevation gradient of Volcán Maderas, Nicaragua.

Research that has been conducted documenting species richness patterns on tropical mountains has resulted in conflicting observations: monotonic declines with increasing elevation, monotonic increases with increasing elevation, and a mid-elevation "bulge." Currently, it is unclear if these differences are due to environmental differences among study areas, the taxonomic groups or ecological groups (e.g., growth form) sampled, or the scale of study along elevation gradients. Because of the difficulty in sampling and identifying canopy-dwelling plants, the number of inventories quantifying tropical epiphytes is relatively limited and recent. In this study, we provide a detailed qualitative and quantitative assessment of the vascular epiphyte flora and its spatial distribution on Volcán Maderas, Isla de Ometepe, Nicaragua, including weather and environmental measurements along the entire elevation gradient of the volcano. We sampled epiphytes in five distinct forest types associated with increasing elevation as follows: dry forest, humid forest, wet forest, cloud forest, and elfin forest. Five weather stations were placed along the elevation gradient for us to relate observed patterns to environmental conditions. A mid-elevation peak in species richness was detected for all vascular epiphytes at approximately 1000 m in elevation (cloud forest), yet epiphyte abundance increased with increasing elevation. In total we identified 206 taxa of vascular epiphytes belonging to 26 families and 73 genera. The most species-rich family was the Orchidaceae with 55 species for the entire elevation gradient, followed by Bromeliaceae (29 species), Araceae (23), Polypodiaceae (25), Dryopteridaceae (16), and Piperaceae (11), with all other families represented by fewer than 10 species each. We found that richness patterns differ phylogenetically across epiphyte groups, possibly due to different adaptive strategies, and species for the most part appear to be narrowly distributed within specific habitat zones along the elevation gradient. Variables associated with moisture, precipitation, humidity, mist, or cloud cover are key to understanding the observed patterns.

High spatial heterogeneity and low connectivity of bacterial communities along a Mediterranean subterranean estuary.

Subterranean estuaries are biogeochemically active coastal sites resulting from the underground mixing of fresh aquifer groundwater and seawater. In these systems, microbial activity can largely transform the chemical elements that may reach the sea through submarine groundwater discharge (SGD), but little is known about the microorganisms thriving in these land-sea transition zones. We present the first spatially-resolved characterization of the bacterial assemblages along a coastal aquifer in the NW Mediterranean, considering the entire subsurface salinity gradient. Combining bulk heterotrophic activity measurements, flow cytometry, microscopy and 16S rRNA gene sequencing we find large variations in prokaryotic abundances, cell size, activity and diversity at both the horizontal and vertical scales that reflect the pronounced physicochemical gradients. The parts of the transect most influenced by freshwater were characterized by smaller cells and lower prokaryotic abundances and heterotrophic production, but some activity hotspots were found at deep low-oxygen saline groundwater sites enriched in nitrite and ammonium. Diverse, heterogeneous and highly endemic communities dominated by Proteobacteria, Patescibacteria, Desulfobacterota and Bacteroidota were observed throughout the aquifer, pointing to clearly differentiated prokaryotic niches across these transition zones and little microbial connectivity between groundwater and Mediterranean seawater habitats. Finally, experimental manipulations unveiled large increases in community heterotrophic activity driven by fast growth of some rare and site-specific groundwater Proteobacteria. Our results indicate that prokaryotic communities within subterranean estuaries are highly heterogeneous in terms of biomass, activity and diversity, suggesting that their role in transforming nutrients will also vary spatially within these terrestrial-marine transition zones.

Multivariate drought stress response of Norway spruce, silver fir and Douglas fir along elevational gradients in Southwestern Germany

The conifer tree species Norway spruce (Picea abies), silver fir (Abies alba) and Douglas fir (Pseudotsuga menziesii) are important elements in tree species composition and forest management of Central European forests, but their potential to thrive under anticipated climatic changes is still debated controversially. This study contributes a multivariate analysis of resilience components based on increment cores sampled at breast height of Norway spruce, silver fir and Douglas fir trees growing along elevational gradients in Southwestern Germany. We aimed to gain novel insights into the species-specific and elevational response of tree growth and wood density variables during the extreme drought events of the years 2003 and 2018. Our results for Norway spruce corroborate projections of its ongoing decline during climate change as the reductions of wood density and biomass production indicated high drought sensitivity at all elevations. Moreover, resilience indices of mean tree-ring density, maximum latewood density, tree-ring width and biomass production were even lower after the drought of 2018 compared to the previous drought of 2003. Silver fir, a potential substitute tree species for Norway spruce, showed unexpected results with resistance and resilience indices being significantly lower in 2018 compared to 2003 indicating that silver fir might be more vulnerable to drought than previously expected, especially at low elevations. In contrast, the superior growth rates and higher levels of drought tolerance of Douglas fir were especially pronounced during the drought of 2018 and visible across the entire elevational gradient, even though high coning intensity was present for all investigated tree species as a possible confounding factor to exacerbate the drought stress effects in the study region.

Effects of geometric configurations on the thermal-mechanical properties of parabolic trough receivers based on coupled optical-thermal-stress model

An optical-thermal-stress coupled analysis model of the Parabolic Trough Receiver (PTR) was built based on the Monte Carlo Ray Tracing method and Computational Fluid Dynamics. The temperature field and stress field of the PTR were studied by numerical simulation, and the absorber deformation and the Kovar ring failure were analyzed. Furthermore, the effects of the aperture width (W) and focal length (f) across the entire receiver temperature gradient and thermal stress field were studied. The results showed that the effect of width and focal length on the temperature field was mainly reflected in the change in the high-temperature distribution of the absorber. The maximum collector efficiency were 81.02% and 70.4% when W = 13 m and f = 1.84 m, respectively. The maximum deformation on the absorber reached 17.85 mm at W = 7 m. High deformation and high Von Mises stress were maintained with f from 3.5 m to 5.5 m. The trends of maximum temperature difference and average temperature on bellows, Kovar ring and glass tube were similar. The results also showed that width and focal length mainly affected the axial stress on Kovar rings and bellows.

Cerrado deforestation threatens regional climate and water availability for agriculture and ecosystems.

The Brazilian Cerrado is one of the most biodiverse savannas in the world, yet 46% of its original cover has been cleared to make way for crops and pastures. These extensive land-use transitions (LUTs) are expected to influence regional climate by reducing evapotranspiration (ET), increasing land surface temperature (LST), and ultimately reducing precipitation. Here, we quantify the impacts of LUTs on ET and LST in the Cerrado by combining MODIS satellite data with annual land use and land cover maps from 2006 to 2019. We performed regression analyses to quantify the effects of six common LUTs on ET and LST across the entire gradient of Cerrado landscapes. Results indicate that clearing forests for cropland or pasture increased average LST by ~3.5°C and reduced mean annual ET by 44% and 39%, respectively. Transitions from woody savannas to cropland or pasture increased average LST by 1.9°C and reduced mean annual ET by 27% and 21%, respectively. Converting native grasslands to cropland or pasture increased average LST by 0.9 and 0.6°C, respectively. Conversely, grassland-to-pasture transitions increased mean annual ET by 15%. To date, land changes have caused a 10% reduction in water recycled to the atmosphere annually and a 0.9°C increase in average LST across the biome, compared to the historic baseline under native vegetation. Global climate changes from increased atmospheric greenhouse gas concentrations will only exacerbate these effects. Considering potential future scenarios, we found that abandoning deforestation control policies or allowing legal deforestation to continue (at least 28.4Mha) would further reduce yearly ET (by -9% and -3%, respectively) and increase average LST (by +0.7 and +0.3°C, respectively) by 2050. In contrast, policies encouraging zero deforestation and restoration of the 5.2Mha of illegally deforested areas would partially offset the warming and drying impacts of land-use change.

Flooding and planting density shape forests in an experimental Everglades landscape: Lessons for forest restoration

AbstractTree islands, a prominent feature of wetland landscapes worldwide, are patches of forest scattered throughout a matrix of herbaceous marsh. In the Florida Everglades, their development over millennia as elevated, relatively well‐drained features above the wetland surface has made them cultural centers for indigenous people and refugia for a rich assortment of plants and animals. However, since the early years of the twentieth century, the number and area of tree islands have been roughly halved in Everglades National Park and Water Conservation Areas due to scarce or excessive water levels, leading to fires or persistent flooding, respectively. This loss has prompted a need for tree island rehabilitation or reconstruction within the ongoing state–federal partnership to bring about Everglades restoration. In this paper, we present results of a field‐scale experiment that examined the effects of flooding, planting density, and the size and proximity of neighbors on the performance of native tree species on constructed tree islands. Hypotheses derived using the stress‐gradient hypothesis as a framework were tested at the neighborhood level. Flooding reduced survival and mean tree size 7–8 years after initial planting, while planting seedlings at spacings as close as 1 m apart resulted in higher total biomass, with no significant cost in tree survival. Flood‐tolerant species increased in relative abundance during the study period along the entire hydrologic gradient, while flood‐intolerant species were able to survive only at higher elevations. Crowding effects within neighborhoods varied across the flooding gradient. Survival increased or remained stable as neighbor effects increased in high‐flooding zones, while declining sharply as crowding increased under low‐flooding conditions. Similar results were obtained for the growth of flood‐tolerant species under close spacing, with most showing an increment in growth where flooding was high. These data suggest that tree island restoration can benefit from targeted mixed‐species plantings at variable densities, as the compositional and structural heterogeneity promoted by these measures may increase adaptability and resilience to future uncertainties.

Spatial Distribution of Cladocera in a Stratified Palaearctic Lake

The spatial distribution of 39 species of Chydoridae, representing seven families, was examined in a stratified Palaearctic lake in Poland (Lake Piaseczno). Thirty-one of the species living in that lake were found to exist exclusively in the littoral zone. No species were found exclusively in the pelagic zone; in this zone, eight species were identified, but all of these were also quite abundant in the littoral zone. Almost all species of Chydoridae and all species of Macrothricidae were found only in littoral, whereas Daphnidae and Sididae families comprised species either restricted to the littoral or occurring in both pelagic and littoral zones. Two Bosminidae species, in turn, displayed quite a consistent distribution in both biotic zones, but differed in their habitat preferences. On the other hand, species of Polyphemidae and Leptodoridae exhibited littoral and littoral-pelagic distributions, respectively. Few species occurred in one habitat only. Most species, despite showing clear preferences for a distinct habitat (or habitats), were also present at lower densities throughout the littoral zone, or the whole lake, in the case of limnetic species. Archetype analysis showed that cladocerans were distributed along the entire gradient of macrophyte characteristics and habitat depth. Among Chydoridae, which displayed the strongest attachment to habitats overgrown by macrophytes, few species showed above 50% similarity to the archetype representing species living among submerged macrophytes with the highest plant per volume infested. Furthermore, many littoral species, including these of the Macrothricidae family, P. pediculus and S. mucronata, avoided staying in habitats with particularly complicated spatial architecture. Regarding their distribution in relation to depth, cladocerans could be grouped into species found in the whole littoral zone, species settling in relatively shallow parts of the littoral zone, species found mainly in habitats 3–6 m deep and species settling throughout the lake. Archetype analysis showed negligible similarity between cladocerans and the archetype representing species living in macrophyte-free habitats in the deepest parts of the lake. The study provides quantitative support showing that cladocerans display a distribution threshold at one time in one lake. Although this group of aquatic invertebrates is widely suspected of being ecologically flexible and tolerant to environmental gradients, individual species showed high spatial segregation according to depth and habitat architecture.

Urbanization causes biotic homogenization of woodland bird communities at multiple spatial scales.

Urbanization is a major contributor to biodiversity declines. However, studies assessing effects of urban landscapes per se (i.e., disentangled from focal habitat effects) on biodiversity across spatial scales are lacking. Understanding such scale-dependent effects is fundamental to preserve habitats along an urbanization gradient in a way that maximizes overall biodiversity. We investigated the impact of landscape urbanization on communities of woodland-breeding bird species in individual (local scale) and across multiple (regional scale) cities, while controlling for the quality of sampled habitats (woodlands). We conducted bird point counts and habitat quality mapping of trees, dead wood, and shrubs in 459 woodlands along an urban to rural urbanization gradient in 32 cities in Sweden. Responses to urbanization were measured as local and regional total diversity (γ), average site diversity (α), and diversity between sites (β). We also assessed effects on individual species and to what extent dissimilarities in species composition along the urbanization gradient were driven by species nestedness or turnover. We found that landscape urbanization had a negative impact on γ-, α-, and β-diversity irrespective of spatial scale, both regarding all woodland-breeding species and red-listed species. At the regional scale, dissimilarities in species composition between urbanization levels were due to nestedness, that is, species were lost with increased landscape urbanization without being replaced. In contrast, dissimilarities at the local scale were mostly due to species turnover. Because there was no difference in habitat quality among woodlands across the urbanization gradient, we conclude that landscape urbanization as such systematically causes poorer and more homogeneous bird communities in adjacent natural habitats. However, the high local turnover and the fact that several species benefited from urbanization demonstrates that natural habitats along the entire urbanization gradient are needed to maintain maximally diverse local bird communities.

Geochemical matrix differently affects the response of internal standards and target analytes for pesticide transformation products measured in groundwater samples

Electrospray ionization (ESI) is the most common technique in liquid chromatography coupled to tandem mass spectrometry (LC-MS-MS) allowing for sensitive detection of polar compounds with online water concentration. The technique is popular in groundwater monitoring programs and has permitted great progress in the detection and quantification of polar pesticide transformation products (TP) in recent years. However, ESI is also known to be prone to matrix effects. The common solution to this potential bias is the use of labelled internal standards. Unfortunately, these are not available for all target compounds, which leads to the linkage of target compounds to non-homologue internal standards with unknown consequences for quantification in variable geochemical settings. We investigated these matrix effects for polar TP with a molecular mass range of 225–350 Da and logDpH7 between −0.27 and −1.7 as well as for parent compounds with logDpH3 between 0.84 and 3.22. The acquired internal standards were tested on a gradient of DOC, anions, conductivity and inorganic carbon with a set of ten carefully chosen groundwater samples. Internal standards that were measured in positive ionization mode proved to be insensitive to geochemical variations while those that were measured in negative ionization mode showed reduced response with increasing anion concentration. All pairs of internal standards and target analytes were investigated for deviating matrix effects using standard addition experiments. Positive ionization compounds and target compounds with deuterated homologues showed little deviation while non-homologue pairs in negative mode proved to be strongly biased. Although bias was up to factor five for some compounds it was remarkably stable over the entire gradient studied, suggesting an identical suppression mode at varying matrix levels for different compounds. We advocate the conduct of standard addition experiments if homologue internal standards are not available.

Low diversity of fishes in high elevation Afrotromontane streams renders them unsuitable for biomonitoring

AbstractMost of the rivers in the Afrotropics emerge from forested uplands that are prime for human activities, including crop farming, grazing and settlement. However, streams draining these areas have a low diversity of fishes, which limits their use as indicators of water quality and ecological status. Here, we developed macroinvertebrate‐ and fish‐based indices of biotic integrity and evaluated their responses to human activities in the Sondu‐Miriu River, Kenya. Overall, water quality declined downstream because of the cumulative effects of human activities. The upper reaches had poor fish diversity with at most three species, but macroinvertebrate communities were diverse on the entire gradient of the river. Metrics that have been used to develop indices of biotic integrity in the Lake Victoria basin were selected and evaluated for responsiveness to various forms of human disturbance along the river. The poor diversity of fishes in the upper reaches limited the number of metrics that could be developed and evaluated. The fish index was only successfully applied in the middle and lower reaches where fish diversity was high. However, macroinvertebrates were diverse and sensitive to human activities on the entire gradient of the river. This study shows that for biomonitoring, macroinvertebrate communities offer a better alternative to fishes in high elevation Afromontane streams that harbour poor fish assemblages.

Competition rather than facilitation affects plant performance across an abiotic stress gradient in a restored California salt marsh

The Stress Gradient Hypothesis predicts facilitation will become more important than competition where abiotic stress is high, and the framework successfully predicts positive interactions between species in many systems. Fewer studies have focused on intraspecific facilitation, and to our knowledge none examine intraspecific interactions in Pacific Coast salt marshes of North America. We used two species that tend to occur in large, monospecific patches to test for intraspecific facilitation in a restored California marsh, where tides and evaporation during summer create moisture and salinity gradients across elevation. We tested performance of Frankenia salina or Jaumea carnosa in restoration plots using two treatments: clustered plantings to promote facilitation, and widely spaced plantings to limit interaction between individuals. We characterized the soil water potential gradient and measured plant survival, cover, physiology, and susceptibility to herbivory across elevation and planting treatments. Soil water potential declined sharply with elevation, suggesting plant stress should be higher upslope. However, tissue water potential was unaffected by elevation, and survival was high—suggesting growing conditions remained benign. A seawater addition treatment did not alter the response of plants or plant interactions to the abiotic gradient. At 19 months, intraspecific competition prevailed across the entire elevation gradient for both species, with less transplant cover in clustered plantings. However, clustered Frankenia fared better during a transient period of heavy rabbit herbivory. Aside from this temporary benefit, clustering did not reduce stress and strongly suppressed growth—suggesting that restoration designs for the high marsh should minimize competition.