Wastewater-based epidemiology can monitor population-level infection, provide early warnings about disease outbreaks, and help control disease spread at the community level [1,2]. However, broad-spectrum bacterial identification in wastewater presents outstanding challenges; notably, current culturing or fluorescence-based methods [3] to identify bacteria are unsuitable for real-time, high-throughput screening of diverse bacterial species, and may not work well in the complex wastewater matrix. Here, we harness electrokinetics and artificial intelligence (AI)-powered Raman spectroscopy as an innovative approach that promises the identification of a wide range of pathogenic bacteria in wastewater.First, we synthesize gold nanorods that can electrostatically bind to bacteria surfaces, allowing for surface-enhanced Raman spectroscopy (SERS) [4] from cell surfaces. We collect SERS from bacteria spiked into filter-sterilized wastewater, including Staphylococcus aureus, Staphylococcus epidermidis, and Escherichia coli, spanning concentrations from 109 cells/mL to 104 cells/mL. Spectral clustering analysis shows that bacterial signals become less distinguishable in wastewater as the concentrations decrease. To overcome this challenge, we incorporate electrokinetic effects into SERS by employing gold microelectrodes to apply electric fields, utilizing dielectrophoresis (DEP) [5] to rapidly displace and concentrate bacteria. The four types of bacteria responded to 5-100 kHz AC fields based on their different dielectric responses and sizes, and were enriched at the microelectrode within minutes. The enrichment of bacteria is directly visualized through optical and electron microscopy, resulting in up to tenfold increases in Raman signal intensities under electrical fields at bacterial concentrations down to 104 cells/mL. Such enhancement may enable the detection sensitivity to reach environmentally relevant concentrations. Importantly, mixtures of bacteria are now distinguishable from SERS under DEP effects. Finally, employing random forest and convolutional neural network models [6], we identify biologically relevant Raman fingerprint peaks characterizing proteins, nucleic acids, and lipids from bacteria surfaces, allowing for rapid identification of bacteria species in wastewater. We also discuss integrating our method with microfluidic devices to monitor complex wastewater samples. Our method can enable generalized pathogen detection and molecular recognition in complex liquid samples, such as wastewater, blood, and seawater.[1] Hellmér, et al. Applied and environmental microbiology. (2014).[2] Keshaviah, et al. The Lancet Global Health. (2023).[3] Jahn, et al. Nature Microbiology. (2022).[4] Tadesse, et al., Nano Lett. (2020).[5] Pethig. John Wiley & Sons (2010).[6] Ho, et al., Nat. Comm. (2019).
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