Ectomycorrhizal Fungal Diversity Research Articles

The influence of tree genus, phylogeny, and richness on the specificity, rarity, and diversity of ectomycorrhizal fungi.

Partner specificity is a well-documented phenomenon in biotic interactions, yet the factors that determine specificity in plant-fungal associations remain largely unknown. By utilizing composite soil samples, we identified the predictors that drive partner specificity in both plants and fungi, with a particular focus on ectomycorrhizal associations. Fungal guilds exhibited significant differences in overall partner preference and avoidance, richness, and specificity to specific tree genera. The highest level of specificity was observed in root endophytic and ectomycorrhizal associations, while the lowest was found in arbuscular mycorrhizal associations. The majority of ectomycorrhizal fungal species showed a preference for one of their partner trees, primarily at the plant genus level. Specialist ectomycorrhizal fungi were dominant in belowground communities in terms of species richness and relative abundance. Moreover, all tree genera (and occasionally species) demonstrated a preference for certain fungal groups. Partner specificity was not related to the rarity of fungi or plants or environmental conditions, except for soil pH. Depending on the partner tree genus, specific fungi became more prevalent and relatively more abundant with increasing stand age, tree dominance, and soil pH conditions optimal for the partner tree genus. The richness of partner tree species and increased evenness of ectomycorrhizal fungi in multi-host communities enhanced the species richness of ectomycorrhizal fungi. However, it was primarily the partner-generalist fungi that contributed to the high diversity of ectomycorrhizal fungi in mixed forests.

Ectomycorrhizal fungal communities in natural and urban ecosystems: Quercus humboldtii as a study case in the tropical Andes

Worldwide urban landscapes are expanding because of the growing human population. Urban ecosystems serve as habitats to highly diverse communities. However, studies focusing on the diversity and structure of ectomycorrhizal communities are uncommon in this habitat. In Colombia, Quercus humboldtii Bonpl. is an ectomycorrhizal tree thriving in tropical montane forests hosting a high diversity of ectomycorrhizal fungi. Q. humboldtii is planted as an urban tree in Bogotá (Colombia). We studied how root-associated fungal communities of this tree change between natural and urban areas. Using Illumina sequencing, we amplified the ITS1 region and analyzed the resulting data using both OTUs and Amplicon Sequence Variants (ASVs) bioinformatics pipelines. The results obtained using both pipelines showed no substantial differences between OTUs and ASVs for the community patterns of root-associated fungi, and only differences in species richness were observed. We found no significant differences in the species richness between urban and rural sites based on Fisher’s alpha or species-accumulation curves. However, we found significant differences in the community composition of fungi present in the roots of rural and urban trees with rural communities being dominated by Russula and Lactarius and urban communities by Scleroderma, Hydnangium, and Trechispora, suggesting a high impact of urban disturbances on ectomycorrhizal fungal communities. Our results highlight the importance of urban trees as reservoirs of fungal diversity and the potential impact of urban conditions on favoring fungal species adapted to more disturbed ecosystems.

Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession

Ectomycorrhizal fungi (EMF) can form symbiotic relationships with plants, aiding in plant growth by providing access to nutrients and defense against phytopathogenic fungi. In this context, factors such as plant assemblages and soil properties can impact the interaction between EMF and phytopathogenic fungi in forest soil. However, there is little understanding of how these fungal interactions evolve as forests move through succession stages. In this study, we used high-throughput sequencing to investigate fungal communities in young, intermediate, and old subtropical forests. At the genus level, EMF communities were dominated by Sebacina, Russula, and Lactarius, while Mycena was the most abundant genus in pathogenic fungal communities. The relative abundances of EMF and phytopathogenic fungi in different stages showed no significant difference with the regulation of different factors. We discovered that interactions between phytopathogenic fungi and EMF maintained a dynamic balance under the influence of the differences in soil quality attributed to each forest successional stage. The community composition of phytopathogenic fungi is one of the strong drivers in shaping EMF communities over successions. In addition, the EMF diversity was significantly related to plant diversity, and these relationships varied among successional stages. Despite the regulation of various factors, the positive relationship between the diversity of phytopathogenic fungi and EMF remained unchanged. However, there is no significant difference in the ratio of the abundance of EMF and phytopathogenic fungi over the course of successions. These results will advance our understanding of the biodiversity–ecosystem functioning during forest succession.Key points•Community composition of both EMF and phytopathogenic fungi changed significantly over forest succession.•Phytopathogenic fungi is a key driver in shaping EMF community.•The effect of plant Shannon’s diversity on EMF communities changed during the forest aging process.

Soil microbiome feedbacks during disturbance-driven forest ecosystem conversion.

Disturbances cause rapid changes to forests, with different disturbance types and severities creating unique ecosystem trajectories that can impact the underlying soil microbiome. Pile burning-the combustion of logging residue on the forest floor-is a common fuel reduction practice that can have impacts on forest soils analogous to those following high-severity wildfire. Further, pile burning following clear-cut harvesting can create persistent openings dominated by nonwoody plants surrounded by dense regenerating conifer forest. A paired 60-year chronosequence of burn scar openings and surrounding regenerating forest after clear-cut harvesting provides a unique opportunity to assess whether belowground microbial processes mirror aboveground vegetation during disturbance-induced ecosystem shifts. Soil ectomycorrhizal fungal diversity was reduced the first decade after pile burning, which could explain poor tree seedling establishment and subsequent persistence of herbaceous species within the openings. Fine-scale changes in the soil microbiome mirrored aboveground shifts in vegetation, with short-term changes to microbial carbon cycling functions resembling a postfire microbiome (e.g. enrichment of aromatic degradation genes) and respiration in burn scars decoupled from substrate quantity and quality. Broadly, however, soil microbiome composition and function within burn scar soils converged with that of the surrounding regenerating forest six decades after the disturbances, indicating potential microbial resilience that was disconnected from aboveground vegetation shifts. This work begins to unravel the belowground microbial processes that underlie disturbance-induced ecosystem changes, which are increasing in frequency tied to climate change.

Exploration and Identification of Ectomycorrhizal Fungi at IPB University Campus Forest

The exploration of ectomycorrhizal fungi diversity around the campus could provide insights into the presence and distribution of these symbiotic fungi in the area. This study aimed to observe, identify, and provide information regarding ectomycorrhizal fungi diversity in the IPB University Campus Forest. The sampling sites represent various tree species including forests, parks, and green spaces. The exploration was done using opportunistic sampling method. The obtained basidiomata were examined for macromorphological and micromorphological examination to identify the ectomycorrhizal fungi. The identification results based on the morphological characteristics confirmed our specimens as Inocybe cf. squarrosolutea (Corner & E. Horak) Garrido and Suillus bovinus (L.) Roussel. The Inocybe was characterized by having small to medium-sized, pileus squamules, dry surface, light brown to yellowish cap, lamellae crowded, cylindrical or attenuated stipe towards the apex, clavate basidia, and hemispheric knobs basidiospores. The Suillus was distinguished by having a cap that is convex in shape with a slightly brownish yellow color and the surface texture of the cap is smooth, lamella in the form of pores that are quite large and angular, brownish yellow in color, yellow tubular stipe, clavate basidia, and oval spores. These two macrofungi are new records in the sampling area and I. cf. squarrosolutea could be the new information for Indonesia. Our finding provides valuable information for ecological studies and contributes to the additional data on Indonesian ectomycorrhizal fungi diversity.

The Ectomycorrhizal Fungi and Soil Bacterial Communities of the Five Typical Tree Species in the Junzifeng National Nature Reserve, Southeast China.

To explore the contribution of microorganisms to forest ecosystem function, we studied the ectomycorrhizal (ECM) fungal and soil bacterial community of the five typical tree species (Pinus massoniana, PM; Castanopsis carlesii, CC; Castanopsis eyrei, CE; Castanopsis fargesii, CF; and Keteleeria cyclolepis, KC) at the Junzifeng National Nature Reserve. The results indicated that the ECM fungal and soil bacterial diversity of CC and CF was similar, and the diversity rates of CC and CF were higher than those of PM, CE, and KC. Cenococcum geophilum and unclassified_Cortinariaceae II were the most prevalent occurring ECM fungi species in the five typical tree species, followed by unclassified_Cortinariaceae I and Lactarius atrofuscus. In bacteria, the dominant bacterial genera were Acidothermus, Bradyrhizobium, Acidibacter, Candidatus_Solibacter, Candidatus_Koribacter, Roseiarcus, and Bryobacter. EMF fungi and soil bacteria were correlated with edaphic factors, especially the soil pH, TP, and TK, caused by stand development. The results show that the community characteristics of ECM fungi and bacteria in the typical tree species of the Junzifeng National Nature Reserve reflect the critical role of soil microorganisms in stabilizing forest ecosystems.

Using high-throughput sequencing to investigate summer truffle consumption by chipmunks in relation to retention forestry

Intensive management of forests for wood modifies forest biodiversity, affecting the composition of plant and animal communities as well as microorganisms such as bacteria and fungi. Ectomycorrhizal fungi (EMF) form mutualistic relationships with trees, but there is evidence that the abundance and diversity of EMF declines under intensive forest management. The dispersal of some EMF, including that of truffles, depends on small mammals consuming their fruiting bodies and dispersing spores through feces. To better understand provisioning of this ecosystem service within intensively managed forests, we applied high-throughput, DNA amplicon sequencing to scat collected from Townsend’s chipmunks (Neotamias townsendii) inhabiting retention patches in recently clearcut-conifer stands. Across two summers, we collected 165 chipmunk scat samples from 43 clearcut-conifer stands in the Pacific Northwest (USA). We identified 81 truffle species representing 16 families, which included many rare and uncommon taxa. Retention patch sizes varied from 9 to 222 trees (0.002–0.83 ha) but we did not detect an effect of retention patch size on the richness of truffles in chipmunk scat samples. However, truffle richness was slightly higher in scat samples collected from chipmunks in retention patches compared to individuals sampled in adjacent clearcuts. Furthermore, the abundance of certain truffle species in chipmunk scat varied in relation to retention patch size and location (riparian or upland), suggesting retention forestry practices may influence truffle community composition. Throughout the sampling season, we detected a 44% decline in truffle species richness and a significant reduction in abundance (i.e., sequence reads) for > 50% of common truffle taxa. Our application of high-throughput sequencing of scat effectively captured variation in truffle species consumption by chipmunks. Our results confirm that common small mammals play an important role in the dispersal of EMF across recently logged forests (<8 years since harvest) and indicate that retaining relatively small (∼10 tree) green-tree patches may promote truffle dispersal by providing small mammal habitat.

First report of the ectomycorrhizal fungal community associated with two herbaceous plants in Inner Mongolia, China.

Ectomycorrhizal (EM) fungi play a vital role in ensuring plant health, plant diversity, and ecosystem function. However, the study on fungal diversity and community assembly of EM fungi associated with herbaceous plants remains poorly understood. Thus, in our study, Carex pediformis and Polygonum divaricatum in the subalpine meadow of central Inner Mongolia, China were selected for exploring EM fungal diversity and community assembly mechanisms by using llumina MiSeq sequencing of the fungal internal transcribed spacer 2 region (ITS2). We evaluated the impact of soil, climatic, and spatial variables on EM fungal diversity and community turnover. Deterministic vs. stochastic processes for EM fungal community assembly were quantified using β-Nearest taxon index scores. The results showed that a total of 70 EM fungal OTUs belonging to 21 lineages were identified, of which Tomentella-Thelephora, Helotiales1, Tricholoma, Inocybe, Wilcoxina were the most dominant EM fungal lineages. EM fungal communities were significantly different between the two herbaceous plants and among the two sampling sites, and this difference was mainly influenced by soil organic matter (OM) content and mean annual precipitation (MAP). The neutral community model (NCM) explained 45.7% of the variations in EM fungi community assembly. A total of 99.27% of the β-Nearest Taxa Index (βNTI) value was between -2 and 2. These results suggest that the dominant role of stochastic processes in shaping EM fungal community assembly. In addition, RCbray values showed that ecological drift in stochastic processes dominantly determined community assembly of EM fungi. Overall, our study shed light on the EM fungal diversity and community assembly associated with herbaceous plants in the subalpine region of central Inner Mongolia for the first time, which provided a better understanding of the role of herbaceous EM fungi.

Ectomycorrhizal diversity, taxon-specific traits and root N uptake in temperate beech forests.

Roots of forest trees are colonized by a diverse spectrum of ectomycorrhizal (EM) fungal species differing in their nitrogen (N) acquisition abilities. Here, we hypothesized that root N gain is the result of EM fungal diversity or related to taxon-specific traits for N uptake. To test our hypotheses, we traced 15 N enrichment in fine roots, coarse roots and taxon-specific ectomycorrhizas in temperate beech forests in two regions and three seasons, feeding 1 mM NH4 NO3 labelled with either 15 NH4 + or 15 NO3 - . We morphotyped > 45 000 vital root tips and identified 51 of 53 detected EM species by sequencing. EM root tips exhibited strong, fungal taxon-specific variation in 15 N enrichment with higher NH4 + than NO3 - enrichment. The translocation of N into the upper parts of the root system increased with increasing EM fungal diversity. Across the growth season, influential EM species predicting root N gain were not identified, probably due to high temporal dynamics of the species composition of EM assemblages. Our results support that root N acquisition is related to EM fungal community-level traits and highlight the importance of EM diversity for tree N nutrition.

Soil amendments impact root‐associated fungal communities of balsam poplar on a phosphogypsum reclamation site

During reclamation organisms like fungi directly interact at the soil–plant interface and can potentially impact plant growth, health, and overall revegetation success. Therefore, a study was conducted to determine how topsoil amendments (mycorrhizae, biochar, compost, manure) influence root‐associated fungal communities and growth of fast growing Populus balsamifera trees on a phosphogypsum (PG) reclamation site in Alberta, Canada. Tree height, diameter, biomass, and diversity of Ascomycota and Basidiomycota were assessed using Illumina MiSeq sequencing targeting the fungal internal transcribed spacer region 1 (ITS1) and ITS2. Topsoil amendments and root location (topsoil vs. PG within a treatment), greatly affected the root fungal community. Basidiomycota preferentially grew in PG, and had a high treatment specific root fungal community with highest diversity of ectomycorrhizal fungi and basidiomycete yeast in biochar PG and compost PG. Populus balsamifera roots were associated with a high diversity of Ascomycota, found equally in roots in topsoil and PG, with a trend towards higher diversity and abundance in PG. The core genus found across all samples was Fusarium, a potential plant pathogen. All topsoil amendments strongly reduced abundance of Fusarium and other Ascomycota in poplar roots. Biochar and compost reduced number and abundance of potential fungal pathogens and increased number of potential plant growth promoting Basidiomycota, indicating favorable growth conditions for P. balsamifera on a phosphygypsum reclamation site by application of these amendments. This study indicates compost and biochar can be effective soil amendments to support P. balsamifera establishment and growth on a PG reclamation site.

A comparison between the ectomycorrhizal fungal communities associated with the natural and plantation populations of Dipterocarpus alatus

Abstract. Kaewgrajang T, Yamato M, Polamart T, Sangwanit U. 2023. A comparison between the ectomycorrhizal fungal communities associated with the natural and plantation populations of Dipterocarpus alatus. Biodiversitas 24: 2088-2098. Dipterocarpus alatus Roxb. is a native tree species of Southeast Asian countries and one of the most economically important dipterocarp species. We investigated the ectomycorrhizal (ECM) fungi associated with D. alatus using molecular identifications on putative fruiting bodies and ECM roots collected from three natural forests and 10 D. alatus plantations. In this investigation, we aimed to report the ECM fungal communities of D. alatus in natural forests and plantations. Combining the results of fruiting bodies and ECM roots, 82 taxa belonging to 12 families were identified as ECM fungi. The ECM fungal community comprised many rare species and a few frequently found species. The Sebacina genus was found the most frequently in natural forests and plantations. The ECM fungal diversity was higher in plantations compared to natural forests. However, the frequently occurring ECM fungal taxa were not different between the natural forests and plantations. The result suggests that ECM fungal communities could be maintained in D. alatus plantations even if a reduction occurs in the natural population of dipterocarp forest.

Methods for identifying and measuring the diversity of ectomycorrhizal fungi

Abstract Mycorrhiza is a mutualistic symbiosis between some plant species and a diverse group of soil fungi. Mycorrhizal symbiosis is categorized into discrete types based on the structural differences and the taxonomic position of involved plants and fungi. The main types of mycorrhiza include arbuscular, ericoid, orchid, monotropoid and ectomycorrhiza, the latter being the main focus of this review. Identifying ectomycorrhizal fungi (EMF) is crucial for understanding the ecology and preservation of rare and endangered plants, fungi and habitats. Thus, since the discovery of ectomycorrhiza, new identification methods have been constantly developed. This review tracks the history of EMF identification methods, presents their limitations and aims to discern the frontier of the field. The early methods were based on the morphology and anatomy of EMF, which allowed ectomycorrhizae formed by different EMF to be distinguished. Recognizing the EMF species that formed them, however, was difficult. The introduction of molecular methods that analysed taxon-specific DNA barcodes was a breakthrough in EMF identification, and the internal transcribed spacer gene was adopted as a routine fungal barcoding sequence. Identifying EMF from randomly sampled roots by morphology or polymerase chain reaction (PCR)-based methods results in rare EMF taxa being missed and underreported. This is addressed by bulk sampling combined with environmental DNA metabarcoding methods, which, in turn, yield a lower resolution of taxonomic identification. Most EMF identification methods incorporate PCR reactions, which are biased against some groups of EMF; developing PCR-free molecular methods would constitute a significant advancement. As the traditional concept of species is challenging for fungi, studying EMF functional rather than taxonomic diversity appears to be promising.

Temporal dynamics of ectomycorrhizal fungal communities in Shorea siamensis forest fragments

Investigating the dynamics of ectomycorrhizal fungal (EMF) communities in seasonally dry tropical forests is essential for sustainable management and for understanding the resilience of this forest type in future climate change scenarios. EMF communities in secondary forest fragments with Shorea siamensis as a single host tree species in central Thailand were sampled seasonally for 2.5 y. Ten EMF taxa were identified from ectomycorrhizal morphotypes, with/tomentella-thelephora and/russula-lactarius as the dominant taxa. Seasonal differences in EMF diversity were not detected; the dominant morphotypes were present in both seasons and their abundance varied. Most EMF taxa exhibited wide environmental ranges and only a few taxa were correlated with soil moisture. Seasonal dynamics of ectomycorrhizal colonization was likely influenced by climatic factors and the phenology of host species. Together, these results suggested that climatic variation may have a long-term and subtle influence on the composition of ectomycorrhizal communities. • Ectomycorrhizal fungi in secondary Shorea siamensis forest fragments in Thailand. • Fungal taxa were common species found in deciduous dipterocarp forests. • Lack of seasonal differences in fungal community composition. • Root number and ectomycorrhizal colonization were influenced by precipitation. • Broad environmental ranges of ectomycorrhizal fungi imply resilience.

Stochastic processes dominate community assembly of ectomycorrhizal fungi associated with Picea crassifolia in the Helan Mountains, China.

Understanding the underlying mechanisms of microbial community assembly is a fundamental topic in microbial ecology. As an integral part of soil organisms, ectomycorrhizal (EM) fungi play vital roles in ecosystems. Picea crassifolia is an important pine species in the Helan Mountains in Inner Mongolia, China, with high ecological and economic values. However, studies of EM fungal diversity and mechanisms underlying community assembly on this pine species are limited. In this study, we investigated EM fungal communities associated with P. crassifolia from 45 root samples across three sites in the Helan Mountains using Illumina Miseq sequencing of the fungal rDNA ITS2 region. A total of 166 EM fungal OTUs belonging to 24 lineages were identified, of which Sebacina and Tomentella-Thelephora were the most dominant lineages. Ordination analysis revealed that EM fungal communities were significantly different among the three sites. Site/fungus preference analysis showed that some abundant EM fungal OTUs preferred specific sites. Ecological process analysis implied that dispersal limitation and ecological drift in stochastic processes dominantly determined the community assembly of EM fungi. Our study indicates that P. crassifolia harbors a high EM fungal diversity and highlights the important role of the stochastic process in driving community assembly of mutualistic fungi associated with a single plant species in a semi-arid forest in northwest China.

東京都多摩地域北西部の広葉樹二次林における外生菌根菌の種多様性評価

都市近郊二次林における外生菌根菌（以下，菌根菌）の種多様性を明らかにするために，東京都青梅市のコナラを優占樹種とする二次林において，ラインセンサスおよびプロットサンプリングを実施し，子実体436個，菌根327根端，菌核3個の計766サンプルを採取した。形態分類およびrDNA-ITS領域を対象とした分子生物学的解析の結果，23科41属159 MOTUの菌根菌が同定され，林内にはテングタケ属，イグチ科，カラハツタケ属，ベニタケ属，ロウタケ属，ラシャタケ属が広く分布していることが確認された。一方で，ショウロ属やヌメリイグチ属など，センサスルート上やプロット内の各所において局所的に分布する菌種も多数確認された。これらのことから，人為的攪乱を受ける比較的小面積の二次林においても多様な菌根菌種が生息していることが明らかになった。また，プロットから得られた菌根菌を対象とした階層クラスター分析では，各プロットは共通の頻出群を有するものの，局所的に分布する科によって特徴づけられた。樹種構成の相違や人為的攪乱，林内に存在する多様な微地形といった要因が群集組成に影響を及ぼしていることが示唆された。

Long-term nitrogen-addition-induced shifts in the ectomycorrhizal fungal community are associated with changes in fine root traits and soil properties in a mixed Pinus koraiensis forest

Nitrogen (N) deposition has marked effects on the structure and function of global forest ecosystems. Many forest tree species rely upon a symbiotic association with ectomycorrhizal (ECM) fungi to enhance nutrient acquisition, which affects nutrient and carbon (C) dynamics in forest ecosystems. A better understanding of the characteristics of ECM fungal diversity and composition and their primary determinants under N deposition will help us to identify the mechanisms underlying N-induced effects on forest nutrient and C cycling. In the present study, we explored the effects of long-term N addition (10 years) on the diversity and community composition of ECM fungi identified from fine roots of Corylus mandshurica, Pinus koraiensis and Tilia amurensis in a mixed temperate forest on Changbai Mountain in north-eastern China. We observed that N addition decreased the Shannon and Simpson indices of the ECM fungal community colonizing C. mandshurica and T. amurensis. Neither the Chao1 index nor the observed species richness of the ECM fungal community colonizing the three species was impacted by N addition. Nitrogen addition significantly decreased the fine root and stele diameter of C. mandshurica, and it significantly decreased the cortical thickness of fine roots of both P. koraiensis and T. amurensis. Nitrogen addition had a consistently negative effect on the mycorrhizal colonization of fine roots, but it did not affect the branching intensity of fine roots of the three tree species. Nitrogen addition altered the ECM fungal community composition, which was closely associated with fine root traits, such as mycorrhizal colonization, and edaphic factors, such as soil pH, soil total N concentration and soil CN ratio. An altered ECM fungal community composition was accompanied by shifts in the nutrient acquisition ability, as characterized by exploration types of ECM fungi. These findings have important implications for a better understanding of the effects of a changing ECM fungal community on the C and N cycling of forest ecosystems under increasing N deposition.

Characterization of ectomycorrhizal fungal communities associated with tree species on an iron tailings deposit undergoing restoration

Vegetation restoration is an effective method to improve the ecological environment of mine tailings, which has a profound impact on the potential ecological functions of soil fungal communities; yet, little is known about its beneficial effect on soil ectomycorrhizal fungal community. In this study, the responses of soil characteristics and soil ectomycorrhizal fungal community diversity and structure to different revegetation, as well as the contribution of soil factors to soil ectomycorrhizal community were investigated in Liaoning Province, China. As we anticipated, the presence of vegetation significantly improved most soil properties we studied. What’s more, compared to Korean pine (Pinus koraiensis Sieb. et Zucc.), Chinese poplar (Populus simonii Carr), and black locust (Robinia pseudoacacia L) could better improve soil total carbon, total nitrogen, total phosphorus, and available phosphorus. In addition, soil ectomycorrhizal fungal community diversity in black locust was greater than Korean pine and Populus simonii. Nonmetric multidimensional scaling analyses indicated that soil ectomycorrhizal community significantly differed depending on different revegetation types. Thus, these results indicated that black locust could be a suitable species for the revegetation of iron mine tailings. The study provided theoretical basis for ecological restoration of iron mine tailings using local plant species.

Diversity of Ectomycorrhizal Fungi in Young Pedunculate Oak Stand from Morović, Serbia

Although oaks belong to the economically most important hardwood tree species in Europe, data on the diversity of ectomycorrhizal (ECM) fungi on pedunculate oak in the Republic of Serbia are deficient. The aim of our study was to give the first insight into the diversity of ECM fungi in the young stand of pedunculate oak in Morović, Serbia. The combination of morpho-anatomical characterization and molecular analysis was used for determination of ECM fungi on penduculate oak. Studied parameters included: (i) counting of vital ECM root tips, (ii) calculation of diversity indices and (iii) classification of morphotypes of ectomycorrhizae into the exploration types. Eighteen ECM fungal taxa were recorded in the studied young pedunculate oak stand. Seven of them were identified to the level of species, eight fungi to the genus, two to the family level, and one ECM fungus remained unidentified. ECM communities consisted of a small number of abundant taxa and a bigger number of rare taxa. The most abundant ECM fungi were Entoloma sp., Thelephoraceae sp., Russula cf. odorata and Russula lilacea, which made association with the majority of ECM root tips. Short-distance exploration type (ET) dominated, followed by medium-distance smooth ET and contact ET, while long-distance ET and medium-distance fringe ET were rare at the Morović site. Values of diversity indices obtained in the studied pedunculate oak stand were comparable to the ones recorded in different oak stands over Europe. In order to get a deeper insight into the diversity of ECM fungi on pedunculate oak there is a need to continue research on increased number of sites and also to include seasonal dynamics.

Ectomycorrhizal fungal communities of Swiss stone pine (Pinus cembra) depend on climate and tree age in natural forests of the Alps

Abstract Background and Aims Pinus cembra represent a typical and important tree species growing in European subalpine and alpine habitats. The ectomycorrhizal (ECM) fungal communities associated to this tree under natural conditions are largely unknown. Methods In this study, we investigated the ECM fungal abundance and composition at four high-altitude sites (two northern-exposed and two southern-exposed habitats) in South Tyrol (Italy), and included also two different age classes of P. cembra. The ECM partners were characterized morphologically, and identified by rDNA ITS sequence analysis. Results The degree of mycorrhization in adult P. cembra was typically 100% in these natural habitats, with a total species diversity of 20 ECM species. The four high-altitude sites were similar concerning their species richness and mycobiont diversity, but they differed significantly in ECM species composition. Young P. cembra had a mycorrhization degree of 100% and a total of 10 species were observed. All mycorrhizal partners of naturally regenerated young P. cembra were only detected in one specific location, with the exception of Cenococcum sp. and Amphinema sp. which were detected at two sites. Young trees harbour a distinct ectomycorrhizal fungal diversity, which is clearly lower than the diversity detected in adult P. cembra trees. The P. cembra bolete (Suillus plorans) is the most important symbiotic partner of P. cembra at Southern Tyrolean high-altitude sites and is known for its strict, species-specific host association. Conclusions The ectomycorrhizal fungal community composition strongly depends on geographic region and on the slope exposure (north or south) of the site.

Changes in Soil Ectomycorrhizal Fungi Community in Oak Forests along the Urban–Rural Gradient

The ectomycorrhizal fungi communities of forests are closely correlated with forest health and ecosystem functions. To investigate the structure and composition of ectomycorrhizal fungi communities in oak forest soil and their driving factors along the urban–rural gradient, we set up a Quercus acutissima forest transect and collected samples from the center to the edge of Jinan city (urban, suburban, rural). The results showed that the ectomycorrhizal fungal community composition at the phyla level mainly included Basidiomycota and Ascomycota in three sites. At the genus level, the community compositions of ectomycorrhizal fungi, along the urban–rural gradient, exhibited significant differences. Inocybe, Russula, Scleroderma, Tomentella, Amanita and Tuber were the dominant genera in these Quercus acutissima forests. Additionally, the diversity of ectomycorrhizal fungi was the highest in rural Quercus acutissima forest, followed by urban and suburban areas. Key ectomycorrhizal fungi species, such as Tuber, Russula and Sordariales, were identified among three forests. We also found that pH, soil organic matter and ammonium nitrogen were the main driving factors of the differences in ectomycorrhizal fungi community composition and diversity along the urban–rural gradient. Overall, the differences in composition and diversity in urban–rural gradient forest were driven by the differences in soil physicochemical properties resulting from the forest location.