AbstractIn small‐scale basins, where laser levelling is not possible, the process of land surface levelling is not accurate. Under such conditions, the land surface microtopography can alter the infiltration parameter and irrigation design criteria. This study investigated the effect of microtopography on basin irrigation infiltration parameters. Three experimental basins with different dimensions were selected and irrigated in three replicates. An infiltration calibration method was presented by assuming homogenous slope conditions, which use the zero‐inertia model. This method was modified by considering heterogeneous slope conditions. By assuming a homogenous slope condition, the results showed that the differences between the observed and estimated parameters, including advance time, recession time and surface storage volume of water, were statistically significant at the 5% level. By considering heterogonous slope conditions, the estimated infiltration values were more accurate than those under homogenous slope conditions. The average volume balance error was 0.19 (assuming homogenous slope conditions); however, by considering heterogeneous slope conditions, this parameter was 0.081. These results show the necessity of considering microtopography conditions for calibrating infiltration equation parameters of basin irrigation.