Ecological Processes Research Articles

The Possibilities of the Actual Orientation of the Green Building in Iraq

This research covers the zone between Iraq and Iran. The first investigated region is the 'Mesopotamian Marshes' or Iraqi-Iran Marshes, it's a wetland zone located in southern Iraq and partly in southwestern Iran. The other region is a desert district which includes a prominent part of the southern and western parts of Iraq and part of Iran. The last is the center city of Basra. The building materials were the most important building element that affected the conformation of vernacular habitats In this study, we needed to focus on the effects of ecological and energy-efficiency processes in creating vernacular habitats and the selection of optimal building systems and materials in this part of the world which can be an essential point for sustainable environmental building processes in the future. Reeds, clay, straw, bricks, and wood were the most popular building materials used by builders from this region. The impact of building material on the environment embodies the essential method implicitly significant in this research to effectively determine traditional building materials in the environment in addition to comparative analysis which presents an essential factor of our analysis in addition to the impact of environments on building systems. The main target of this study is to benefit designers and building engineers in their pursuit to find optimal and competent solutions suitable for specific local microclimates using traditional methods in the design process that are sustainable and ecological.

Contemporary Wildfires Not More Severe Than Historically: More Fire of All Severities Needed to Sustain and Adapt Western US Dry Forests as Climate Changes

Fire-adapted dry forests and nearby communities both need to be sustained as climate changes. Wildfires have increased in the ~25.5 million ha of dry forests in the western US, but are wildfires already more severe than historical (preindustrial) wildfires, warranting suppression, or is more fire needed? Recent research suggests that a higher percentage are more severe, but is this from more high-severity fire (≥70% mortality) or simply less lower-severity fire? To resolve this question, I compared government fire-severity data from 2000–2020 with corresponding government Landfire historical data, representing the last few centuries. The fire rotation (expected time to burn across an area of interest) for high-severity fire was 477 years recently versus 255 years historically, a deficit, not a surplus. High-severity fire would need to increase 1.9 times to equal historical rates. Thus, reducing high-severity fire through fuel reductions is fire suppression, which has significant well-known adverse ecological impacts. These include reductions in (1) natural burn patches, snags, and non-forest openings, that favor diverse fire-adapted species, and (2) landscape heterogeneity that can limit future disturbances and enhance landscape ecological processes. Even larger deficits were in moderate (4.4 times) and low (5.8 times) fire severities. However, if only these lower severities were restored, the high-severity percentage would correspondingly be reduced to low levels. All fire severities are needed to provide a variety of post-fire settings that favor a broad suite of selection pressures and adaptations to emerging climate. This paper shows that to sustain and adapt dry forests and nearby communities to fire and climate change, the billions spent on fuel reductions to reduce high-severity fire can be redirected to protecting the built environment, fostering both safe and sustainable dry forests and human communities.

Ecological city concept: Challenge and future research agenda in urban ecology perspective

Cities are no longer viewed as creatures with a linear-climax-established cycle but as ecosystems with dynamic and complicated processes, with people as the primary component. Thus, we must understand urban ecology’s structure and function to create urban planning and appreciate the mechanisms, dynamics, and evolution that connect human and ecological processes. The ecological city (ecocity) is one of the city conceptions that has evolved with the perspective of urban ecology history. The concept of ecocity development within urban ecology systems pertains to recognizing cities as complex ecosystems primarily influenced by human activities. In this context, individuals actively engage in dynamic problem-solving approaches to address environmental challenges to ensure a sustainable and satisfactory quality of life for future generations. Therefore, it is necessary to study how ecocity has developed since it was initiated today and how it relates to the urban ecology perspective. This study aims to investigate the progression of scholarly publications on ecocity research from 1980 to 2023. Additionally, it intends to ascertain the trajectory of ecological city research trends, establish connections between scientific concepts, and construct an ecological city science network using keyword co-occurrence analysis from the urban ecology perspective. The present study used a descriptive bibliometric analysis and literature review methodology. The data was obtained by utilizing the Lens.org database, was conducted using the VOS (Visualization of Similarities) viewer software for data analysis. The urban ecology research area ecology of cities can be studied further from density visualization of ecosystem services and life cycle assessment. Finally, the challenges and future agenda of ecocity research include addressing humans by modeling functions or processes that connect humans with ecosystems (ecology of cities), urban design, ecological imperatives, integration research, and improving the contribution to environmental goals, spatial distribution, agriculture, natural resources, policy, economic development, and public health.

Is dirofilariosis an emerging conservation threat in wild carnivores across the Palearctic?

AbstractDirofilaria species are mosquito‐borne filarial nematodes, with a high veterinary and public health importance, but growing evidence also indicates their frequent occurrence in wildlife. Wild animals may play an important role in the maintenance, transmission and spread of dirofilariosis, but we have little understanding of the ecological and environmental processes that drive infection dynamics in these hosts. Here, we summarise the current knowledge about the distribution of Dirofilaria spp. across carnivore host species and geographic localities in the Palearctic region. This summary highlights that some of these sylvatic species may be important reservoirs of the pathogen, and identifies research trends and biases in the surveillance and monitoring of this host–parasite system in the wild. Furthermore, we provide directions for future research for a better understanding of the threat these parasites may pose to wild mammals.

Plant trait dissimilarity increases competitive interactions among co‐occurring plants

Abstract Plant–plant interactions, often studied in the context of plant traits, are considered crucial assembly mechanisms for plant communities and offer insights into how neighbours affect growth. Three key questions regarding these interactions have theoretical importance but limited empirical support: (1) does similarity in plant traits enhance competitive interactions among species, (2) is the “competitive environment” determined through plant traits of the resident species, and (3) do greater species diversity and niche use result in increased competition among co‐occurring species. Here we use a simple experimental design to directly test these foundational questions. In a mesocosm experiment using native grassland fragments, we investigated our questions simultaneously by manipulating trait relationships among resident and colonizing plants. To assess the net impact of neighbours on plant growth, we measured the degree of suppression experienced by focal plants compared to growth in the absence of neighbours. We further tested whether trait‐function relationships are context‐dependent by modifying available resources. Contrary to the limiting similarity hypothesis, we found that reduced overall dissimilarity mitigated neighbour‐induced growth suppression, with more negative effects occurring among dissimilar neighbours. The influence of trait dissimilarity depended on nutrient context and was stronger under increased resource availability. We found little support for the idea that specific plant traits are “functional” in creating competitive environments: no community traits (community weighted means) were associated with net neighbour effects. In contrast, resource supply significantly affected species interactions, with increased resources exacerbating negative neighbour effects on plant growth. We found that plant trait dissimilarity does function in competition but is contingent on resource context. However, trait values were not inherently competitive: traits may have physiological functions but did not function in focal plants' competitive response. We provide some of the limited data directly testing the core mechanisms of community assembly. We encourage such direct experimental tests as they are essential to building an understanding of ecological processes. Read the free Plain Language Summary for this article on the Journal blog.

Colonial-driven extinction of the blue antelope despite genomic adaptation to low population size

Low genomic diversity is generally indicative of small population size and is considered detrimental by decreasing long-term adaptability.1,2,3,4,5,6 Moreover, small population size may promote gene flow with congeners and outbreeding depression.7,8,9,10,11,12,13 Here, we examine the connection between habitat availability, effective population size (Ne), and extinction by generating a 40× nuclear genome from the extinct blue antelope (Hippotragus leucophaeus). Historically endemic to the relatively small Cape Floristic Region in southernmost Africa,14,15 populations were thought to have expanded and contracted across glacial-interglacial cycles, tracking suitable habitat.16,17,18 However, we found long-term low Ne, unaffected by glacial cycles, suggesting persistence with low genomic diversity for many millennia prior to extinction in ∼AD 1800. A lack of inbreeding, alongside high levels of genetic purging, suggests adaptation to this long-term low Ne and that human impacts during the colonial era (e.g., hunting and landscape transformation), rather than longer-term ecological processes, were central to its extinction. Phylogenomic analyses uncovered gene flow between roan (H.equinus) and blue antelope, as well as between roan and sable antelope (H.niger), approximately at the time of divergence of blue and sable antelope (∼1.9 Ma). Finally, we identified the LYST and ASIP genes as candidates for the eponymous bluish pelt color of the blue antelope. Our results revise numerous aspects of our understanding of the interplay between genomic diversity and evolutionary history and provide the resources for uncovering the genetic basis of this extinct species' unique traits.

Presence of microplastics: Impacts in a marine-coastal environment of the Colombian Caribbean

Part of the contamination of aquatic and terrestrial ecosystems is influenced by mass production, consumption habits, and improper disposal of plastics. Plastic degradation and fragmentation lead to the formation of Microplastics (MPs), small particles that easily infiltrate natural systems and pose ecological risks. These MPs are transported by atmospheric and water circulation dynamics, predominantly accumulating in soils and bodies of water, disrupting ecological processes in water, land, biosphere, and anthroposphere. This contamination adversely affects human productivity and disturbs fauna and flora in ecosystems. MPs can be consumed and bioaccumulated, potentially carrying pathogenic microorganisms and causing intoxication through constant contact. Understanding the environmental impacts of microplastic presence is crucial to identifying and addressing contamination sources. It serves as a foundation for adopting clean and sustainable production practices, minimizing negative impacts, and maximizing positive effects on ecosystems. Environmental education and scientific research play vital roles in raising awareness and fostering societies' involvement in managing emission sources that disturb sensitive ecosystems.

Bacterial and fungal community structures in Hulun Lake are regulated by both stochastic processes and environmental factors.

Microorganisms are a crucial component of lake ecosystems and significant contributors to biogeochemical cycles. However, the understanding of how primary microorganism groups (e.g., bacteria and fungi) are distributed and constructed within different lake habitats is lacking. We investigated the bacterial and fungal communities of Hulun Lake using high-throughput sequencing techniques targeting 16S rRNA and Internal Transcribed Spacer 2 genes, including a range of ecological and statistical methodologies. Our findings reveal that environmental factors have high spatial and temporal variability. The composition and community structures vary significantly depending on differences in habitats. Variance partitioning analysis showed that environmental and geographical factors accounted for <20% of the community variation. Canonical correlation analysis showed that among the environmental factors, temperature, pH, and dissolved oxygen had strong control over microbial communities. However, the microbial communities (bacterial and fungal) were primarily controlled by the dispersal limitations of stochastic processes. This study offers fresh perspectives regarding the maintenance mechanism of bacterial and fungal biodiversity in lake ecosystems, especially regarding the responses of microbial communities under identical environmental stress.IMPORTANCELake ecosystems are an important part of the freshwater ecosystem. Lake microorganisms play an important role in material circulation and energy flow owing to their unique enzymatic and metabolic capacity. In this study, we observed that bacterial and fungal communities varied widely in the water and sediments of Hulun Lake. The primary factor affecting their formation was identified as dispersal limitation during stochastic processes. Environmental and geographical factors accounted for <20% of the variation in bacterial and fungal communities, with pH, temperature, and dissolved oxygen being important environmental factors. Our findings provide new insights into the responses of bacteria and fungi to the environment, shed light on the ecological processes of community building, and deepen our understanding of lake ecosystems. The results of this study provide a reference for lake management and conservation, particularly with respect to monitoring and understanding microbial communities in response to environmental changes.

Distribution of polysaccharidic and proteinaceous gel−like particles in three cyclonic eddies in the Eastern Tropical North Atlantic

Transparent exopolymer particles (TEP) and Coomassie stainable particles (CSP), two prominent classes of gel−like particles in the ocean primarily produced by phytoplankton, play crucial roles in ecological and biogeochemical processes, influencing microbial nutrition, growth, and particle aggregation. The distribution of these particles is intricately linked to the spatiotemporal dynamics of phytoplankton. Mesoscale cyclonic eddies (CEs) are known to stimulate phytoplankton growth and influence particle transport, but their effects on TEP and CSP remain to be determined. In the Eastern Tropical North Atlantic (ETNA), we examined three CEs: one off the Mauritanian coast during summer (Mau), one offshore during winter (Sal), and another near Brava island during winter. Mau and Brava CEs were in their intensification/maturity phase, while the Sal CE was in its decay phase. Both TEP and CSP concentrations correlated with primary productivity, but TEP increased with chlorophyll−a concentration, whereas elevated CSP coincided also with the highest abundance of pico−nanophytoplankton (&amp;lt;20 µm), mainly Synechococcus. Both gels exhibited a positive correlation with bacterial biomass production, indicating their consumption by heterotrophic bacteria. TEP total area in the epipelagic waters of all CEs (Mau, Brava, and Sal) was elevated compared to surrounding waters, with on average 4, 2.5, and 1.6−fold higher values, respectively. However, no significant difference in TEP size distribution was observed within any CEs and their surroundings. Similarly, CSP total area increased in the epipelagic waters of Mau and Brava CEs, with on average 5 and 2.4−fold higher values, respectively, compared to surrounding waters. CSP particles were notably larger in these two eddies, while the Sal CE showed no significant difference from surrounding waters in CSP abundance and size. Overall, TEP and CSP exhibited distinct responses to CEs, with increased concentrations during their intensification/maturation stage and remineralization dominating during their decaying stage.

Contribution of host species and pathogen clade to snake fungal disease hotspots in Europe

Infectious diseases are influenced by interactions between host and pathogen, and the number of infected hosts is rarely homogenous across the landscape. Areas with elevated pathogen prevalence can maintain a high force of infection and may indicate areas with disease impacts on host populations. However, isolating the ecological processes that result in increases in infection prevalence and intensity remains a challenge. Here we elucidate the contribution of pathogen clade and host species in disease hotspots caused by Ophidiomyces ophidiicola, the pathogen responsible for snake fungal disease, in 21 species of snakes infected with multiple pathogen strains across 10 countries in Europe. We found isolated areas of disease hotspots in a landscape where infections were otherwise low. O. ophidiicola clade had important effects on transmission, and areas with multiple pathogen clades had higher host infection prevalence. Snake species further influenced infection, with most positive detections coming from species within the Natrix genus. Our results suggest that both host and pathogen identity are essential components contributing to increased pathogen prevalence.

1500-year reconstruction of Circumpolar Deep Water intrusion and its impact on southern elephant seal populations in King George Island, West Antarctic Peninsula

Circumpolar Deep Water (CDW) intrusion onto the continental shelf significantly affects basal melting of ice shelves, oceanographic and ecological processes in the West Antarctic Peninsula (WAP). Understanding the changes in CDW upwelling and its impacts on marine ecology during historical periods is urgent. Here, we presented a new reconstruction for the variability in CDW intrusion onto the WAP over the past 1500 years by using the cadmium (Cd) concentrations in southern elephant seal hairs collected from King George Island. In addition, multi-proxies including the abundance of seal hairs and TOC, TN, LOI, and bio-elements in the sediments were integrated to infer historical seal populations by using the Generalized Additive Models (GAMs). The overall trend of Cd concentrations was well consistent with those of primary productivity and sea ice, reflecting the contribution of CDW on regional oceanic environment and ecology. Notably, during a period of ∼900–500 yr BP, enhanced CDW intrusion allowed for increased regional marine productivity and decreased sea ice, and ultimately promoting an increase in seal populations. Enhanced CDW intrusion was possibly driven by southward shift and intensification of the Southern Hemisphere westerly wind. These results indicated that large-scale atmospheric circulation patterns were coupled with regional oceanic circulation and ecological processes of the Southern Ocean.

Bears into the Niche-Space: Phylogeography and Phyloclimatic Model of the Family Ursidae

Assessing niche evolution remains an open question and an actively developing area of study. The family Ursidae consists of eight extant species for which, despite being the most studied family of carnivores, little is known about the influence of climate on their evolutionary history and diversification. We evaluated their evolutionary patterns based on a combined phylogeography and niche modeling approach. We used complete mitogenomes, estimated divergence times, generated ecological niche models and applied a phyloclimatic model to determine the species evolutionary and diversification patterns associated with their respective environmental niches. We inferred the family evolutionary path along the environmental conditions of maximum temperature and minimum precipitation, from around 20 million years ago to the present. Our findings show that the phyloclimatic niches of the bear species occupy most of the environmental space available on the planet, except for the most extreme warm conditions, in accordance with the wide geographic distribution of Ursidae. Moreover, some species exhibit broader environmental niches than others, and in some cases, they explore precipitation axes more extensively than temperature axes or vice versa, suggesting that not all species are equally adaptable to these variables. We were able to elucidate potential patterns of niche conservatism and evolution, as well as niche overlapping, suggesting interspecific competitive exclusion between some of the bear species. We present valuable insights into the ecological and evolutionary processes driving the diversification and distribution of the Ursidae. Our approach also provides essential information for guiding effective conservation strategies, particularly in terms of distribution limits in the face of climate change.

Anassessment of the state of conservation planning in Europe.

Expanding and managing current habitat and species protection measures is at the heart of the European biodiversity strategy. A structured approachis needed to gain insights into such issues is systematic conservation planning, which uses techniques from decision theory to identify places and actions that contribute most effectively to policy objectives given a set of constraints. Yet culturally and historically determined European landscapes make the implementation of any conservation plans challenging, requiring an analysis of synergies and trade-offs before implementation. In this work, we review the scientific literature for evidence of previous conservation planning approaches, highlighting recent advances and success stories. We find that the conceptual characteristics of European conservation planning studies likely reduced their potential in contributing to better-informed decisions. We outline pathways towards improving the uptake of decision theory and multi-criteria conservation planning at various scales, particularly highlighting the need for (a) open data and intuitive tools, (b) the integration of biodiversity-focused conservation planning with multiple objectives, (c)accounting of dynamic ecological processes and functions, and (d)better facilitation of entry-points and co-design practices of conservation planning scenarios with stakeholders. By adopting and improving these practices, European conservation planning might become more actionable and adaptable towards implementable policy outcomes. This article is part of the theme issue 'Ecological novelty and planetary stewardship: biodiversity dynamics in a transforming biosphere'.

Litterfall-Associated Carbon Deposition and Vertical Profiles of Soil Organic Carbon in Different Land-Use Systems

Litterfall is one of the major inputs for soil nutrients. Understanding the connection of litterfall and soil organic carbon (SOC) as the part of ecological processes is a key step towards carbon sequestration as a climate change mitigation strategy. Yet, it remains inadequate to support by empirical pieces of evidence particularly in tropical ecosystems. In this study, litter traps were used to monitor the monthly organic carbon deposition over a year through litterfall, and soil samples were collected vertically up to 30 cm depth to define the SOC depth distribution in three different land use types located at Wondo Genet district, southern Ethiopia. The results were interpreted by deploying both the carbon stratification ratio (CSR) and carbon flow balance ratio (CFBR) as ecological indicators. The results revealed that both the annual litterfall amount and associated organic carbon input in plantation forest (958.4 ± 112 g·m−2·yr−1; 391.4 ± 112 g·C·m−2·yr−1) were higher than those in the homegarden (183.5.4 ± 26 g·m−2·yr−1; 67.4 ± 10 g·C·m−2·yr−1), conceivably due to few litter contributors (trees) present in the homegarden. The CSR of the homegarden (1.3 ± 0.01) was found between the ratio obtained for crop (1.2 ± 0.01) and plantation forest (1.4 ± 0.01), indicating that it is definitely a combination of pure plantation forest and crop system. The CFBR was higher in plantation forest (3.4 yr−1) than in soil of homegarden (0.77 yr−1), implying the net accumulation of soil carbon over time in the latter system. Hence, homegardens could be considered as a system of climate-smart practice with multiple-biogeochemistry pathways, which simultaneously address the social-absolute needs. Given the current tendency of transforming homegarden agroforestry to monoculture types owing to economical drivers, such indicators can dictate of making rational decisions related to land use planning and soil fertility management.

Historical Field Records Reveal Habitat as an Ecological Correlate of Locomotor Phenotypic Diversity in the Radiation of Neotropical Geophagini Fishes.

AbstractPhenotypic macroevolutionary studies provide insight into how ecological processes shape biodiversity. However, the complexity of phenotype-ecology relationships underscores the importance of also validating phenotype-based ecological inference with direct evidence of resource use. Unfortunately, macroevolutionary-scale ecological studies are often hindered by the challenges of acquiring taxonomically and spatially representative ecological data for large and widely distributed clades. The South American cichlid fish tribe Geophagini represents a continentally distributed radiation whose early locomotor morphological divergence suggests habitat as one ecological correlate of diversification, but an association between locomotor traits and habitat preference has not been corroborated. Field notes accumulated over decades of collecting across South America provide firsthand environmental records that can be mined for habitat data in support of macroevolutionary ecological research. In this study, we applied a newly developed method to transform descriptive field note information into quantitative habitat data and used it to assess habitat preference and its relationship to locomotor morphology in Geophagini. Field note-derived data shed light on geophagine habitat use patterns and reinforced habitat as an ecological correlate of locomotor morphological diversity. Our work emphasizes the rich data potential of museum collections, including often-overlooked material such as field notes, for evolutionary and ecological research.

Explaining variation in stream fish productivity with biotic and abiotic variables across wadeable rivers in eastern North America

Abstract Biomass production is a key ecosystem process that provides insight into ecological processes such as growth, reproduction, mortality, and energy distribution. Previous studies have considered various fish response measures such as species richness, abundance, and/or biomass as response variables for river ecosystems or the productivity of particular species. However, few studies have investigated how total fish productivity of riverine systems is affected by environmental variables. Here, we identified important abiotic and biotic predictors of fish productivity in wadeable, temperate riverine systems. We investigated the relationships between total stream fish productivity and multiple abiotic and biotic variables in wadeable stream reaches across Ontario, Canada. Variance partitioning was used to evaluate the relative importance of the biotic, landscape, climatic, and geologic variables on total stream fish productivity. A modified bootstrap approach was used for the model‐selection process and to parameterise an empirical fish productivity model. We found that biotic predictors explained more variation in productivity relative to the abiotic variables. The best empirical model included day‐of‐year, growing degree days, latitude, salmonid presence/absence, species richness, and upstream catchment area. Our findings indicate that a combination of both biotic and abiotic variables can provide valuable insight into how ecological processes, such as fish productivity, differ across ecosystems. Species richness and differences in assemblage characteristics may be key determinants of the overall fish productivity in stream systems. Our model can estimate productivity from salmonid presence/absence data and total species richness, instead of fish abundance data, which require larger sampling efforts.

Seed germination and seedling growth response of Leymus chinensis to the allelopathic influence of grassland plants.

Allelopathy has a profound impact on the germination and growth of plants, influencing the establishment of plant populations and shaping community ecological patterns. However, the allelopathic potential of many grassland species remains poorly understood. In this study, we prepared aqueous extracts from 17 herbaceous plants to investigate their allelopathic effects on the seed germination and seedling growth of Leymus chinensis, a dominant grassland species. Our results revealed that the response of L. chinensis to allelopathic compounds was dependent on the specific plant species, extract concentration, and target plant organ. Notably, Fabaceae plants exhibited a stronger allelopathic potential than Poaceae, Asteraceae, and other plant families. Moreover, we observed that root growth of L. chinensis was more sensitive to allelopathy than shoot growth, and seed germination was more affected than seedling growth. Generally, the germination of L. chinensis was strongly inhibited as the donor plant extract concentration increased. The leachate of Fabaceae plants inhibited the seedling growth of L. chinensis at concentrations ranging from 0.025 to 0.1 g mL-1. On the other hand, the leachate from other families' plants exhibited either inhibitory or hormetic effects on the early growth of L. chinensis, promoting growth at 0.025 g mL-1 and hindering it at concentrations between 0.05 and 0.1 g mL-1. These findings highlight the significant allelopathic potential of grassland plants, which plays a critical role in establishing plant populations and associated ecological processes. In addition, they shed light on the coexistence of other plants with dominant plants in the community.

Disturbance intensity shapes the soil micro-food web compositions and energy fluxes during seven-year land use changes

Soil micro-food webs play an important role in ecosystem functions through energy flow; they are strongly influenced by land use types. Previous studies have typically utilized the space-for-time substitution or single-time sampling method to reflect the land-use change effects by comparing differences among existing land-use types. These methods would increase random error. Research on how synchronized land-use change (starting at the same time and place) influences soil ecological processes and functions is urgently needed. Based on a controlled field experiment and seven years of observations, this study explored the effects of land-use change from natural shrubland to cropland (maize), forage land (tall-grass forage), and economic forest land (walnut plantation) on the community structure and energy dynamics of the soil micro-food webs. Cropland simplified the complexity of the soil food webs compared to the other three land-uses. Forage grassland maintained the highest biomasses of soil total microbes, fungi, and arbuscular mycorrhizal fungi. In addition, economic forest land improved the flow uniformity of the micro-food web by increasing energy transfer from resources to bacterivores, fungivores, and herbivores while decreasing herbivore energy flow to omnivores-predators. Omnivore abundance and nematode diversity were important predictors of total energy flux and flow uniformity of the soil micro-food webs, respectively. In addition, omnivores maintained the complexity of soil micro-food webs by promoting interactions among trophic groups through top-down control. Soil organisms are sensitive to the response of agricultural management and planting time, and it may take several years or more to reach a dynamic equilibrium. Different types and levels of ecosystem disturbance (e.g., tillage and no-tillage, fertilizer rates, aboveground biomass removal intensity) may be the major drivers of soil community during land use change. Our findings highlight the importance of conservation agriculture in maintaining soil food web structure and energy flow for future sustainable land uses, and that promoting omnivore abundance is essential for food web complexity and stability.

Dynamics and drivers of mycorrhizal fungi after glacier retreat.

The development of terrestrial ecosystems depends greatly on plant mutualists such as mycorrhizal fungi. The global retreat of glaciers exposes nutrient-poor substrates in extreme environments and provides a unique opportunity to study early successions of mycorrhizal fungi by assessing their dynamics and drivers. We combined environmental DNA metabarcoding and measurements of local conditions to assess the succession of mycorrhizal communities during soil development in 46 glacier forelands around the globe, testing whether dynamics and drivers differ between mycorrhizal types. Mycorrhizal fungi colonized deglaciated areas very quickly (< 10 yr), with arbuscular mycorrhizal fungi tending to become more diverse through time compared to ectomycorrhizal fungi. Both alpha- and beta-diversity of arbuscular mycorrhizal fungi were significantly related to time since glacier retreat and plant communities, while microclimate and primary productivity were more important for ectomycorrhizal fungi. The richness and composition of mycorrhizal communities were also significantly explained by soil chemistry, highlighting the importance of microhabitat for community dynamics. The acceleration of ice melt and the modifications of microclimate forecasted by climate change scenarios are expected to impact the diversity of mycorrhizal partners. These changes could alter the interactions underlying biotic colonization and belowground-aboveground linkages, with multifaceted impacts on soil development and associated ecological processes.

Multilayer diffusion networks as a tool to assess the structure and functioning of fine grain sub‐specific plant–pollinator networks

Interaction networks are a widely used tool to understand the dynamics of plant–pollinator ecological communities. However, while most mutualistic networks have been defined at the species level, ecological processes such as pollination take place at different scales, including the individual or patch levels. Yet, current approaches studying fine‐grain sub‐specific plant–pollinator networks only account for interactions among nodes belonging to a single plant species due to the conceptual and mathematical limitations of modeling simultaneously several plant species each composed of several nodes. Here, we introduce a multilayer diffusion network framework that allows modeling simple diffusion processes between nodes pertaining to the same or different layers (i.e. species). It is designed to depict from the network structure the potential conspecific and heterospecific pollen flows among plant individuals or patches. This potential pollen flow is modeled as a transport‐like system, in which pollen grain movements are represented as random‐walkers that diffuse on an ensemble of bipartite layers of conspecific plants and their shared pollinators. We exemplify this physical conceptualization using a dataset of nine fine‐grain sub‐specific plant–pollinator networks from a Mediterranean grassland of annual plants, where plant nodes represent groups of conspecifics within patches of 1 m2. The diffusion networks show pollinators effectively connecting sets of patches of the same and different plant species, forming a modular structure. Interestingly, different properties of the network structure, such as the conspecific pollen arrival probability and the number of conspecific subgraphs in which plants are embedded, are critical for the seed production of different plant species. We provide a simple but robust set of metrics to calculate potential pollen flow and scale down network ecology to functioning properties at the individual or patch level, where most ecological processes take place, hence moving forward the description and interpretation of species‐rich communities across scales.