The uncoordinated scheduling and control of all-electric ships (AESs) will impose great challenges on voltage profiles in seaport microgrids. This article proposes a three-stage hierarchically coordinated voltage control strategy in seaport microgrids considering the optimal voyage navigation and scheduling of AES. In stage one, we first propose an arrival time estimation method for AES to reduce the potential voltage violation risk in different seaport microgrids. The optimal power flow (OPF) is then performed in each microgrid to determine the day-ahead dispatch of on-load tap changer (OLTC) and inverter-based renewable energy resources (RESs). In stage two, the optimal route planning is carried out based on the sea states and the Dijkstra algorithm. The voyage and generation scheduling of AES are formulated as optimization problems and solved by CPLEX solvers. In stage three, a real-time local voltage control strategy is performed to mitigate fast voltage violations. To fully exploit the voltage support capability of energy storage systems (ESSs) on berthed-in AES, both constant charging mode and voltage control mode are designed to regulate voltages while ensuring sufficient SOC levels of ESS when leaving the seaport. The simulation results verify the effectiveness of the proposed method both in saving the generation cost of AES and improving voltage profiles in seaport microgrids.