Life History Variation Research Articles

Accounting for spatiotemporal sampling variation in joint species distribution models

Abstract Estimating relative abundance is critical for informing conservation and management efforts and for making inferences about the effects of environmental change on populations. Freshwater fisheries span large geographic regions, occupy diverse habitats and consist of varying species assemblages. Monitoring schemes used to sample these diverse populations often result in populations being sampled at different times and under different environmental conditions. Varying sampling conditions can bias estimates of abundance when compared across time, location and species, and properly accounting for these biases is critical for making inferences. We develop a joint species distribution model (JSDM) that accounts for varying sampling conditions due to the environment and time of sampling when estimating relative abundance. The novelty of our JSDM is that we explicitly model sampling effort as the product of known quantities based on time and gear type and an unknown functional relationship to capture seasonal variation in species life history. We use the model to study relative abundance of six freshwater fish species across the state of Minnesota, USA. Our model enables estimates of relative abundance to be compared both within and across species and lakes, and captures the inconsistent sampling present in the data. We discuss how gear type, water temperature and day of the year impact catchability for each species at the lake level and throughout a year. We compare our estimates of relative abundance to those obtained from a model that assumes constant catchability to highlight important differences within and across lakes and species. Synthesis and applications: Our method illustrates that assumptions relating indices of abundance to observed catch data can greatly impact model inferences derived from JSDMs. Specifically, not accounting for varying sampling conditions can bias inference of relative abundance, restricting our ability to detect responses to management interventions and environmental change. While our focus is on freshwater fisheries, this model architecture can be adopted to other systems where catchability may vary as a function of space, time and species.

Age Structure and Body Size of the Plateau Brown Frog (Rana kukunoris) in the Jiuzhaigou National Nature Reserve and Potential Climatic Impacts on Its Life History Variations

Jiuzhaigou National Nature Reserve (JNNR) is a renowned World Biosphere Reserve and UNESCO-designated World Nature Heritage Site. The age structure and body size of a population are crucial for assessing the quality of habitats in which a population lives and are essential for the vertebrate conservation and management, especially for amphibians. Unfortunately, information about the life history traits of amphibians is currently unavailable in JNNR. Herein, we first estimated the age structure and body size of Rana kukunoris, which is endemic to the Eastern Qinghai-Xizang Plateau. Then, we compared our data with 28 reported populations along an elevation gradient (1797–3450 m) and investigated how life history traits respond to climatic variations. Our results indicated the following: (1) For individuals from JNNR, the maximum longevity is 8 years, age at sexual maturity (ASM) is 2 years, suggesting a favorable ecological environment in JNNR. Notably, females are significantly larger than males due to the age factor. (2) The average age and ASM show a positive correlation with elevation. However, when the elevation exceeds 3000 m, the average SVL initially increases and then decreases due to the harsh environmental conditions at higher elevation. (3) Temperature and/or UV-B have a significant impact on the average age, ASM, and average SVL variations of R. kukunoris, suggesting adaptive potential of this species via life history variations in light of environmental changes. These accounts provide antecedent information about the life history traits of amphibians in JNNR, and provide insights into the driving factors of the life history variations of the plateau brown frog.

Predation risk drives long-term shifts in migratory behaviour and demography in a large herbivore population.

Migration is an adaptive life-history strategy across taxa that helps individuals maximise fitness by obtaining forage and avoiding predation risk. The mechanisms driving migratory changes are poorly understood, and links between migratory behaviour, space use, and demographic consequences are rare. Here, we use a nearly 20-year record of individual-based monitoring of a large herbivore, elk (Cervus canadensis) to test hypotheses for changing patterns of migration in and adjacent to a large protected area in Banff National Park (BNP), Canada. We test whether bottom-up (forage quality) or top-down (predation risk) factors explained trends in (i) the proportion of individuals using 5 different migratory tactics, (ii) differences in survival rates of migratory tactics during migration and whilst on summer ranges, (iii) cause-specific mortality by wolves and grizzly bears, and (iv) population abundance. We found dramatic shifts in migration consistent with behavioural plasticity in individual choice of annual migratory routes. Shifts were inconsistent with exposure to the bottom-up benefits of migration. Instead, exposure to landscape gradients in predation risk caused by exploitation outside the protected area drove migratory shifts. Carnivore exploitation outside the protected area led to higher survival rates for female elk remaining resident or migrating outside the protected area. Cause-specific mortality aligned with exposure to predation risk along migratory routes and summer ranges. Wolf predation risk was higher on migratory routes than summer ranges of montane-migrant tactics, but wolf predation risk traded-off with heightened risk from grizzly bears on summer ranges. A novel eastern migrant tactic emerged following a large forest fire that enhanced forage in an area with lower predation risk outside of the protected area. The changes in migratory behaviour translated to population abundance, where abundance of the montane-migratory tactics declined over time. The presence of diverse migratory life histories maintained a higher total population abundance than would have been the case with only one migratory tactic in the population. Our study demonstrates the complex ways in which migratory populations change over time through behavioural plasticity and associated demographic consequences because of individuals balancing predation risk and forage trade-offs.

Life cycles and larval and pupal habitats of eleven Japanese Rhyacophila (Trichoptera) species at the mountain streams in central Honshu

The life cycles and microhabitats involved in aquatic stages of eleven Rhyacophila Stephens, 1836 species living in two neighboring Japanese mountain streams in Nara Prefecture, central Honshu, were investigated. Eight species had univoltine life cycles; seven species had spring to early summer emergence seasons. One species had an autumnal emergence. Four univoltine species had periods where no larvae or pupae were collected in aquatic stages, possibly a period of egg diapause. Three species had bivoltine life cycles, with early summer and autumn emergence seasons. Rhyacophila nipponica Iwata, 1927, R. manuleata AV Martynov, 1934, and R. shikotsuensis Iwata, 1927, in the nigrocephala species group Ross, 1956, have larvae which spend most of their larval stage in the hyporheos. The larvae of R. transquilla Tsuda, 1940, also inhabit the hyporheic zone, although the vertical microhabitat used by this species differed from the former three species. All four of these species have hyporheic larval stages, but in these species the first and final instar larvae reside on the surfaces of cobbles. The first instar larvae seem to live on stone surfaces immediately after hatching, and subsequently move to the interstices of sand. Final instar larvae live in the interstices of sandy bottom, and move to stone surfaces for pupation. Eleven species of the genus Rhyacophila had diverse life histories, microhabitat preferences, and experienced differing water temperature regimes during larval stages at the sites. Life history and habitat preference variation enhances the species richness of the genus and coexistence of species in upper stream of the Kinokawa River.

Phylogeny, Ecology, and Gene Families Covariation Shaped the Olfactory Subgenome of Rodents.

Olfactory receptor (OR) genes represent the largest multigenic family in mammalian genomes and encode proteins that bind environmental odorant molecules. The OR repertoire is extremely variable among species and is subject to many gene duplications and losses, which have been linked to ecological adaptations in mammals. Although they have been studied on a broad taxonomic scale (i.e., placental), finer sampling has rarely been explored in order to better capture the mechanisms that drove the evolution of the OR repertoire. Among placental mammals, rodents are well-suited for this task, as they exhibit diverse life history traits, and genomic data are available for most major families and a diverse array of lifestyles. In this study, 53 rodent published genomes were mined for their OR subgenomes. We retrieved more than 85,000 functional and pseudogene OR sequences that were subsequently classified into phylogenetic clusters. Copy number variation among rodents is similar to that of other mammals. Using our OR counts along with comparative phylogenetic approaches, we demonstrated that ecological niches such as diet, period of activity, and a fossorial lifestyle strongly impacted the proportion of OR pseudogenes. Within the OR subgenome, phylogenetic inertia was the main factor explaining the relative variations of the 13 OR gene families. However, a striking exception was a convergent 10-fold expansion of the OR family 14 among the phylogenetically divergent subterranean mole-rat lineages belonging to Bathyergidae and Spalacidae families. This study illustrates how the diversity of the OR repertoire has evolved among rodents, both shaped by selective forces stemming from species life history traits and neutral evolution along the rodent phylogeny.

The genetic basis of traits associated with the evolution of serpentine endemism in monkeyflowers.

The floras on chemically and physically challenging soils, such as gypsum, shale, and serpentine, are characterized by narrowly endemic species. The evolution of edaphic endemics may be facilitated or constrained by genetic correlations among traits contributing to adaptation and reproductive isolation across soil boundaries. The yellow monkeyflowers in the Mimulus guttatus species complex are an ideal system in which to examine these evolutionary patterns. To determine the genetic basis of adaptive and prezygotic isolating traits, we performed genetic mapping experiments with F2 hybrids derived from a cross between a serpentine endemic, M. nudatus, and its close relative M. guttatus. Few large effect and many small effect QTL contribute to interspecific divergence in life history, floral, and leaf traits, and a history of directional selection contributed to trait divergence. Loci contributing to adaptive traits and prezygotic reproductive isolation overlap, and their allelic effects are largely in the direction of species divergence. These loci contain promising candidate genes regulating flowering time and plant organ size. Together, our results suggest that genetic correlations among traits can facilitate the evolution of adaptation and speciation and may be a common feature of the genetic architecture of divergence between edaphic endemics and their widespread relatives.

Genetic assignment predicts depth of benthic settlement for 0-group Atlantic cod.

Atlantic cod is a keystone species that remains among the most economically important demersal fish in the North Atlantic. Throughout its distribution range, Atlantic cod is composed of populations with varying environmental preferences and migratory propensities. This life-history variation is likely to have contributed to the niche width and large population sizes of Atlantic cod, and its relative resilience to environmental change and exploitation. The Icelandic cod stock is currently managed as a single unit, but early research indicates population variation by depth and temperature and distinct offshore and inshore spawning components. Pelagic 0-group juveniles from different spawning grounds coexist in nursery areas around Iceland, but their genetic composition or habitat partitioning had not been examined post benthic settlement. In the current study we examine the genetic composition of Atlantic cod juvenile aggregations at nearshore nursery grounds in NW-Iceland and report distinct segregation by the depth of offshore and inshore juvenile cod. The physiological mechanism of this segregation is not known, but the pattern demonstrates the need to consider population structure at nursery grounds in the application of marine spatial planning and other area-based conservation tools.

Improving the biological realism of predator-prey size relationships in food web models alters ecosystem dynamics.

Body-size relationships between predators and prey exhibit remarkable diversity. However, the assumption that predators typically consume proportionally smaller prey often underlies size-dependent predation in ecosystem models. In reality, some animals can consume larger prey or exhibit limited changes in prey size as they grow larger themselves. These distinct predator-prey size relationships challenge the conventional assumptions of traditional size-based models. Cephalopods, with their diverse feeding behaviours and life histories, offer an excellent case study to investigate the impact of greater biological realism in predator-prey size relationships on energy flow within a size-structured ecosystem model. By categorizing cephalopods into high and low-activity groups, in line with empirically derived, distinct predator-prey size relationships, we found that incorporating greater biological realism in size-based feeding reduced ecosystem biomass and production, while simultaneously increasing biomass stability and turnover. Our results have broad implications for ecosystem modelling, since distinct predator-prey size relationships extend beyond cephalopods, encompassing a wide array of major taxonomic groups from filter-feeding fishes to baleen whales. Incorporating a diversity of size-based feeding in food web models can enhance their ecological and predictive accuracy when studying ecosystem dynamics.

Genetic Diversity in Pioneer Ants: The Cardiocondyla shuckardi Group

The myrmicine ant genus Cardiocondyla consists of around 80 species of small, inconspicuous ants, which live mainly in subtropical and tropical Africa, Eurasia, and Australia. Several species have been accidentally introduced to America and have also invaded numerous originally ant-free islands around the world. The diversity of life histories in this genus, with lethally fighting wingless males, dominance hierarchies among queens, and considerable variation in the sociogenetic organization of colonies across species, has made it an interesting model to investigate the evolution and behavioral ecology of reproductive strategies. Taxa of the African Cardiocondyla shuckardi group are of particular interest, as in a phylogeny they lie between facultatively polygynous species with fatal male competition and monogynous species with mutually tolerant males. Studies on male behavior and sociogenetics in C. “venustula,” a widespread member of the C. shuckardi group, showed that males defend small territories inside their subterraneous nests. At the same time, they revealed a surprisingly large variability in mtDNA haplotypes both within and between populations in South Africa, Angola, and Côte d’Ivoire. As the different lineages are very similar in morphology and nuclear markers, more research is needed to clarify the very confused taxonomic situation in this fascinating group of ants.

The Hidden Secrets of Psylloidea: Biology, Behavior, Symbionts, and Ecology.

Psyllids constitute a diverse group of sap-feeding Sternorrhyncha that were relatively obscure until it was discovered that a handful of species transmit bacterial plant pathogens. Yet the superfamily Psylloidea is much richer than the sum of its crop-associated vectors, with over 4,000 described species exhibiting diverse life histories and host exploitation strategies. A growing body of research is uncovering fascinating insights into psyllid evolution, biology, behavior, and species interactions. This work has revealed commonalities and differences with better-studied Sternorrhyncha, as well as unique evolutionary patterns of lineage divergence and host use. We are also learning how psyllid evolution and foraging ecology underlie life history traits and the roles of psyllids in communities. At finer scales, we are untangling the web of symbionts across the psyllid family tree, linking symbiont and psyllid lineages, and revealing mechanisms underlying reciprocal exchange between symbiont and host. In this review, we synthesize and summarize key advances within these areas with a focus on free-living (nongalling) Psylloidea.

Balanophora genomes display massively convergent evolution with other extreme holoparasites and provide novel insights into parasite-host interactions.

Parasitic plants have evolved to be subtly or severely dependent on host plants to complete their life cycle. To provide new insights into the biology of parasitic plants in general, we assembled genomes for members of the sandalwood order Santalales, including a stem hemiparasite (Scurrula) and two highly modified root holoparasites (Balanophora) that possess chimaeric host-parasite tubers. Comprehensive genome comparisons reveal that hemiparasitic Scurrula has experienced a relatively minor degree of gene loss compared with autotrophic plants, consistent with its moderate degree of parasitism. Nonetheless, patterns of gene loss appear to be substantially divergent across distantly related lineages of hemiparasites. In contrast, Balanophora has experienced substantial gene loss for the same sets of genes as an independently evolved holoparasite lineage, the endoparasitic Sapria (Malpighiales), and the two holoparasite lineages experienced convergent contraction of large gene families through loss of paralogues. This unprecedented convergence supports the idea that despite their extreme and strikingly divergent life histories and morphology, the evolution of these and other holoparasitic lineages can be shaped by highly predictable modes of genome reduction. We observe substantial evidence of relaxed selection in retained genes for both hemi- and holoparasitic species. Transcriptome data also document unusual and novel interactions between Balanophora and host plants at the host-parasite tuber interface tissues, with evidence of mRNA exchange, substantial and active hormone exchange and immune responses in parasite and host.

Spatial aggregation patterns in four mistletoe species: ecological and environmental determinants.

Plant spatial distribution is an important topic in ecology as it determines species coexistence and biodiversity dynamics. Usually, plants show clustered distributions in nature. Mistletoes are a good example of aggregated distributions, as they form dense aggregations due to several factors (availability of competent hosts, seed dispersal vectors, microclimate conditions). We analysed four native mistletoe species with divergent life histories and host ranges: Desmaria mutabilis and Tristerix corymbosus from the temperate rainforests of southern Chile; and Tristerix aphyllus and Tristerix verticillatus from the northern semi-desert zone. While T. corymbosus and T. verticillatus have a wide host range, T. aphyllus and D. mutabilis are specialists that can parasitize only a few plant species. We hypothesized that specialized species would be more aggregated due to ecological and environmental restrictions. We used heterogeneous Poisson models to quantify spatial aggregation. Three of the four mistletoe species were spatially clustered at both environments, with aggregation being stronger in the temperate rainforest of southern Chile and particularly in the host-specialist species. Our results suggest that environmental constraints are more important than ecological constraints (host range) in shaping mistletoe spatial structure. Mistletoe aggregated spatial distribution depends primarily on the environment that they inhabit, which conditions host spatial availability, and arrangement.

Reproductive pattern of the southern bunchgrass lizard (Sceloporus aeneus) from Cuautepec de Hinojosa, Hidalgo, Mexico

AbstractSquamata is one of the groups of sauropsids with the greatest diversity in life histories. The timing and expression of events related to reproductive phenology are considered among the most important components of squamate life histories. Here we studied the male and female reproductive patterns, clutch size, and clutch frequency of the oviparous lizard Sceloporus aeneus from a population in the southeast of Hidalgo State, Mexico, from April 2010 to March 2011. The gonadal analysis showed that the minimum snout‐vent length at sexual maturity in males and females was 46 mm. Both sexes exhibit seasonal reproductive patterns; males present maximum gonadal activity in winter‐spring (February–May), and females are vitellogenic in spring‐summer (May–July). Clutch size averaged 7 eggs (range 5–9) and did not show a relationship with female body size. Females produce at least two clutches per breeding season. The reproductive patterns described in this study were similar to those observed in other populations of S. aeneus, although some events in the reproductive phenology of both sexes appear to be related to local environmental factors.

Hedonic eating, obesity, and addiction result from increased neuropeptide Y in the nucleus accumbens during human brain evolution

The nucleus accumbens (NAc) is central to motivation and action, exhibiting one of the highest densities of neuropeptide Y (NPY) in the brain. Within the NAc, NPY plays a role in reward and is involved in emotional behavior and in increasing alcohol and drug addiction and fat intake. Here, we examined NPY innervation and neurons of the NAc in humans and other anthropoid primates in order to determine whether there are differences among these various species that would correspond to behavioral or life history variables. We quantified NPY-immunoreactive axons and neurons in the NAc of 13 primate species, including humans, great apes, and monkeys. Our data show that the human brain is unique among primates in having denser NPY innervation within the NAc, as measured by axon length density to neuron density, even after accounting for brain size. Combined with our previous finding of increased dopaminergic innervation in the same region, our results suggest that the neurochemical profile of the human NAc appears to have rendered our species uniquely susceptible to neurophysiological conditions such as addiction. The increase in NPY specific to the NAc may represent an adaptation that favors fat intake and contributes to an increased vulnerability to eating disorders, obesity, as well as alcohol and drug dependence. Along with our findings for dopamine, these deeply rooted structural attributes of the human brain are likely to have emerged early in the human clade, laying the groundwork for later brain expansion and the development of cognitive and behavioral specializations.

Timing of reproduction underlies fitness tradeoffs for a salmonid fish

Life history diversity is generated and maintained in part by density‐dependent fitness tradeoffs that inhibit a single trait value from reaching fixation. While central to our understanding of evolution, demonstrating density dependence in the strength of fitness tradeoffs is difficult in natural systems. The timing of reproduction is a key life history trait that determines access to breeding habitat and exposure of offspring to competitive interactions and environmental conditions. Understanding the processes underlying diversity in reproductive timing will aid efforts to increase adaptive capacity under global environmental change. Here, we used detailed field studies, genetic parentage assignment, and simulation modeling to evaluate the fitness tradeoffs associated with the timing of reproduction for Yellowstone cutthroat trout Oncorhynchus clarkii bouvieri in groundwater‐dominated tributaries to the upper Snake River, Wyoming, USA. We conducted our study across two years to understand how the strength of tradeoffs changes with population density. We found that early breeders experienced reduced reproductive success relative to later breeders due to the negative impact of nest superimposition (where later breeders construct nests overlapping those constructed previously) on embryo survival. However, as the risk of superimposition declined in the low‐density year and early breeders experienced fewer losses, reproductive success became more similar among individuals breeding at different times. Further, in the spring following the critical period for growth and survival, offspring of early breeders had experienced longer growing seasons, attained larger body sizes, and were equally abundant relative to those of later breeders, suggesting that fitness losses due to superimposition may be offset by size‐dependent competitive ability and overwinter survival. Our results illustrate a mechanism underlying diversity in the timing of reproduction for salmonids. This type of life history diversity will help to ensure the resilience and stability of salmonid populations attempting to adapt to changing local stressors associated with global climate change.

Intra-lake trends and inter-lake comparisons of Mysis diluviana life history variables and their relationships to food limitation

The opossum shrimp, Mysis diluviana, is an important member of the offshore food webs of the Laurentian Great Lakes, but its response to ecosystem changes that have occurred over the past several decades is not well understood. We combined the data of four long-term sampling programs, adding several years of data (post and prior) to previously published analyses to offer a longer-term, cross-basin analysis of M. diluviana populations in the Great Lakes from 1997 to 2019. Densities were high in lakes Superior and Ontario (summer values 100–300/m2), high and variable but declining (from 200–300/m2 in 1997–2004 to less than 100/m2 in 2017–2019) in Lake Michigan, low (∼20–50/m2 since 2005) in Lake Huron, and very low in shallower eastern Lake Erie (<1/m2). Biomass showed similar trends. Life history parameters (mortality, fecundity, and growth) were consistently highest in eastern Lake Erie, followed by lakes Ontario, Michigan, Huron, and Superior. Generation time was 1 year in Lake Erie and 2 years in the other lakes. Cross-basin relationships between annual M. diluviana areal densities and food indices (chlorophyll-a concentration and zooplankton biomass) were non-linear, increasing with food levels up to about 250 mysids/m2 and about 650 mg dry wt/m2. Annual growth rates were also positively correlated to both food indices in the four deep lakes, but fecundity and mortality rates were not. Our results suggest food availability is a primary factor predicting M. diluviana density and biomass. Density-dependent mortality and fish predation could explain some of the inter-lake differences, but these relationships could benefit from further investigations.

Social but not solitary bee abundance tracks pollen protein accumulation in forest canopy gaps

Abstract Forest restoration projects that create canopy gaps can promote floral diversity and may provide reservoirs for bee–flower interactions. However, periods of bee activity must match availability of floral nutrition for bees to benefit from these effects. We model variation in canopy gap size, floral density, pollen protein and bee and floral traits to test the hypothesis that patterns of floral visitation in bee–flower interactions are predicted by patch structure, variation in bee life histories and floral phenotypes. Canopy gap size did not predict overlap of foraging bee abundances and floral protein, but bee life‐history traits did. Foraging activity of large ground‐nesting bees matched accumulation of protein density, whereas activity of small cavity‐nesting bees and kleptoparasitic species preceded peak protein density. Floral visual traits predicted visitation rates, with more interactions for taller species with large floral displays. Both native and invasive species have high nutritional value for bees in canopy gaps and can support frequent and rich interactions. Landscapes with both weedy and native floral species may have higher phenological diversity and provide more foraging opportunities for early‐season bees. We conclude that canopy gap creation is likely to have similar impacts on bee–flower interactions regardless of gap size, but activity periods of larger bees are more aligned with pollen protein density than activity of small bees, and floral visual displays are decoupled from pollen protein content.

Current and Historical Genetic Variability of Native Brown Trout Populations in a Southern Alpine Ecosystem: Implications for Future Management

The highly polymorphic taxon European brown trout (genus Salmo) has high phenotypic plasticity, displaying a complex pattern of morphological and life-history variation, contributing to taxonomic confusion. Three main mitochondrial lineages (Adriatic, Mediterranean, and marmoratus) developed during the Pleistocene climatic events in the southern Alpine ecosystem. Here, the natural distribution of native brown trout S. trutta is controversial, complicated by introductions of the Atlantic strain. By investigating museum vouchers, this study aimed to retrace the historical presence of brown trout in the southern Alpine ecosystem before the beginning of mass introductions, which occurred since the middle of the 19th century. By examining the combination of historical and current genetic variability, this study aims to depict the actual impact of introductions of the introduced strain, increasing knowledge and informing conservation strategies and future management plans. The molecular approaches selected were: (i) sequencing of the mitochondrial control region and (ii) genotyping of the nuclear gene LDH-C1*. Vouchers dated the presence of the native Adriatic strain since 1821, while current genetic variability showed the widespread signature of introgression, a consequence of several decades of introductions. Focused plans to preserve local lineages are urgently needed, including short-term solution to avoid complete pauperization of this ecosystem.

Genetic monitoring of steelhead in the Klickitat River to estimate productivity, straying, and migration timing

AbstractObjectiveSalmonids with a complex life history variation present challenges for conservation management, but genetic approaches alongside fisheries monitoring can address questions regarding the viability of the natural populations.MethodsWe genotyped adult (n = 3108) and juvenile (n = 2624) samples of steelhead Oncorhynchus mykiss that were collected in the Klickitat River, Washington, USA at traps in the lower drainage to examine tributary level productivity, straying from outside sources, and variation in adult migration timing.ResultGenetic assignment of steelhead from this system indicated that the majority were produced within or near tributaries of the middle Klickitat River (juvenile mean = 72.8%; adult mean = 87.3%). Analyses with parentage‐based tagging identified that most hatchery‐origin adults were assigned to the Skamania Hatchery (80.8%), as expected, since this has been the release stock for decades within the Klickitat River drainage. Hatchery‐origin adults were also identified from programs operating outside the Klickitat River, which were primarily strays from Snake River hatcheries. Most natural‐origin steelhead were assigned to the Klickitat River, but there were also natural‐origin fish identified as strays from other regions of the Columbia River (22.3% of natural returns). We also examined genes known to be associated with migration timing in adult steelhead observed at the trap and observed a strong relationship between migration date and alleles for early and late migration, but individual outliers were detected across seasons.ConclusionOur results indicate that genetic variation of steelhead in the Klickitat River has been influenced by hatchery programs as well as natural‐origin straying from other subbasins, but genetic diversity remains high throughout the subbasin, and both early and late migration alleles are maintained. The genetic diversity present in Klickitat River steelhead may enable this Endangered Species Act listed (threatened) species to better adapt to stochastic environmental conditions compared to less diverse populations.

Individual Quality Drives Life History Variation in a Long-Lived Marine Predator.

AbstractIndividual quality and environmental conditions may mask or interact with energetic trade-offs in life history evolution. Deconstructing these sources of variation is especially difficult in long-lived species that are rarely observed on timescales long enough to disentangle these effects. Here, we investigated relative support for variation in female quality and costs of reproduction as factors shaping differences in life history trajectories using a 32-year dataset of repeated reproductive measurements from 273 marked, known-age female gray seals (Halichoerus grypus). We defined individual reproductive investment using two traits, reproductive frequency (a female's probability of breeding) and provisioning performance (offspring weaning mass). Fitted hierarchical Bayesian models identified individual investment relative to conspecifics (over a female's entire life and in three age classes) and subsequently estimated how these investment metrics and the Atlantic Multidecadal Oscillation are associated with longevity. Individual differences (i.e., quality) contributed a large portion of the variance in reproductive traits. Females that consistently invest well in their offspring relative to other females survive longer. The best-supported model estimated survival as a function of age class-specific provisioning performance, where late-life performance was particularly variable and had the greatest impact on survival, possibly indicating individual variation in senescence. There was no evidence to support a trade-off in reproductive performance and survival at the individual level. Overall, these results suggest that in gray seals, individual quality is a stronger driver in life history variation than individual strategies resulting from energetic trade-offs.