Down-regulation Of Photosynthetic Genes Research Articles

Light-dependent variations in fatty acid profiles and gene expression in Antarctic microalgal cultures.

Photosynthetic eukaryotic microalgae are key primary producers in the Antarctic sea ice environment. Anticipated changes in sea ice thickness and snow load due to climate change may cause substantial shifts in available light to these ice-associated organisms. This study used a laboratory-based experiment to investigate how light levels, simulating different sea ice and snow thicknesses, affect fatty acid (FA) composition in two ice associated microalgae species, the pennate diatom Nitzschia cf. biundulata and the dinoflagellate Polarella glacialis. FA profiling and transcriptomic analyses were used to compare the impact of three light levels: High (baseline culturing conditions 90 ± 1 μmol photons m-2 s-1), mid (10 ± 1 μmol photons m-2 s-1); and low (1.5 ± 1 μmol photons m-2 s-1) on each isolate. Both microalgal isolates had altered growth rates and shifts in FA composition under different light conditions. Nitzschia cf. biundulata exhibited significant changes in specific saturated and monounsaturated FAs, with a notable increase in energy storage-related FAs under conditions emulating thinner ice or reduced snow cover. Polarella glacialis significantly increased production of polyunsaturated FAs (PUFAs) in mid light conditions, particularly octadecapentaenoic acid (C18:5N-3), indicating enhanced membrane fluidity and synthesis of longer-chain PUFAs. Notably, C18:5N-3 has been identified as an ichthyotoxic molecule, with fish mortalities associated with other high producing marine taxa. High light levels caused down regulation of photosynthetic genes in N. cf. biundulata isolates and up-regulation in P. glacialis isolates. This and the FA composition changes show the variability of acclimation strategies for different taxonomic groups, providing insights into the responses of microalgae to light stress. This variability could impact polar food webs under climate change, particularly through changes in macronutrient availability to higher trophic levels due to species specific acclimation responses. Further research on the broader microalgal community is needed to clarify the extent of these effects.

Arabidopsis Phototropins Participate in the Regulation of Dark-Induced Leaf Senescence.

Senescence is the final stage of plant development, affecting individual organs or the whole organism, and it can be induced by several environmental factors, including shading or darkness. Although inevitable, senescence is a complex and tightly regulated process, ensuring optimal remobilization of nutrients and cellular components from senescing organs. Photoreceptors such as phytochromes and cryptochromes are known to participate in the process of senescence, but the involvement of phototropins has not been studied to date. We investigated the role of these blue light photoreceptors in the senescence of individually darkened Arabidopsis thaliana leaves. We compared several physiological and molecular senescence markers in darkened leaves of wild-type plants and phototropin mutants (phot1, phot2, and phot1phot2). In general, all the symptoms of senescence (lower photochemical activity of photosystem II, photosynthetic pigment degradation, down-regulation of photosynthetic genes, and up-regulation of senescence-associated genes) were less pronounced in phot1phot2, as compared to the wild type, and some also in one of the single mutants, indicating delayed senescence. This points to different mechanisms of phototropin operation in the regulation of senescence-associated processes, either with both photoreceptors acting redundantly, or only one of them, phot1, playing a dominant role.

A role of age-dependent DNA methylation reprogramming in regulating the regeneration capacity of Boea hygrometrica leaves.

Plants can regenerate new individuals under appropriate culture conditions. Although the molecular basis of shoot regeneration has steadily been unraveled, the role of age-dependent DNA methylation status in the regulation of explant regeneration remains practically unknown. Here, we established an effective auxin/cytokinin-induced shoot regeneration system for the resurrection plant Boea hygrometrica via direct organogenesis and observed that regeneration was postponed with increasing age of donor plants. Global transcriptome analysis revealed significant upregulation of genes required for hormone signaling and phenylpropanoid biosynthesis and downregulation of photosynthetic genes during regeneration. Transcriptional changes in the positive/negative regulators and cell wall-related proteins involved in plant regeneration, such as ELONGATED HYPOCOTYL5 (HY5), LATERAL ORGAN BOUNDARIES DOMAIN, SHOOT-MERISTEMLESS, and WUSCHEL, were associated with the regeneration process. Comparison of DNA methylation profiling between leaves from young seedlings (YL) and mature plants (ML) revealed increased asymmetrical methylation in ML, which was predominantly distributed in promoter regions of genes, such as HY5 and a member of ABA-responsive element (ABRE) binding protein/ABRE binding factor, as well as genes encoding glycine-rich cell wall structural protein, CENTRORADIALIS-like protein, and beta-glucosidase 40-like essential for shoot meristem and cell wall architecture. Their opposite transcription response in ML explants during regeneration compared with those from YL demonstrated the putative involvement of DNA methylation in regeneration. Moreover, a significant lower expression of DNA glycosylase-lyase required for DNA demethylation in ML was coincident with its postponed regeneration compared with those in YL. Taken together, our results suggest a role of promoter demethylation in B. hygrometrica regeneration.

Leaf senescence: an overview

Senescence constitutes the last phase of plant growth and is characterized by a series of degenerative events that decrease metabolic activities and cause the death of cells, tissues and organs. Yellowing of leaves is a morphological indicator of senescence, which results due to loss of green pigments, i.e., chlorophylls. Alteration in mitochondrial and thylakoid structure, shrinkage of chloroplast and nucleus are prominent effects observed during senescence. Essential macromolecules like carbohydrates, proteins, lipids, nucleic acids, and photosynthetic pigments such as chlorophyll and carotenoids are degraded during senescence and these degraded constituents play important role in nutrient recycling mechanisms, which are mediated by senescence associated genes (SAGs). Sugar senescing mechanism, down regulation of photosynthetic genes, phytohormones, reactive oxygen species and SAGs play important role in signal transduction pathways to initiate progress and terminate the senescence process. The levels of heavy metals have increased in the environment due to various anthropogenic activities, which produce phytotoxic effects and reduce productivities. This review paper describes various biochemical/metabolic changes associated with leaf senescence.

Infection with virulent and avirulent P. syringae strains differentially affects photosynthesis and sink metabolism in Arabidopsis leaves

Infection of plants with pathogens leads not only to the induction of defence reactions but also to changes in carbohydrate metabolism. In this study, the effects of infection by a virulent and an avirulent strain of P. syringae on spatio-temporal changes in photosynthesis were compared using chlorophyll fluorescence imaging. The maximum PSII quantum yield, effective PSII quantum yield and nonphotochemical quenching were decreased in Arabidopsis leaves infected with either strain. At the same time, the quantum yield of nonregulated energy dissipation was increased. These changes could be detected by chlorophyll fluorescence imaging before symptoms were visible by eye. The effects were restricted to the vicinity of the infection site and did not spread to uninfected areas of the leaf. Qualitatively similar changes in photosynthetic parameters were observed in both interactions. Major differences between the responses to both strains were evident in the onset and time course of changes. A decrease in photosynthesis was detectable already at 3 h only after challenge with the avirulent strain while after 48 h the rate of photosynthesis was lower with the virulent strain. In contrast to photosynthesis, the regulation of marker genes for source/sink relations and the activities of invertase isoenzymes showed qualitative differences between both interactions. Inoculation of the virulent but not the avirulent strain resulted in downregulation of photosynthetic genes and upregulation of vacuolar invertases. The activity of vacuolar invertases transiently increased upon infection with the virulent strain but decreased with the avirulent strain while extracellular invertase activity was downregulated in both interactions.