We examined larval fish assemblages in the southern East China Sea during late winter where large spawning grounds of several commercial pelagic fishes are formed. Our samples include a total of 187 species or taxa of larval fish belonging to 118 genera, 96 families, and 18 orders. Mesopelagic fish larvae, mainly Stomiiformes, Aulopiformes, and Myctophiformes, accounted for 66.5% of the total catch, while commercial species such as Trachurus japonicus, Scomber spp., and Trichiurus japonicus for 16.6%. Based on the species composition, three assemblages were recognized: Kuroshio (KUR), Shelf-Break (BRE), and Shelf (SHE) assemblages. KUR assemblage was mainly characterized by various mesopelagic fishes such as Sigmops gracilis, Diaphus spp., and Myctophum asperum, BRE assemblage by both commercial pelagic and mesopelagic species, SHE assemblage by demersal species such as Lepidotrigla spp. and Gobiidae spp. Both abundance and diversity were highest in KUR assemblage, although food availability for the larvae would be poorest. The combination of variables of sea surface temperature-chlorophyll a concentrations best explained the larval distribution. Except for Benthosema pterotum, the center of distribution of mesopelagic fish larvae was clearly separated from that of the commercial species by the Kuroshio front. However, a northward intrusion of the Kuroshio transported mesopelagic fish larvae onto the shelf, forming the BRE assemblage. Competition for prey between mesopelagic and commercial pelagic fish larvae would potentially occur if the intrusion is strong.