Enhancing mass transfer is imperative for mitigating concentration polarization and thereby optimizing fuel cell performance. This study presents numerical investigation to explore the performance of a proton exchange membrane fuel cell, which involves implementation of actively controlled fluctuating mass fluxes at cathode inlet in order to achieve desirable mass transfer enhancement. The trajectories of liquid droplets within channel were predicted by employing volume of fluid method. The results revealed that the current density exhibits frequency-dependent fluctuations, aligning with input oscillations. A marginal increase in mean current density was observed with frequency amplified and the maximum power density with fluctuated flow increased by 3.9 % compared to that with steady flow inlet. A noteworthy and linear augmentation was evident with amplitude escalation. The mean current density surpassed 34.7 % of the steady current at the amplitude of 10. Beyond a frequency threshold of 1000 Hz, the fluctuating current density surpassed that of steady flow throughout the entire period, attributed to the time constant of gas transport within the gas diffusion layer. Moreover, fluctuation phenomenon of the pressure field within the fuel cell channel, which contributed to reinforced mass transfer and accelerated product alleviation in the region facing bipolar rib was identified during gas transport in the gas diffusion layer. Numerical simulations adopting the volume of fluid method revealed a heightened tendency for the disintegration and expulsion of liquid droplets in the channel attributable to fluctuating flow.