Emerging infectious diseases pose a significant threat to human and animal welfare. A high proportion of emerging and reemerging infectious diseases are zoonoses derived from wildlife [1]. Bats harbour more zoonotic viruses per species than rodents and are now recognised as a significant source of zoonotic agents [2]. Henipaviruses, coronaviruses, filoviruses, and the rabies-causing lyssaviruses have all been shown to be transmissible from bats to humans—often through an intermediate host—with fatal consequences (Figure 1). Despite the obvious risk bat viruses pose to human health, it must be acknowledged that most outbreaks of bat-borne zoonotic diseases are a consequence of human activities. From an ecological perspective, bats are a remarkable and ecologically important group with many unique biological features. Figure 1 Bats are diverse, as are the viruses that infect them.