Direct Human Disturbance Research Articles

The 400-year natural history of a tropical coastal mangrove-fringed lagoon: What can we learn?

Coastal lagoon ecosystems are important natural carbon sinks but are threatened by both climate change and direct human disturbances. By reconstructing the environmental change and carbon dynamics of the past 400years for a tropical mangrove-fringed lagoon system in Java, Indonesia, Hapsari et al. provide important insights into how climate change and human land use co-regulate the vegetation and carbon cycles of a tropical lagoon system and its catchment. This article is a commentary on Hapsari et al. 26, 1414-1431.

Site fertility drives temporal turnover of vegetation at high latitudes.

Experimental evidence shows that site fertility is a key modulator underlying plant community changes under climate change. Communities on fertile sites, with species having fast dynamics, have been found to react more strongly to climate change than communities on infertile sites with slow dynamics. However, it is still unclear whether this generally applies to high‐latitude plant communities in natural environments at broad spatial scales. We tested a hypothesis that vegetation of fertile sites experiences greater changes over several decades and thus would be more responsive under contemporary climate change compared to infertile sites that are expected to show more resistance. We resurveyed understorey communities (vascular plants, bryophytes, and lichens) of four infertile and four fertile forest sites along a latitudinal bioclimatic gradient. Sites had remained outside direct human disturbance. We analyzed the magnitude of temporal community turnover, changes in the abundances of plant morphological groups and strategy classes, and changes in species diversity. In agreement with our hypothesis, temporal turnover of communities was consistently greater on fertile sites compared to infertile sites. However, our results suggest that the larger turnover of fertile communities is not primarily related to the direct effects of climatic warming. Furthermore, community changes in both fertile and infertile sites showed remarkable variation in terms of shares of plant functional groups and strategy classes and measures of species diversity. This further emphasizes the essential role of baseline environmental conditions and nonclimatic drivers underlying vegetation changes. Our results show that site fertility is a key determinant of the overall rate of high‐latitude vegetation changes but the composition of plant communities in different ecological contexts is variously impacted by nonclimatic drivers over time.

Are We Capturing Faunal Intactness? A Comparison of Intact Forest Landscapes and the “Last of the Wild in Each Ecoregion”

Efforts to designate priority areas for conservation have had a long history, with most modern initiatives focused on either designating areas important for biodiversity or those least impacted by direct human disturbance. Ecologically intact ecosystems are becoming increasingly limited on the planet, making their identification and conservation an important priority. Intact forest landscapes (IFL) are defined as forests that are mainly free of significant anthropogenic degradation and at least 500 km2 in size. Here we define a new metric, the Last of the Wild in each Ecoregion (LWE), as a preliminary scoping of the most intact parts of each ecoregion. IFL and LWE are approaches among a broad family of techniques to mapping ecological integrity at the global scale. Although both implicitly include species integrity as a dimension of intactness, this is inferred rather than directly measured. We assessed whether IFL or LWE areas were better at capturing species where they are most abundant using species distribution data for a set of forest species for which range-wide data were available and human activity limits the range. We found that IFL and LWE methods identified areas where species we assessed are either absent or at too low an abundance to be ecologically functional. As such many IFL/LWE polygons did not have intact fauna. We also show that 54.7% of the terrestrial realm (excluding Antarctica) has at least one species recorded as extinct and that two thirds of IFL/LWE areas overlap with areas where species have gone extinct in the past 500 years. The results show that even within the most remote areas, serious faunal loss has taken place at many localities so direct species survey work is also needed to confirm faunal intactness.

Giant panda twin rearing without assistance requires more interactions and less rest of the mother-A case study at Vienna Zoo.

The giant pandas’ (Ailuropoda melanoleuca) reproductive strategy is unique among mammals. Yet there are characteristics of giant panda behaviour we do not fully understand. Probably one of the least understood is the assumption that in captivity virtually all giant panda females rear only one cub when twins are born and abandon the other if given the chance. So far, only two females have raised twins simultaneously, but just with intensive human assistance. This case-study marks the first successful rearing of giant panda twins in captivity entirely by the mother. Using video data for detailed behavioural observations, we provide the first behavioural assessment of a giant panda female raising two cubs simultaneously without direct human assistance or disturbance. We compared the maternal behaviour during the denning period of twin cubs raised in 2016 with two singleton cubs born 2007 and 2010. YANG YANG, the dam, rested less and interacted more with the twins than with the singletons in the first month postpartum and invested a greater part of her daily time budget on rearing the twins. We discuss potential favourable factors for the autonomous twin-rearing of a female giant panda, which could serve as a model for similar efforts elsewhere.

Phylogenetic and functional evidence suggests that deep-ocean ecosystems are highly sensitive to environmental change and direct human disturbance.

An understanding of the balance of interspecific competition and the physical environment in structuring organismal communities is crucial because those communities structured primarily by their physical environment typically exhibit greater sensitivity to environmental change than those structured predominantly by competitive interactions. Here, using detailed phylogenetic and functional information, we investigate this question in macrofaunal assemblages from Northwest Atlantic Ocean continental slopes, a high seas region projected to experience substantial environmental change through the current century. We demonstrate assemblages to be both phylogenetically and functionally under-dispersed, and thus conclude that the physical environment, not competition, may dominate in structuring deep-ocean communities. Further, we find temperature and bottom trawling intensity to be among the environmental factors significantly related to assemblage diversity. These results hint that deep-ocean communities are highly sensitive to their physical environment and vulnerable to environmental perturbation, including by direct disturbance through fishing, and indirectly through the changes brought about by climate change.

Landscape pattern and plant biodiversity in Mediterranean coastal dune ecosystems: Do habitat loss and fragmentation really matter?

AbstractAimHabitat fragmentation and loss are two of the most important factors driving current biodiversity decline. Nonetheless, the relationship between biodiversity and landscape patterns appears more complex than generally expected, depending on the species and communities involved. We aim to enrich knowledge concerning the relationship between plant diversity and landscape patterns along linear landscapes, such as Mediterranean coastal dunes. A dedicated buffering method considering multiple nested extents was developed for sampling linear landscapes (e.g. coastal or fluvial), which traditionally present a challenge for standard round or square sampling buffering approaches.LocationTyrrhenian coast of central Italy.MethodsBased on a database of plant community plots and functional traits from field measurements, for each plot we calculated taxonomic (TD) and functional (FD) diversity, which was further decomposed in functional evenness (FDeven) and mean trait dispersion (FDdisp). Relying on a land‐cover map, we computed a set of landscape metrics describing habitat loss, fragmentation and direct human disturbance at multiple extents around each plot. Diversity measures (TD, FD, FDeven and FDdisp) were then related to the landscape metrics at different scales via linear mixed‐effect models.ResultsOverall, the relationship between plant species diversity and landscape patterns was weak. We observed different responses of TD, FD, FDeven and FDdisp, which only emerged at fine‐medium scales. TD decreased with habitat loss and disturbance, while FD only with disturbance. FDeven decreased in more fragmented areas, while FDdisp was not affected by the selected landscape parameters.Main conclusionsLike other transitional areas, coastal strand and dune ecosystems exhibit steep gradients in biotic and environmental factors, are dynamic in location, and could be among the earliest to be affected by environmental drivers. However, the response of Mediterranean coastal dune plant diversity to habitat loss and fragmentation is weak. For these reasons, we propose that these plant communities are adapted to the ever‐changing nature of the coastal environment and consequently to changes in landscape pattern.

An innovative approach to disentangling the effect of management and environment on tree cover and density of protected areas in African savanna

In protected areas of the African savanna tree cover, structure and species composition are influenced by a combination of many different variables. These include complex and multi-scaled interplay of environmental factors such as water and nutrient availability, fire, herbivory and, when occurring, direct human disturbance. In this study, we conducted a comprehensive and comparative analysis of the spatial variability of tree cover and density in three neighboring Southern African National Parks (Kruger, Limpopo, and Gonarezhou) characterized by similar environmental conditions but different management plans. We sampled 3382 plots of 0.5 ha across the three parks using an innovative methodology defined as augmented visual interpretation, based on a free and open source software. This software, named Collect Earth, allows access to very high spatial and temporal resolution imagery archives. Spatial variability of tree cover and density was analyzed comparing the three parks and the two bioclimatic regions (semiarid and dry subhumid) characterizing them. The effect of relevant environmental variables such as edaphic factors, precipitation and fire frequency was also assessed. Kruger National Park is characterized by the lowest values of tree cover and density among the three Parks. Contrary to what was expected and the general trend of Southern Africa, the dry subhumid zone showed lower values of tree cover and density than the semiarid zone. Such variability is hypothesized to be related to the different managements of the three parks within the general environmental template characterizing the African savanna as well as differences in tree species composition between the two climatic zones.

Trawl exposure and protection of seabed fauna at large spatial scales

AbstractAimTrawling is the most widespread direct human disturbance on the seabed. Knowledge of the extent and consequences of this disturbance is limited because large‐scale distributions of seabed fauna are not well known. We map faunal distributions in the Australian Exclusive Economic Zone (EEZ) and quantify the proportion of their abundance that occurs in areas 1) that are directly trawled and 2) where legislation permanently prohibits trawling—defined as percentage exposure or protection, respectively. Our approach includes developing a method that integrates data from disparate seabed surveys to spatially expand predicted benthos distributions.LocationAustralia.MethodsWe collate data from 18 seabed surveys to map the distribution of seabed invertebrates (benthos) in nine regions. Our approach combines data from multiple surveys, groups taxa within taxonomic classes and uses Random Forests to predict spatial abundance distributions of benthos groups from environmental variables. Exposure and protection of benthos groups were quantified by mapping their predicted abundance distributions against the footprint of trawling and legislated boundaries of marine reserves and fishery closures.ResultsTrawling is currently prohibited from more area of Australia's EEZ (58%) than is trawled (<5%). Across 134 benthos groups, 96% had greater protection of abundance than exposure. The mean trawl exposure of benthos‐group abundance was 7%, compared to mean protection of 38%, whereas the mean abundance neither trawled nor protected was 55%. Fishery closures covered 19% less study area than marine reserves, but overlapped with a higher proportion (5% more) of benthos‐group abundance.Main ConclusionsThis study provides the most extensive quantitative assessment of the current exposure of Australia's benthos to trawling. Further, it highlights the contribution of fishery closures to marine conservation. These results help identify regions and taxa that are at greatest potential risk from trawling and support managers to achieve balance between conservation and sustainable industries in marine ecosystems.

Toward a Global Classification of Coastal Anthromes

Given incontrovertible evidence that humans are the most powerful agents of environmental change on the planet, research has begun to acknowledge and integrate human presence and activity into updated descriptions of the world’s biomes as “anthromes”. Thus far, a classification system for anthromes is limited to the terrestrial biosphere. Here, I present a case for the consideration and validity of coastal anthromes. Every coastal environment on Earth is subject to direct and indirect human modification and disturbance. Despite the legacy, ubiquity, and pervasiveness of human interactions with coastal ecosystems, coastal anthromes still lack formal definition. Following the original argument and framework for terrestrial anthromes, I outline a set of coastal anthrome classifications that dovetail with terrestrial and marine counterparts. Recognising coastal environments as complex and increasingly vulnerable anthropogenic systems is a fundamental step toward understanding their modern dynamics—and, by extension, realising opportunities for and limits to their resilience.

Potential Responses of Vascular Plants from the Pristine "Lost World" of the Neotropical Guayana Highlands to Global Warming: Review and New Perspectives.

The neotropical Guayana Highlands (GH) are one of the few remaining pristine environments on Earth, and they host amazing biodiversity with a high degree endemism, especially among vascular plants. Despite the lack of direct human disturbance, GH plants and their communities are threatened with extinction from habitat loss due to global warming (GW). Geographic information systems simulations involving the entire known vascular GH flora (>2430 species) predict potential GW-driven extinctions on the order of 80% by the end of this century, including nearly half of the endemic species. These estimates and the assessment of an environmental impact value for each species led to the hierarchization of plants by their risk of habitat loss and the definition of priority conservation categories. However, the predictions assume that all species will respond to GW by migrating upward and at equal rates, which is unlikely, so current estimates should be considered preliminary and incomplete (although they represent the best that can be done with the existing information). Other potential environmental forcings (i.e., precipitation shifts, an increase in the atmospheric CO2 concentration) and idiosyncratic plant responses (i.e., resistance, phenotypic acclimation, rapid evolution) should also be considered, so detailed eco-physiological studies of the more threatened species are urgently needed. The main obstacles to developing such studies are the remoteness and inaccessibility of the GH and, especially, the difficulty in obtaining official permits for fieldwork.

The sensitivity of Afromontane tarns in the Maloti-Drakensberg region of South Africa and Lesotho to acidic deposition

Despite their remoteness from sources of atmospheric pollutant emissions, the Afromontane tarns in the Maloti-Drakensberg region are perfect candidates to study the negative effects of acidifying atmospheric pollution, because mountain lakes are widely recognised as sentinel ecosystems, unimpacted by direct human disturbance within their catchments. Thirty-four tarns were sampled in the Maloti-Drakensberg region and most were found to be extremely sensitive to acidic deposition, as indicated by their low acid neutralising capacity. There are very few studies of freshwater critical loads for any region within South Africa. The steady-state water chemistry model (SSWC) was adapted and used to determine critical loads, whereas exceedance was estimated relative to modelled regional deposition data, in order to understand the risk of harmful effects to aquatic ecosystems. Seventy-six percent of sampled sites across the Maloti-Drakensberg would exceed critical loads even at the lowest modelled deposition levels, but there are no current measured deposition data for the region. The sensitivity of the Maloti-Drakensberg tarns needs to be considered in future policy formulation regarding acceptable levels of acidifying atmospheric pollution from South Africa’s energy sector and indicates the need for assessing aquatic ecosystem impacts in other regions of South Africa.

Flight Initiation Distance in a Freshwater Turtle,Chrysemys picta

Abstract Many wild animals are subjected to anthropogenic stressors in the form of direct human disturbances from recreational activities. However, for many species it is unknown how these stressors affect individual fitness and behavior. We tested whether painted turtles (Chrysemys picta), an imperiled freshwater species, would allow closer human approach as measured by the flight initiation distance in the regular presence of humans compared with turtles not exposed to humans. We collected data at a site closed to recreation and at one with regular recreation and found that painted turtles regularly exposed to the presence of humans had significantly shorter average flight initiation distances compared with those at the nonrecreation site. The ability of turtles to tolerate closer human approaches in recreational areas may allow turtle populations to coexist in the presence of some recreational uses.

Baseline reef health surveys at Bangka Island (North Sulawesi, Indonesia) reveal new threats.

Worldwide coral reef decline appears to be accompanied by an increase in the spread of hard coral diseases. However, whether this is the result of increased direct and indirect human disturbances and/or an increase in natural stresses remains poorly understood. The provision of baseline surveys for monitoring coral health status lays the foundations to assess the effects of any such anthropogenic and/or natural effects on reefs. Therefore, the objectives of this present study were to provide a coral health baseline in a poorly studied area, and to investigate possible correlations between coral health and the level of anthropogenic and natural disturbances. During the survey period, we recorded 20 different types of coral diseases and other compromised health statuses. The most abundant were cases of coral bleaching, followed by skeletal deformations caused by pyrgomatid barnacles, damage caused by fish bites, general pigmentation response and galls caused by cryptochirid crabs. Instances of colonies affected by skeletal eroding bands, and sedimentation damage increased in correlation to the level of bio-chemical disturbance and/or proximity to villages. Moreover, galls caused by cryptochirid crabs appeared more abundant at sites affected by blast fishing and close to a newly opened metal mine. Interestingly, in the investigated area the percentage of corals showing signs of ‘common’ diseases such as black band disease, brown band disease, white syndrome and skeletal eroding band disease were relatively low. Nevertheless, the relatively high occurrence of less common signs of compromised coral-related reef health, including the aggressive overgrowth by sponges, deserves further investigation. Although diseases appear relatively low at the current time, this area may be at the tipping point and an increase in activities such as mining may irredeemably compromise reef health.

ASSESSMENT OF MANGROVE FOREST DEGRADATION THROUGH CANOPY FRACTIONAL COVER IN KARIMUNJAWA ISLAND, CENTRAL JAVA, INDONESIA

The Karimunjawa Islands mangrove forest has been subjected to various direct and indirect human disturbances in the recent years. If not properly managed, this disturbance will lead to the degradation of mangrove habitat health. Assessing forest canopy fractional cover (fc) using remote sensing data is one way of measuring mangrove forest degradation. This study aims to (1) estimate the forest canopy fc using a semi-empirical method, (2) assess the accuracy of the fc estimation and (3) create mangrove forest degradation from the canopy fc results. A sample set of in-situ fc was collected using the hemispherical camera for model development and accuracy assessment purposes. We developed semi-empirical relationship models between pixel values of ALOS AVNIR-2 image (10m pixel size) and field fc, using Enhanced Vegetation Index (EVI) as a proxy of the image spectral response. The results show that the EVI provides reasonable estimation accuracy of mangrove canopy fc in Karimunjawa Island with the values ranged from 0.17 to 0.96 (n = 69). The low fc values correspond to vegetation opening and gaps caused by human activities or mangrove dieback. The high fc values correspond to the healthy and dense mangrove stands, especially the Rhizophora sp formation at the seafront. The results of this research justify the use of simple canopy fractional cover model for assessing the mangrove forest degradation status in the study area. Further research is needed to test the applicability of this approach at different sites.

Mercury pollution in the lake sediments and catchment soils of anthropogenically-disturbed sites across England

Sediment cores and soil samples were taken from nine lakes and their catchments across England with varying degrees of direct human disturbance. Mercury (Hg) analysis demonstrated a range of impacts, many from local sources, resulting from differing historical and contemporary site usage and management. Lakes located in industrially important areas showed clear evidence for early Hg pollution with concentrations in sediments reaching 400–1600 ng g−1 prior to the mid-19th century. Control of inputs resulting from local management practices and a greater than 90% reduction in UK Hg emissions since 1970 were reflected by reduced Hg pollution in some lakes. However, having been a sink for Hg deposition for centuries, polluted catchment soils are now the major Hg source for most lakes and consequently recovery from reduced Hg deposition is being delayed.

Population structure and phylogeography of the Gentoo Penguin (Pygoscelis papua) across the Scotia Arc.

Climate change, fisheries' pressure on penguin prey, and direct human disturbance of wildlife have all been implicated in causing large shifts in the abundance and distribution of penguins in the Southern Ocean. Without mark‐recapture studies, understanding how colonies form and, by extension, how ranges shift is challenging. Genetic studies, particularly focused on newly established colonies, provide a snapshot of colonization and can reveal the extent to which shifts in abundance and occupancy result from changes in demographic rates (e.g., reproduction and survival) or migration among suitable patches of habitat. Here, we describe the population structure of a colonial seabird breeding across a large latitudinal range in the Southern Ocean. Using multilocus microsatellite genotype data from 510 Gentoo penguin (Pygoscelis papua) individuals from 14 colonies along the Scotia Arc and Antarctic Peninsula, together with mitochondrial DNA data, we find strong genetic differentiation between colonies north and south of the Polar Front, that coincides geographically with the taxonomic boundary separating the subspecies P. p. papua and P. p. ellsworthii. Using a discrete Bayesian phylogeographic approach, we show that southern Gentoos expanded from a possible glacial refuge in the center of their current range, colonizing regions to the north and south through rare, long‐distance dispersal. Our findings show that this dispersal is important for new colony foundation and range expansion in a seabird species that ordinarily exhibits high levels of natal philopatry, though persistent oceanographic features serve as barriers to movement.

Global change pressures on soils from land use and management.

Soils are subject to varying degrees of direct or indirect human disturbance, constituting a major global change driver. Factoring out natural from direct and indirect human influence is not always straightforward, but some human activities have clear impacts. These include land-use change, land management and land degradation (erosion, compaction, sealing and salinization). The intensity of land use also exerts a great impact on soils, and soils are also subject to indirect impacts arising from human activity, such as acid deposition (sulphur and nitrogen) and heavy metal pollution. In this critical review, we report the state-of-the-art understanding of these global change pressures on soils, identify knowledge gaps and research challenges and highlight actions and policies to minimize adverse environmental impacts arising from these global change drivers. Soils are central to considerations of what constitutes sustainable intensification. Therefore, ensuring that vulnerable and high environmental value soils are considered when protecting important habitats and ecosystems, will help to reduce the pressure on land from global change drivers. To ensure that soils are protected as part of wider environmental efforts, a global soil resilience programme should be considered, to monitor, recover or sustain soil fertility and function, and to enhance the ecosystem services provided by soils. Soils cannot, and should not, be considered in isolation of the ecosystems that they underpin and vice versa. The role of soils in supporting ecosystems and natural capital needs greater recognition. The lasting legacy of the International Year of Soils in 2015 should be to put soils at the centre of policy supporting environmental protection and sustainable development.

Climate-driven changes in UK river flows

There is a burgeoning international literature on hydro-climatic trend detection, motivated by the need to detect and interpret any emerging changes in river flows associated with anthropogenic climate change. The UK has a particularly strong evidence base in this area thanks to a well-developed monitoring programme and a wealth of studies published over the last 20 years. This paper reviews this research, with a view to assessing the evidence for climate change influences on UK river flow, including floods and droughts. This assessment is of international relevance given the scale of the research effort in the UK, a densely monitored and data-rich environment, but one with significant human disturbances to river flow regimes, as in many parts of the world. The review finds that changes can be detected in river flow regimes, some of which agree with future change projections, while others are in apparent contradiction. Observed changes generally cannot be attributed to climate change, largely due to the fact that river flow records are limited in length and the identification of short-term trends is confounded by natural variability. A UK ‘Benchmark’ network of near-natural catchments is an internationally significant example of an initiative to enable climate variability to be discerned from direct human disturbances (e.g. abstractions, dam construction). Generally, however, the problem of attribution has been tackled rather indirectly in the UK, as elsewhere, and more efforts are required to attribute change in a more rigorous manner.

Species turnover in tropical montane forest avifauna links to climatic correlates

We examined avifauna richness and composition in Taiwan’s tropical montane forests, and compared to historical records dated 22 years ago. A richness attrition of 44 species caused a discrepancy of 30.2%, and an estimated yearly turnover of 2.2%. More resident species that were narrower or lower in elevation distribution, insectivores/omnivores, small to medium-sized, forest/open-field dwelling, and canopy/ground foragers, vanished; whereas piscivores, carnivores, riparian- and shrub-dwellers, ground and mid-layer foragers, and migrants suffered by higher proportions. Occurrence frequencies of persistent species remained constant but varied among ecological groups, indicating an increased homogeneity for smaller-sized insectivores/omnivores dwelling in the forest canopy, shrub, or understory. While the overall annual temperature slightly increased, a relatively stable mean temperature was replaced by an ascending trend from the mid-1990s until 2002, followed by a cooling down. Mean maximum temperatures increased but minimums decreased gradually over years, resulting in increasing temperature differences up to over 16 °C. This accompanied an increase of extreme typhoons affecting Taiwan or directly striking these montane forests during the last decade. These results, given no direct human disturbances were noted, suggest a link between the species turnover and recent climate change, and convey warning signs of conservation concerns for tropical montane assemblages.

Selection of anthropogenic features and vegetation characteristics by nesting Common Ravens in the sagebrush ecosystem

Common Raven (Corvus corax) numbers and distribution are increasing throughout the sagebrush steppe, influencing avian communities in complex ways. Anthropogenic structures are thought to increase raven populations by providing food and nesting subsidies, which is cause for concern because ravens are important nest predators of sensitive species, including Greater Sage-Grouse (Centrocercus urophasianus). During 2007–2009, we located raven nests in southeastern Idaho and conducted a resource selection analysis. We measured variables at multiple spatial scales for 72 unique nest locations, including landscape-level vegetation characteristics and anthropogenic structures. Using generalized linear mixed models and an information-theoretic approach, we found a 31% decrease in the odds of nesting by ravens for every 1 km increase in distance away from a transmission line. Furthermore, a 100-m increase in distance away from the edge of two different land cover types decreased the odds of nesting by 20%, and an increase in the amount of edge by 1 km within an area of 102.1 ha centered on the nest increased the odds of nesting by 49%. A post hoc analysis revealed that ravens were most likely to nest near edges of adjoining big sagebrush (Artemisia tridentata) and land cover types that were associated with direct human disturbance or fire. These findings contribute to our understanding of raven expansion into rural environments and could be used to make better-informed conservation decisions, especially in the face of increasing renewable energy development.