Abstract We examined Holocene benthic foraminiferal biofacies, % planktonic foraminifera, and lithofacies changes from New England mud patch cores and present a relative sea-level (RSL) record to evaluate evolution of these rapidly deposited (30–79 cm/kyr) muds. Sandy lower Holocene sections are dominated by Bulimina marginata. The mud patch developed from 11–9 ka as RSL rise slowed from 10 to 7 mm/yr; mud deposition began when the cores (69 to 91 m modern) were inundated below storm wave base. An Elphidium-B. marginata fauna developed at ca. 7–6 ka as RSL rise slowed from approximately 7 to 2 mm/yr. A Globobulimina fauna developed at 3 ka as RSL rise slowed to 1 mm/yr, reflecting lower O2 conditions. Single specimen δ18O analyses of Globobulimina show ∼1‰ variations over the past 3 kyr, reflecting a shelf bottom water seasonal cycle of 4–5°C, and a temperature minimum during the Little Ice Age with warming since.