Ecosystem-level Processes Research Articles

Evolution and Conservation of Central African Biodiversity: Priorities for Future Research and Education in the Congo Basin and Gulf of Guinea

AbstractThe tropical forests of the Congo Basin and Gulf of Guinea harbor some of the greatest terrestrial and aquatic biological diversity in the world. However, our knowledge of the rich biological diversity of this region and the evolutionary processes that have shaped it remains limited, as is our understanding of the capacity for species to adapt or otherwise respond to current and projected environmental change. In this regard, research efforts are needed to increase current scientific knowledge of this region's biodiversity, identify the drivers of past diversification, evaluate the potential for species to adapt to environmental change and identify key populations for future conservation. Moreover, when evolutionary research is combined with ongoing environmental monitoring efforts, it can also provide an important set of tools for assessing and mitigating the impacts of development activities. Building on a set of recommendations developed at an international workshop held in Gabon in 2011, we highlight major areas for future evolutionary research that could be directly tied to conservation priorities for the region. These research priorities are centered around five disciplinary themes: (1) documenting and discovering biodiversity; (2) identifying drivers of evolutionary diversification; (3) monitoring environmental change; (4) understanding community and ecosystem level processes; (5) investigating the ecology and epidemiology of disease from an evolutionary perspective (evolutionary epidemiology). Furthermore, we also provide an overview of the needs and priorities for biodiversity education and training in Central Africa.

Assessing the in situ fertilization status of two marine copepod species, Temora longicornis and Eurytemora herdmani; how common are unfertilized eggs in nature?

We utilized an egg staining technique to measure the in situ fertilization success of two marine copepod species, Temora longicornis and Eurytemora herdmani from May to October 2008 in coastal Maine and correlated fertilization success with environmental conditions in their habitat. T. longicornis is a free spawning species that releases eggs into the ambient seawater after mating. In contrast, E. herdmani carries eggs in an egg sac until they hatch. The proportion of fertilized eggs within E. herdmani egg sacs was significantly higher than the freely spawned clutches of T. longicornis. This may be a result of the asymmetrical costs associated with carrying vs. spawning unfertilized eggs. T. longicornis frequently laid both fertilized and unfertilized eggs within their clutch. T. longicornis fertilization was negatively associated with chlorophyll concentration and positively associated with population density in their local habitat. The fertilization status of E. herdmani egg sacs was high throughout the season, but the proportion of ovigerous females was negatively associated with an interaction between predators and the proportion of females in the population. This study emphasizes that, in addition to population level processes, community and ecosystem level processes strongly influence the fertilization success and subsequent productivity of copepods.

Ecosystem Succession and Nutrient Retention: Vitousek and Reiners' Hypothesis

What mechanisms mediate the flow of energy and cycling of nutrients during ecological succession? Are they linked in time and across space? In 1969, Eugene P. Odum proposed a series of hypotheses that caused the ecological community to think critically about patterns and processes (sensu Watt 1947) during ecological succession and how they might be linked in a causal manner. Odum’s perspective on the process of succession, or “the strategy of ecosystem development” as he termed it, was undoubtedly shaped by the intellectual influence of his mentor, Victor Shelford, as well as Shelford’s contemporaries such as Fredrick Clements. They shared the idea that ecological communities possessed emergent properties, wherein the whole is greater than the sum of its parts (sensu Phillips 1934). Inasmuch, the 24 hypotheses Odum (1969) articulated were an amalgam of holism and reductionism that created his rationale for the way energy flows and nutrients cycle within ecosystems. It is within this context that Peter Vitousek and Bill Reiners derived ideas that are fundamental to our understanding of energy flow and nutrient cycling in terrestrial ecosystems, ideas that have profoundly shaped my thinking as an ecologist.

Linking Population Processes and Ecosystem Processes Through Changes in Plant Chemistry

It’s refreshing to watch the ongoing synthesis between population-level processes and ecosystemlevel processes that is taking place in the ecological literature. After decades during which the two fields developed without adequate interaction, population ecology and ecosystem ecology are coming back together. And we shouldn’t be surprised; ecosystem ecology emerged in large part from studies of successional processes (Gleason 1926, Clements 1936), and Tansley (1935) was explicit in pointing out that ecosystems exist as interactions between organisms and the abiotic environment.

A meta-analysis of the effects of nutrient enrichment on litter decomposition in streams.

The trophic state of many streams is likely to deteriorate in the future due to the continuing increase in human-induced nutrient availability. Therefore, it is of fundamental importance to understand how nutrient enrichment affects plant litter decomposition, a key ecosystem-level process in forest streams. Here, we present a meta-analysis of 99 studies published between 1970 and 2012 that reported the effects of nutrient enrichment on litter decomposition in running waters. When considering the entire database, which consisted of 840 case studies, nutrient enrichment stimulated litter decomposition rate by approximately 50%. The stimulation was higher when the background nutrient concentrations were low and the magnitude of the nutrient enrichment was high, suggesting that oligotrophic streams are most vulnerable to nutrient enrichment. The magnitude of the nutrient-enrichment effect on litter decomposition was higher in the laboratory than in the field experiments, suggesting that laboratory experiments overestimate the effect and their results should be interpreted with caution. Among field experiments, effects of nutrient enrichment were smaller in the correlative than in the manipulative experiments since in the former the effects of nutrient enrichment on litter decomposition were likely confounded by other environmental factors, e.g. pollutants other than nutrients commonly found in streams impacted by human activity. However, primary studies addressing the effect of multiple stressors on litter decomposition are still few and thus it was not possible to consider the interaction between factors in this review. In field manipulative experiments, the effect of nutrient enrichment on litter decomposition depended on the scale at which the nutrients were added: stream reach > streamside channel > litter bag. This may have resulted from a more uniform and continuous exposure of microbes and detritivores to nutrient enrichment at the stream-reach scale. By contrast, nutrient enrichment at the litter-bag scale, often by using diffusing substrates, does not provide uniform controllable nutrient release at either temporal or spatial scales, suggesting that this approach should be abandoned. In field manipulative experiments, the addition of both nitrogen (N) and phosphorus (P) resulted in stronger stimulation of litter decomposition than the addition of N or P alone, suggesting that there might be nutrient co-limitation of decomposition in streams. The magnitude of the nutrient-enrichment effect on litter decomposition was higher for wood than for leaves, and for low-quality than for high-quality leaves. The effect of nutrient enrichment on litter decomposition may also depend on climate. The tendency for larger effect size in colder regions suggests that patterns of biogeography of invertebrate decomposers may be modulating the effect of nutrient enrichment on litter decomposition. Although studies in temperate environments were overrepresented in our database, our meta-analysis suggests that the effect of nutrient enrichment might be strongest in cold oligotrophic streams that depend on low-quality plant litter inputs.

Imaging spectroscopy links aspen genotype with below-ground processes at landscape scales.

Fine-scale biodiversity is increasingly recognized as important to ecosystem-level processes. Remote sensing technologies have great potential to estimate both biodiversity and ecosystem function over large spatial scales. Here, we demonstrate the capacity of imaging spectroscopy to discriminate among genotypes of Populus tremuloides (trembling aspen), one of the most genetically diverse and widespread forest species in North America. We combine imaging spectroscopy (AVIRIS) data with genetic, phytochemical, microbial and biogeochemical data to determine how intraspecific plant genetic variation influences below-ground processes at landscape scales. We demonstrate that both canopy chemistry and below-ground processes vary over large spatial scales (continental) according to aspen genotype. Imaging spectrometer data distinguish aspen genotypes through variation in canopy spectral signature. In addition, foliar spectral variation correlates well with variation in canopy chemistry, especially condensed tannins. Variation in aspen canopy chemistry, in turn, is correlated with variation in below-ground processes. Variation in spectra also correlates well with variation in soil traits. These findings indicate that forest tree species can create spatial mosaics of ecosystem functioning across large spatial scales and that these patterns can be quantified via remote sensing techniques. Moreover, they demonstrate the utility of using optical properties as proxies for fine-scale measurements of biodiversity over large spatial scales.

Biodiversity and species identity shape the antifungal activity of bacterial communities.

Soils host diverse communities of interacting microbes and the nature of interspecific interactions is increasingly recognized to affect ecosystem-level processes. Antagonistic interactions between bacteria and fungi are of particular relevance for soil functioning. A number of soil bacteria produce secondary metabolites that inhibit eukaryotic growth. Antibiosis may be stimulated in the presence of competing bacteria, and we tested if biodiversity within bacterial communities affects their antagonistic activity against fungi and fungal-like species. We set up Pseudomonas communities of increasing diversity and measured the production of the broad spectrum antifungal compound 2,4-DAPG and their antagonistic activity against different eukaryotes. Diversity increased DAPG concentration and antifungal activity, an effect due to a combination of identity and interactions between species. Our results indicate that investment of pseudomonads into broad spectrum anti-eukaryotic traits is determined by both community composition and diversity and this provides new avenues to understand interactions between bacterial and fungal communities.

Bacterial epibionts of Daphnia: a potential route for the transfer of dissolved organic carbon in freshwater food webs

The identification of interacting species and elucidation of their mode of interaction may be crucial to understand ecosystem-level processes. We analysed the activity and identity of bacterial epibionts in cultures of Daphnia galeata and of natural daphnid populations. Epibiotic bacteria incorporated considerable amounts of dissolved organic carbon (DOC), as estimated via uptake of tritiated leucine: three times more tracer was consumed by microbes on a single Daphnia than in 1 ml of lake water. However, there was virtually no incorporation if daphnids were anaesthetised, suggesting that their filtration activity was essential for this process. Microbial DOC uptake could predominantly be assigned to microbes that were located on the filter combs of daphnids, where the passage of water would ensure a continuously high DOC supply. Most of these bacteria were Betaproteobacteria from the genus Limnohabitans. Specifically, we identified a monophyletic cluster harbouring Limnohabitans planktonicus that encompassed sequence types from D. galeata cultures, from the gut of Daphnia magna and from daphnids of Lake Zurich. Our results suggest that the epibiotic growth of bacteria related to Limnohabitans on Daphnia spp. may be a widespread and rather common phenomenon. Moreover, most of the observed DOC flux to Daphnia in fact does not seem to be associated with the crustacean biomass itself but with its epibiotic microflora. The unexplored physical association of daphnids with heterotrophic bacteria may have considerable implications for our understanding of carbon transfer in freshwater food webs, that is, a trophic 'shortcut' between microbial DOC uptake and predation by fish.

Biotic and abiotic controls on biogenic volatile organic compound fluxes from a subalpine forest floor

Nonmethane biogenic volatile organic compounds (BVOCs) play key roles in the atmosphere, where they can influence a wide range of chemical processes, and in soils, where they can alter the rates of biogeochemical cycles and impact the growth of plants and soil organisms. However, the diversity and quantities of BVOCs released from or taken up by soils remain poorly characterized as do the biotic and abiotic controls on these fluxes. Here we used proton transfer reaction mass spectrometry to quantify BVOC flux rates from soils with and without active root systems in a subalpine coniferous forest. The total measured BVOC flux averaged 102 nmol m−2 h−1 (an estimated 2.0 µg-C m−2 h−1). The individual BVOCs with the highest net emissions from soil included monoterpenes and methanol (averaging 646 and 641 ng-C m−2 h−1, respectively) while soil represented a net sink of isoprene (−98 ng-C m−2 h−1) and formaldehyde (−37 ng-C m−2 h−1). Tree roots, directly or indirectly, contributed an average of 53% of the total carbon emitted from the soil as BVOCs, with methanol and acetaldehyde among those BVOCs most strongly associated with active root presence. The fluxes of most of the dominant BVOCs emitted from soil, including methanol, increased linearly with increasing temperature. Together the fluxes of certain BVOCs into or out of the forest floor (particularly methanol, isoprene, and monoterpenes) are likely relevant to ecosystem-level processes and belowground ecology, but these fluxes are highly variable and are strongly controlled by both root presence and soil abiotic conditions.

Microbial regulation of global biogeochemical cycles.

Microbial regulation of global biogeochemical cycles.

Intra-guild predation among early benthic phase red and blue king crabs: Evidence for a habitat-mediated competitive advantage

The apparent shift in predominance of commercial crab species from blue king crab (Paralithodes platypus) to red king crab (Paralithodes camtschaticus) around the Pribilof Islands, Alaska, USA, may be driven by ecosystem-level processes such as competitive displacement or predation during early life stages. Specifically, intra-guild predation among species during the early benthic phase might be a source of mortality limiting blue king crab population recovery. In a laboratory experiment, we evaluated how varying ratios of prey species (year-0 blue and red king crabs) and habitat type (shell and cobble) affect prey preference of year-1 red king crabs. Year-0 red king crabs were preferentially consumed over blue king crabs in shell habitat, but not cobble, likely because the smaller interstitial spaces in shell reduced predator foraging efficiency and predator–prey encounter rates. Blue king crabs had high levels of crypsis regardless of habitat type or predator presence/absence, while red king crabs were less cryptic overall compared to blue king crabs, but crypsis increased when predators were present. Preference for red king crabs in shell may reflect divergent adaptations between species for minimizing predation. Blue king crab's light, mottled coloration and relatively smooth, flat carapace is well adapted for visual and physical crypsis in shell habitat, while the monochromatic, dark coloration and pronounced spination of red king crabs may make them more conspicuous. Our results show that habitat can mediate intra-guild predation between Paralithodes species and suggest that shell material may provide blue king crabs a competitive advantage over red king crabs. The extent of shell habitat may be an important factor regulating blue king crab distribution or the recovery of depleted populations around the Pribilof Islands.

Towards a general theory of biodiversity for the Anthropocene

Imagine a hypothetical scenario. Imagine you are traveling through space and come across Earth for the first time ... what would you be most struck by? Would it be the water that gives our planet the nickname ‘blue-marble’? I doubt it. We’ve now found water on the moon (Saal et al., 2008), on several other planets in our own solar system (Carr et al., 1998; Malin and Edgett, 2000), and a single survey of the Milky Way found >270 planets in the so-called “habitable zone,” warm enough for liquid water (Borucki et al., 2011). Would you instead be struck by the mountains, canyons and other geological features that are most visible from space? Again, it’s doubtful. Geologists tell us there are few, if any, landforms that are wholly unique to Earth (Baker, 2008; Dietrich and Perron, 2006), and you probably would have seen them all before. Based on our current understanding of the universe, the only thing a space-traveler is likely to be struck by, and the one thing that appears to be fundamentally unique to Earth, is its remarkable variety of life. Ever since the first prokaryotic cells evolved more than 3 billion years ago, the diversity of life on Earth has steadily increased, punctuated by only a handful of extinction events. Our best guess is there are perhaps 9 million forms of eukaryotic organisms on this planet (Mora et al., 2011). The number of prokaryotic organisms is largely unknown, but a single hydrothermal vent on the bottom of the ocean can harbor an astounding 37,000 unique types of microbes (Huber et al., 2007). While the great variety of life is perhaps the most striking feature of Earth, loss of this biodiversity is one of the most striking forms of environmental change in the Anthopocene. The percentage of species that have gone extinct ranges from just < 1% to 13% of described taxa depending on the group considered (Barnosky et al., 2011). But rates of extinction are occurring orders of magnitude faster than what is ‘normal’ in the fossil record. Projections suggest that if these high rates of extinction continue, biodiversity loss could equal or exceed the five prior mass extinctions (loss of 75% or more of known taxa) in 240 to 540 years (Barnosky et al., 2011). So what? What does it matter if we lose 75% of all life forms on the planet over the next few centuries? Will Earth become any less hospitable for humans? Will this planet still be able provide people with the food, water, air, and other goods and services needed to survive and prosper? Won’t evolution simply replace all of that lost diversity with life forms that are more fit for a human dominated planet? And if evolution does compensate for extinctions in the Anthropocene, what ecological roles will those newly evolved species play? These are pressing questions as we ponder what future Earth will be like. The variety of life that has evolved over 3.6-billion years is a catalog of biological resources from which we produce nearly all of the goods and services needed for humanity to prosper (Daily et al., 1997; MEA, 2005; Cardinale et al., 2012). If we are to have any hope of predicting how human domination of the planet will impact our own prosperity in an era that will have fewer biological options, we must develop a general theory of Earth’s biodiversity that can predict both the causes as well as the consequences of biological variation. Fortunately, biologists have made great strides on developing models that simultaneously explain three dimensions of biodiversity: (a) the evolutionary origin of biodiversity, (b) the ecological maintenance of biodiversity, and (c) the ecosystem-level function of biodiversity. Below I describe one set of evolutionary and ecological models that are beginning to show remarkably consistency in form. These models are by no means the only descriptions of how diversity originates, why species coexist, or how diversity influences ecosystem function. But the particular models discussed here do have a common thread that suggests biologists from different sub-disciplines are, in some instances, converging on a suite of equations, all with similar terms that collectively predict the origin, maintenance, and function of biodiversity. Domain Editor-in-Chief Donald R. Zak, University of Michigan

Cylindrospermopsis raciborskii dominates under very low and high nitrogen-to-phosphorus ratios

In freshwater ecosystems, a variety of factors mediate phytoplankton community structure, including herbivore community structure, light availability, temperature, mixing, and absolute and relative nutrient concentrations (total nitrogen (TN), total phosphorus (TP)). Ecological stoichiometry examines how the nutrient content of organisms and their environment may mediate population-, community-, and ecosystem-level processes. The manipulation of N:P ratios is a widely regarded tool for managing phytoplankton species composition given that nitrogen-fixing cyanobacteria should dominate algal communities under relatively low N:P (<64:1, by atoms) given their ability to convert dissolved dinitrogen gas into organic nitrogen. However, due to the physiological expense of nitrogen fixation, diazotrophs should be outcompeted by non-nitrogen fixing phytoplankton under higher N:P when other environmental factors are similar. We tested this hypothesis in a field experiment using 2500-L limnocorrals installed in a eutrophic lake (ambient N:P ∼40:1 (by atoms); TN ∼1360 μgL−1; TP ∼75 μgL−1). At the start of the experiment, we randomly assigned limnocorrals among the ambient (40:1) and low (7:1) or high (122:1) N:P treatments (n = 4 replicates/treatment), which were established by adding P or N at the start of the experiment, respectively. The phytoplankton community in the enclosures at the start of the experiment was diverse (i.e., 18 phytoplankton genera) and dominated by chlorophytes (including Coelastrum and Scenedesmus (30% and 13% of total biomass, respectively)) and cyanobacteria (including Anabaena and Cylindrospermopsis (23% and 17% of total biomass, respectively)). In contrast to predictions based on ecological stoichiometry, the phytoplankton community in all N:P treatments increased in abundance and was almost entirely composed of the nitrogen-fixing cyanobacterium, Cylindrospermopsis raciborskii, by the conclusion of the study. Moreover, concentrations of the cyanobacterial neurotoxin, saxitoxin, were enhanced under the two highest N:P conditions. The ability of C. raciborskii to dominate phytoplankton communities under such extreme N:P shows that short-term management of nutrient stoichiometry through fertilization is not likely to be effective for controlling blooms of this noxious cyanobacterium and may help to explain the rapid expansion of this invasive species to temperate latitudes.

Rhizosphere stoichiometry: are C : N : P ratios of plants, soils, and enzymes conserved at the plant species‐level?

As a consequence of the tight linkages among soils, plants and microbes inhabiting the rhizosphere, we hypothesized that soil nutrient and microbial stoichiometry would differ among plant species and be correlated within plant rhizospheres. We assessed plant tissue carbon (C) : nitrogen (N) : phosphorus (P) ratios for eight species representing four different plant functional groups in a semiarid grassland during near-peak biomass. Using intact plant species-specific rhizospheres, we examined soil C : N : P, microbial biomass C : N, and soil enzyme C : N : P nutrient acquisition activities. We found that few of the plant species' rhizospheres demonstrated distinct stoichiometric properties from other plant species and unvegetated soil. Plant tissue nutrient ratios and components of below-ground rhizosphere stoichiometry predominantly differed between the C4 plant species Buchloe dactyloides and the legume Astragalus laxmannii. The rhizospheres under the C4 grass B. dactyloides exhibited relatively higher microbial C and lower soil N, indicative of distinct soil organic matter (SOM) decomposition and nutrient mineralization activities. Assessing the ecological stoichiometry among plant species' rhizospheres is a high-resolution tool useful for linking plant community composition to below-ground soil microbial and nutrient characteristics. By identifying how rhizospheres differ among plant species, we can better assess how plant-microbial interactions associated with ecosystem-level processes may be influenced by plant community shifts.

Determination of Microbial Extracellular Enzyme Activity in Waters, Soils, and Sediments using High Throughput Microplate Assays

Much of the nutrient cycling and carbon processing in natural environments occurs through the activity of extracellular enzymes released by microorganisms. Thus, measurement of the activity of these extracellular enzymes can give insights into the rates of ecosystem level processes, such as organic matter decomposition or nitrogen and phosphorus mineralization. Assays of extracellular enzyme activity in environmental samples typically involve exposing the samples to artificial colorimetric or fluorometric substrates and tracking the rate of substrate hydrolysis. Here we describe microplate based methods for these procedures that allow the analysis of large numbers of samples within a short time frame. Samples are allowed to react with artificial substrates within 96-well microplates or deep well microplate blocks, and enzyme activity is subsequently determined by absorption or fluorescence of the resulting end product using a typical microplate reader or fluorometer. Such high throughput procedures not only facilitate comparisons between spatially separate sites or ecosystems, but also substantially reduce the cost of such assays by reducing overall reagent volumes needed per sample.

Matrix Intensification Alters Avian Functional Group Composition in Adjacent Rainforest Fragments

Conversion of farmland land-use matrices to surface mining is an increasing threat to the habitat quality of forest remnants and their constituent biota, with consequences for ecosystem functionality. We evaluated the effects of matrix type on bird community composition and the abundance and evenness within avian functional groups in south-west Ghana. We hypothesized that surface mining near remnants may result in a shift in functional composition of avifaunal communities, potentially disrupting ecological processes within tropical forest ecosystems. Matrix intensification and proximity to the remnant edge strongly influenced the abundance of members of several functional guilds. Obligate frugivores, strict terrestrial insectivores, lower and upper strata birds, and insect gleaners were most negatively affected by adjacent mining matrices, suggesting certain ecosystem processes such as seed dispersal may be disrupted by landscape change in this region. Evenness of these functional guilds was also lower in remnants adjacent to surface mining, regardless of the distance from remnant edge, with the exception of strict terrestrial insectivores. These shifts suggest matrix intensification can influence avian functional group composition and related ecosystem-level processes in adjacent forest remnants. The management of matrix habitat quality near and within mine concessions is important for improving efforts to preserveavian biodiversity in landscapes undergoing intensification such as through increased surface mining.

Invasive macrophyte effects on littoral trophic structure and carbon sources

Limited data from terrestrial ecosystems suggest that invasive species can affect energy flow and nutrient cycling in invaded systems. This is likely also true for aquatic ecosystems, yet little information is available on food web effects of invasive macrophytes. This study examined the effects of dominant invasive Eurasian watermilfoil on lake trophic structure and energy flow. Stable isotopes of carbon and nitrogen were used to compare trophic structure in invaded and uninvaded lakes and macrophyte stands. Contribution of native and invasive macrophytes, their epiphyton and detritus to the upper trophic level of lacustrine food webs was partitioned using mixing models. Carbon isotope values of macroinvertebrate consumers were similar to macrophyte-associated production in stands from which they were collected. However, contribution of Eurasian watermilfoil and its epiphyton to higher trophic level was negligible, and littoral fish derived most of their energy from sources associated with native macrophytes, despite their lower abundance. This means that littoral fish may depend on the remaining patches of native macrophytes in lakes invaded by non-native plants. Considering previous findings, these results show that the assessment of ecosystem-level processes is needed to understand the entire range of impacts of invasive species.

A framework for considering ecological interactions for common non-timber forest product species: a case study of mountain date palm (Phoenix loureiroi Kunth) leaf harvest in South India

Many economically important non-timber forest products (NTFPs) come from widespread and common plant species. Harvest of these species often is assumed to be sustainable due to their commonness. However, because of the ecological roles of common species, harvest may affect and be affected by ecological interactions at broader scales, which are rarely considered when evaluating the sustainability of harvest. We use a case study of the mountain date palm (Phoenix loureiroi Kunth), harvested in South India to produce brooms, to present a conceptual framework illustrating how intensive harvest of a common species interacts with other anthropogenic management practices, plant-animal interactions and surrounding environmental conditions. We apply this framework to understanding the impacts of mountain date palm harvest in the southern Western Ghats regions of the Indian states of Tamil Nadu and Karnataka. We integrate data on the extent and levels of commercial harvest, local management practices, the ecological context in which harvest occurs, and research on harvest effects. We use this information to document the intensity and extent of mountain date palm harvest in the study area, identify the ecological implications of harvest, and demonstrate how a framework that considers harvest in the context of ecological communities and ecosystems is important for assessing the impacts of harvest of common NTFP species. We show that mountain date palm leaves are heavily harvested from natural areas in the southern Western Ghats but that harvest levels have declined in recent years. Mountain date palm management and harvest occur within a network of ecological interactions, linking human activities to population-, community-, and ecosystem-level processes. We demonstrate that understanding the effects of return interval of anthropogenic fire, herbivory by wild animals and livestock, as well as the light environment in which harvest occurs are critical to assessing the sustainability of mountain date palm harvest. By considering mountain date palm leaf harvest in the context of ecological interactions at multiple scales, our findings show that sustainability cannot be assessed only from a population-level perspective. This general framework highlights the need to incorporate ecosystem- and community-level properties and processes more frequently into assessments of the sustainability of NTFP harvest—especially for widespread and common species—to ensure that their important economic and ecological roles are maintained.

Microbial Contributions to Phosphorus Cycling in Eutrophic Lakes and Wastewater

Phosphorus is a key element controlling the productivity of freshwater ecosystems, and microbes drive most of its relevant biogeochemistry. Eutrophic lakes are generally dominated by cyanobacteria that compete fiercely with algae and heterotrophs for the element. In wastewater treatment, engineers select for specialized bacteria capable of sequestering phosphorus from the water, to protect surface waters from further loading. The intracellular storage molecule polyphosphate plays an important role in both systems, allowing key taxa to control phosphorus availability. The importance of dissolved organic phosphorus in eutrophic lakes and mineralization mechanisms is still underappreciated and understudied. The need for functional redundancy through biological diversity in wastewater treatment plants is also clear. In both systems, a holistic ecosystems biology approach is needed to understand the molecular mechanisms controlling phosphorus metabolism and the ecological interactions and factors controlling ecosystem-level process rates.

New handbook for standardised measurement of plant functional traits worldwide

Plant functional traits are the features (morphological, physiological, phenological) that represent ecological strategies and determine how plants respond to environmental factors, affect other trophic levels and influence ecosystem properties. Variation in plant functional traits, and trait syndromes, has proven useful for tackling many important ecological questions at a range of scales, giving rise to a demand for standardised ways to measure ecologically meaningful plant traits. This line of research has been among the most fruitful avenues for understanding ecological and evolutionary patterns and processes. It also has the potential both to build a predictive set of local, regional and global relationships between plants and environment and to quantify a wide range of natural and human-driven processes, including changes in biodiversity, the impacts of species invasions, alterations in biogeochemical processes and vegetation–atmosphere interactions. The importance of these topics dictates the urgent need for more and better data, and increases the value of standardised protocols for quantifying trait variation of different species, in particular for traits with power to predict plant- and ecosystem-level processes, and for traits that can be measured relatively easily. Updated and expanded from the widely used previous version, this handbook retains the focus on clearly presented, widely applicable, step-by-step recipes, with a minimum of text on theory, and not only includes updated methods for the traits previously covered, but also introduces many new protocols for further traits. This new handbook has a better balance between whole-plant traits, leaf traits, root and stem traits and regenerative traits, and puts particular emphasis on traits important for predicting species’ effects on key ecosystem properties. We hope this new handbook becomes a standard companion in local and global efforts to learn about the responses and impacts of different plant species with respect to environmental changes in the present, past and future.