Diel Patterns Research Articles

Preliminary Data about Habitat Use of Subadult and Adult White Sharks (Carcharodon carcharias) in Eastern Australian Waters.

Simple SummaryIn eastern Australia, the movement of subadult and adult white sharks is poorly understood as very few animals are encountered. To investigate how deep they dive, where they travel and water temperatures they live in, we tagged three white sharks (340–388 cm total length) between May 2021 and January 2022. All sharks moved away from the coast after release and preferred offshore habitats. The three sharks mainly stayed within 50 m of the surface, in water temperatures between 14–19 °C and dived deeper during the day. They all moved north–south along the coastline and spent little time in the same location but there was evidence that they stayed in some locations longer than others. Very little information is available for adult white sharks in eastern Australia and studies like this provide key information about their preferences. As they travel long distances it is important for multijurisdictional management to effectively mitigate human-shark interactions whilst supporting conservation efforts.In eastern Australia, white sharks (Carcharodon carcharias) are targeted in shark control programs, yet the movement of subadults and adults of the eastern Australasian population is poorly understood. To investigate horizontal and vertical movement and habitat use in this region, MiniPAT pop-up satellite archival tags were deployed on three larger white sharks (340–388 cm total length) between May 2021 and January 2022. All sharks moved away from the coast after release and displayed a preference for offshore habitats. The upper < 50 m of the water column and temperatures between 14–19 °C were favoured, with a diel pattern of vertical habitat use evident as deeper depths were occupied during the day and shallower depths at night. Horizontal movement consisted of north–south seasonality interspersed with periods of residency. Very little information is available for adult white sharks in eastern Australia and studies like this provide key baseline information for their life history. Importantly, the latitudinal range achieved by white sharks illuminate the necessity for multijurisdictional management to effectively mitigate human-shark interactions whilst supporting conservation efforts of the species.

Diel, temporal, and spatial patterns of biotic soundscapes among Alabama artificial reefs in late spring and summer

Passive acoustic monitoring (PAM) in a variety of marine habitats has revealed distinct spatial and temporal variation of fish sounds that are predicted to vary in association with species composition and abundance, as well as diel and seasonal influences. Reefs in the Alabama Artificial Reef Zone (AARZ) in the northern Gulf of Mexico (nGOM) have an associated fish fauna composed of warm-temperate and tropical reef associated species. AARZ reefs are made of different structures (e.g. bridge rubble, concrete pyramids, etc.) and as a result, their fish species composition is predicted to vary. We used PAM to describe fish sounds on 18 shallow slope (20-33 m) AARZ reefs in 2017 and 2018. We detected calls from unknown sources, as well as sounds from leopard toadfishOpsanus pardus, cocoa damselfishStegastes variabilis, and cusk-eels (Ophidiidae). We developed semi-automated screening methods to detect specific sound types and described diel and spatial patterns. Sound detection rates varied widely among reefs, but not by reef type. Number of sound types increased with species richness, but detection rates of specific sounds differed on reefs with similar species composition. Our results indicate that many frequently occurring sounds may not be associated with visually conspicuous fishes. Further research is needed to determine source species and associated behavior for common sounds in these habitats. Soundscape variability among nGOM artificial reefs may be a consideration for management, as biological sound can provide an acoustic cue for reef location by some larval and adult fish species.

Strong variability in nitrogen (N) removal rates in typical agricultural pond from hilly catchment: Evidence from diel and monthly dissolved N2 measurement

Ponds, depressional submerged landscapes that can store and process nitrogen (N)-enriched runoff from surrounding uplands, are recognized as biogeochemical hotspots for N removal. Despite their strong potential for N removal, information is limited concerning the specifics of their changing nature. Here, we investigated the dynamics of N removal rate in a typical agricultural pond from a hilly catchment, by unraveling the monthly and diel patterns of N2 concentrations and fluxes. Our observations showed that the N pollution in the pond was severe. Its averaged total N level reached 3.6 mg L−1, of which ∼72% consisted of NO3–N. Meanwhile, the water samples were supersaturated with N2, demonstrating N removal occurring in the pond. Further estimates of net N2 fluxes indicated that N removal rates exhibited obvious day-and-night and monthly differences. On the diel scale, N removal rates exhibited a distinct diurnal cycle, with nocturnal rates around 20% higher than during the day. Such a diel pattern can be mainly explained by the fluctuation in DO levels, showing that at nighttime when photosynthesis is absent, low DO environments are conducive to N removal. On a monthly scale, the monthly rates ranged from 0.02 to 0.49 mmol N2 m−2 h−1 (mean: 0.23 mmol N2 m−2 h−1), with generally higher removal rates in the warmer and concurrently rainy months (June–September). N levels in the pond were the corresponding primary explanatory variables. Assembled data from both monthly and hourly scales provided a more complete picture of the changing nature of N removal in ponds. Future work should carefully consider the effects of altered environmental conditions triggered by hydrological events to better reveal the control mechanisms behind the time-immediate N removal from lowland ponds.

Reef effect of offshore structures on the occurrence and foraging activity of harbour porpoises

With increasing numbers of offshore structures being installed and decommissioned, a better understanding of their effect on marine predators is timely. There is some evidence that oil and gas platforms may attract marine mammals, acting as artificial reefs. However, it is unclear whether different man-made structure designs have similar effects or whether artificial structures modify the diel patterns of occurrence and foraging of marine mammals. Here, we used passive acoustics to investigate the occurrence and foraging activity of harbour porpoises (Phocoena phocoena) around four artificial structures of different age and complexity. We deployed an array of echolocation click detectors (CPODs) in 2021, along a gradient of distances to these structures and assessed the extent to which porpoises were attracted to them and their effect on porpoises’ diel patterns of occurrence and foraging activity. The probability of porpoise occurrence and foraging activity decreased with distance from offshore structures. A significant increase in porpoise occurrence and foraging was detected during night-time compared to daytime around all four offshore structures (&amp;lt; 200 m). Comparing pre- and post-installation porpoise detections, the daily patterns of occurrence and foraging activity shifted from a weak diel pattern before the structure was installed, to a strong nocturnal pattern when the structure was present. These findings provide evidence that marine mammals are attracted to man-made structures and that porpoises modify their diel patterns of occurrence and foraging activity around them. This research suggests that offshore structures play an important role as foraging areas for some marine mammals and provides key information for decommissioning considerations and the planning of decommissioning activities.

Temporal gene expression patterns in the coral Euphyllia paradivisa reveal the complexity of biological clocks in the cnidarian-algal symbiosis

Studying chronobiology in reef-building corals is challenging due to the tightly coupled symbiosis with their photosynthetic algae, Symbiodiniaceae. Although symbiosis requires metabolic synchronization and coordination of cellular processes in the holobiont, the cross-talk between the host and symbiont’s clocks is still puzzling. Here, we use the mesophotic coral Euphyllia paradivisa to examine temporal gene expression patterns in symbiotic and aposymbiotic morphs exposed to natural light/dark cycles and constant darkness. Our comparative transcriptomic analyses revealed circadian and circatidal cycles of gene expression with a predominant diel pattern in both coral morphs. We found a substantial number of transcripts consistently rhythmic under both light conditions, including genes likely involved in the cnidarians’ circadian clock, thus indicating that an endogenous clock, which can oscillate independently from the Symbiodiniaceae clock, exists in E. paradivisa. The analysis further manifests the remarkable impacts of symbiosis on transcriptional rhythms and implies that the algae’s presence influences the host’s biorhythm.

Carbon and nitrogen metabolic regulation in freshwater plant Ottelia alismoides in response to carbon limitation: A metabolite perspective.

Carbon and nitrogen metabolism are basic, but pivotal metabolic pathways in plants and are tightly coupled. Maintaining the balance of carbon and nitrogen metabolism is critical for plant survival. Comprehensively revealing the metabolic balance of carbon–nitrogen interactions is important and helpful for understanding the adaptation of freshwater plants to CO2 limited aqueous environment. A comprehensive metabolomics analysis combined with physiological measurement was performed in the freshwater plant Ottelia alismoides acclimated to high and low CO2, respectively, for a better understanding of how the carbon and nitrogen metabolic adjustment in freshwater plants respond to carbon limitation. The present results showed that low CO2 acclimated O. alismoides exhibited significant diurnal titratable acidity and malate fluctuations, as well as an opposite diel pattern of starch change and high enzymatic activities required for crassulacean acid metabolism (CAM) photosynthesis, which indicates that CAM was induced under low CO2. Moreover, the metabolomic analysis showed that most intermediates of glycolysis, pentose phosphate pathway (PPP) and tricarboxylic acid (TCA) cycle, were increased under low CO2, indicative of active respiration in low-CO2-treated O. alismoides. Meanwhile, the majority of amino acids involved in pathways of glutamate and arginine metabolism, aspartate metabolism, and the branched-chain amino acids (BCAAs) metabolism were significantly increased under low CO2. Notably, γ-aminobutyric acid (GABA) level was significantly higher in low CO2 conditions, indicating a typical response with GABA shunt compensated for energy deprivation at low CO2. Taken together, we conclude that in low-CO2-stressed O. alismoides, CAM photosynthesis was induced, leading to higher carbon and nitrogen as well as energy requirements. Correspondingly, the respiration was greatly fueled via numerous starch degradation to ensure CO2 fixation in dark, while accompanied by linked promoted N metabolism, presumably to produce energy and alternative carbon sources and nitrogenous substances for supporting the operation of CAM and enhancing tolerance for carbon limitation. This study not only helps to elucidate the regulating interaction between C and N metabolism to adapt to different CO2 but also provides novel insights into the effects of CO2 variation on the metabolic profiling of O. alismoides.

Seasonal and diel patterns in singing activity of humpback whales migrating through Bermuda

Humpback whales (Megaptera novaeangliae) produce song and non-song vocalisations, which allows their presence to be detected through passive acoustic monitoring. To determine the seasonal and diel acoustic presence and acoustic behaviour of humpback whales at the migratory stopover site off Bermuda, three hydrophones were deployed between March 2018 and April 2019 on Challenger Bank and the Bermuda platform. Song was the predominant vocalisation type encountered, with 65% of song recordings containing whale chorus and a clear seasonal trend of humpback whale occurrence in the spring and winter months from late December to mid-May. A strong diel pattern in singing activity was detected. Singing activity significantly increased at night relative to the daytime (p&amp;lt;0.01), whilst twilight periods were characterised by intermediate levels of singing. The song structure encountered in spring 2018 consisted of 18 units, 6 themes and 5 transitional phrases. The high occurrence of whale chorus and the strong seasonal and diel patterns of male humpback whale singing activity highlights the importance of Bermuda not just on their northward migration during spring, as described historically, but also on their southward migration during winter. Bermuda therefore constitutes a two-way migratory stopover site for humpback whales. The present study also provides Bermuda’s planning authorities with better constraints on the duration and intensity of anthropogenic activities in these waters.

Empirically testing the influence of light regime on diel activity patterns in a marine predator reveals complex interacting factors shaping behaviour

Abstract Diel cycles in marine predator diving behaviour centre around the light‐mediated diel vertical migration (DVM) of prey, and are considered critical for optimizing foraging and limiting competition across global seascapes. Yet, our understanding of predator diel behaviour is based primarily on examining relative depth usage between constant day/night cycles with no formal investigation of how varying light regimes interact with abiotic factors to shape diel activity. The extreme seasonal light regimes (midnight sun, polar night, day/night cycle) in the Arctic provide a unique natural experimental setting to empirically investigate the occurrence and intensity of diel behaviour in marine predators relative to changing light levels while concomitantly assessing interacting abiotic factors. Depth time series data from satellite‐linked tags deployed on six beluga whales (Delphinapterus leucas) for up to 12 months were used to quantify diel behaviour by calculating dissimilarity in time‐at‐depth between periods of low and high solar altitude on each day. Generalized additive mixed effects models were used to examine the influence of hours of daylight across extreme light cycles, coupled with bathymetry and sea ice concentration; focal diel patterns were further examined relative to the thermal structure of the water column. As predicted, belugas exhibited cathemerality during the midnight sun, and initiated diel behaviour with the onset of the fall day/night cycle, with a marked increase in its intensity with the progression to equal day/night length. Occurrence of diel patterns, however, was complex; ceasing in regions with seafloor depths &lt;700 m, and occurring with greatest intensity when the water column was thermally homogeneous within the upper 150 m. Through empirical investigation, this study demonstrates that the onset of day/night light cycles and presumably associated prey DVM can modulate predator diel dive behaviour under certain circumstances, but highlights how the complex interaction of abiotic factors with light regime shape dynamic spatiotemporal patterns. These findings, building on a body of recent work, emphasize that the traditional view of the ubiquitous occurrence of diel behaviour tied to DVM at the base of the food web oversimplifies vertical predator–prey interactions, identifying the need for more structured investigation. Read the free Plain Language Summary for this article on the Journal blog.

Using acoustics and artificial intelligence to monitor pollination by insects and tree use by woodpeckers.

The collection and interpretation of field data is a prerequisite for informed conservation in protected environments. Although several techniques, including camera trapping and passive acoustic monitoring, have been developed to estimate the presence of animal species, very few attempts have been made to monitor ecological functions. Pollination by insects and wood use, including tree related foraging and intraspecific communication, by woodpeckers are key functions that need to be assessed in order to better understand and preserve forest ecosystems within the context of climate change. Here, we developed and applied for the first time an acoustic survey to monitor pollination by insects and wood use by woodpeckers in a protected Alpine forest in France. We deployed four autonomous recorders over a year, resulting in 2285 h of recordings. We trained a convolutional neural network (CNN) on spectrographic images to automatically detect the sounds of flying insects' buzzing and woodpeckers' drumming as they forage and call. We used the output of the CNN to estimate the seasonality, diel pattern, climatic breadth and distribution of both functions and their relationships with weather parameters. Our method showed that insects were flying (therefore potentially pollinating flowers) in bright, warm and dry conditions, after dawn and before dusk during spring and summer. Woodpeckers were mainly drumming around March at the time of pair formation in cool and wet conditions. Having considered the role of weather parameters, climate change might have contrasting effects on insect buzzing and woodpecker drumming, with an increase in temperature being favorable to pollination by insects but not to wood use by woodpeckers, and a concomitant increase in relative humidity being favorable to wood use but not to pollination. This study reveals that a systemic facet of biodiversity can be tracked using sound, and that acoustics provide valuable information for the environment description.

Diel Periodicity in Males of the Navel Orangeworm (Lepidoptera: Pyralidae) as Revealed by Automated Camera Traps.

Navel orangeworm, Amyelois transitella (Walker), is a key pest of walnuts, pistachio, and almonds in California. Pheromone mating disruption using timed aerosol dispensers is an increasingly common management technique. Dispenser efficiency may be increased by timing releases with the active mating period of navel orangeworm. Past work found that the peak time of sexual activity for navel orangeworm females is 2 h before sunrise when temperatures are above 18°C. Inference of male responsiveness from data collected in that study was limited by the necessity of using laboratory-reared females as a source of sex pheromone emission to attract males and the inherent limitations of human observers for nocturnal events. Here we used camera traps baited with artificial pheromone to observe male navel orangeworm mating response in the field over two field seasons. Male response to synthetic pheromone exhibited diel patterns broadly similar to females, i.e., they were active for a brief period of 2–3 h before dawn under summer conditions and began responding to pheromone earlier and over a longer period of time during spring and fall. But contrary to the previous findings with females, some males were captured at all hours of the day and night, and there was no evidence of short-term change of pheromone responsiveness in response to temperature. Environmental effects on the response of navel orangeworm males to an artificial pheromone source differ in important ways from the environmental effects on female release of sex pheromone.

Temporal Trends and Effects of Noise on Upsweep Calls of Eastern South Pacific Southern Right Whales

Eastern South Pacific southern right whales (ESPSRW) are a subpopulation of southern right whales (Eubalaena australis) off the coasts of Peru and Chile recognized by the International Union for the Conservation of Nature (IUCN) as critically endangered as a result of heavy whaling efforts in the late 18th to 20th centuries. Most recent population estimates put their numbers around 50 individuals. To test for the efficacy of passive acoustic monitoring of this population, we recorded 5 months of continuous acoustic data (January 2012-June 2012) off the southwestern tip of Isla de Chiloé. To test for trends in occurrence, we identified 11,313 individual ESPSRW upsweep calls, which have been associated with maintaining contact with conspecifics. Call occurrence increased over the course of the deployment and peaked between April and June, indicating an increase in use of this area. A clear diel pattern in which upsweep calls were predominately detected during dusk and night hours was identified, indicating ESPSRW are likely foraging during daylight hours, as upsweep calls are inversely related to foraging behavior. We quantified noise levels in the frequency range of their communication (100 Hz third octave) to understand the change in active space whales may be experiencing. We measured noise levels from 90 dB re 1 μPa to 111 dB re 1 µPa (5th and 95th percentile), a 21 dB fluctuation that results in an order-of-magnitude decrease in active space area. We identified sources of high noise at or above the 75th percentile as predominately blue whale calls (occurring in 71.6% of total sampled minutes) and ship noise (occurring in 69.4% of total sampled minutes). Ship noise was responsible for outliers in excess of 140 dB re 1 µPa. In a population as diminished as ESPSRW, such disruptions of their communication range could result in significant barriers to maintaining contact with conspecifics. Passive acoustic monitoring is a powerful tool for monitoring populations as rarely sighted as ESPSRW. Understanding trends in presence and behavior as well as potential sources of disruption to their calling behavior is vital to determining conservation measures that will be most effective toward helping this critically endangered population.

Diel and seasonal variation of Striped Cuckoo (Tapera naevia) vocalizations revealed using automated signal recognition

Studying seasonal changes in the vocal activity of birds may shed light on the function of avian vocalizations and the phenology of life history events. Our current knowledge regarding the seasonality of the vocal behaviour of tropical birds in general, and avian brood parasites in particular, is very limited. Here, we employed passive acoustic monitoring with automated signal recognition to monitor the vocal behaviour of the Striped Cuckoo Tapera naevia over a complete annual cycle in the Brazilian Pantanal. We evaluated whether the pattern of vocal activity differed between the two main vocalizations of the species (sem‐fim and wee‐series songs) and whether vocal activity varied with time of day and season. The diel pattern of vocal activity for both vocalization types showed a bimodal pattern, with the first peak of vocal activity in the few hours after sunrise and the second peak before sunset, in agreement with prior studies in other cuckoos. The sem‐fim song was also produced during the night, while the wee‐series song was produced only during the day. Both vocalization types showed clear seasonality and were produced between mid‐June and mid‐February. Seasonal changes in vocal activity suggest that the Striped Cuckoo breeds during the dry season and leaves the study area during the flooding period. The seasonal pattern of the wee‐series song showed strong seasonality, with 90% of these calls detected in September and October, whereas the sem‐fim song showed weaker seasonality, with 80% of the calls detected during the July–October period. Our study indicates that automated signal recognition might be a reliable tool for monitoring cuckoos. Further research could evaluate whether the different seasonal patterns of the sem‐fim and wee‐series songs of the Striped Cuckoo are related to different functions.

Hurry up and sing: early onset of diel calling behaviour and ecological drivers of calling behaviour of Acanthoplus discoidalis

ABSTRACT Animals adopt circadian rhythms and diel calling patterns to ensure successful breeding, avoid predators, and reduce intra- and inter-species competition. We determine the diel calling behaviour of the bush cricket, Acanthoplus discoidalis, across different vegetation types in the southern Kalahari, and whether any variation in calling behaviour exists across the different regions of the landscape. We identify potential environmental drivers impacting its calling behaviour, as well as any impact temperature and wind may have on the species’ calling behaviour. Acanthoplus discoidalis was recorded singing in all vegetation types, calling starts around 10h00 and ceases at 00h00, with a peak from 15h00 to 23h00, a longer peak than expected based on previous studies. This pattern was consistent across all vegetation types, although calling intensity was less in mountainous, rocky, and windy areas. A likely explanation for the expanded diel pattern is that sampling occurred during a mass emergence of the species, and so a wider temporal niche could be a response to reduce intraspecies competition for females. Furthermore, this diel calling pattern may reduce encounters with predators, which are typically either strictly nocturnal or diurnal, yet it is likely this species relies on physical defences over acoustic adaptations to avoid predation.

Fine-scale movement of northern Gulf of Mexico red snapper and gray triggerfish estimated with three-dimensional acoustic telemetry

Red snapper and gray triggerfish are ecologically, economically, and culturally important reef fishes in the northern Gulf of Mexico (nGOM). Scientists and managers have sought to understand the effects of artificial reefs on reef fish ecology by focusing on fish residency and movement at artificial reefs with less attention paid to broader spatial and temporal patterns in reef fish movements among a seascape of artificial reefs and other natural habitats. We used novel large-scale (> 15 km2) geopositioning acoustic telemetry arrays to track the 3-dimensional movements of tagged red snapper (n = 59) and gray triggerfish (n = 15) among multiple nGOM artificial reefs up to 333 days. Tagged fish moved frequently among artificial reefs and had shorter residence times at the release reef (43 days for red snapper and 3 days for gray triggerfish) than reported in previous studies. Both species displayed high individual variability in movement dynamics, as well as seasonally variable diel patterns of habitat use, height above bottom, and distance to reefs, which may have been driven by dynamic influences of predation risk, physiological constraints, or foraging over time and space. The wider seascape view revealed in this study demonstrates the importance of including multiple artificial reefs over long timescales to capture individual, spatial, and temporal variability in reef fish movement.

Growth and foraging behavior of hatchery propagated long-spined sea urchins, Diadema antillarum: Implications for aquaculture and restocking

Stocking hatchery propagated long-spined sea urchins Diadema antillarum is a priority option for recovery of this keystone herbivore on Caribbean reefs. However, information on captive culture of D. antillarum is very limited due to historical lack of successful juvenile production from gametes in the hatchery. In this study, hatchery propagated D. antillarum juveniles were cultured using two diets, commercially available herbivore pellets and dried nori, with the presence/absence of stony coral Acropora cervicornis skeleton to understand how diet and habitat complexity affect growth and behavior of juveniles. Juvenile urchin growth, and the diel pattern of feeding and foraging behavior were significantly affected by diet type. Juveniles fed dried nori gained significantly higher live weight and test diameter than those fed herbivore pellets. Juvenile urchins displayed nocturnal feeding and foraging behavior irrespective of diet types and presence/absence of coral structure. Presence/absence of coral structure did not affect growth and diel pattern of feeding and foraging behavior, but modulated habitat usage patterns. Survival of juveniles was neither affected by diet types nor the presence/absence of coral structure. This study concludes that dried nori is a superior diet to herbivore pellets for juvenile urchin culture. Since the presence of coral structure influenced habitat usage patterns, provision of rugose structure in captivity has the potential to convey the innate shelter seeking behavior of juvenile urchins.

Nesting and post‐fledging predation risk influence diel patterns of songbird fledging

Among stages of avian ontogeny, the act of nest departure or fledging is an abrupt transition into a new environment and a major leap toward independence for offspring. In altricial birds, the timing (i.e. time of day) of fledging is notable in that many species tend to fledge early in the morning. Past studies have proposed nest predation as a key factor driving birds to fledge earlier in the morning (the ‘survival hypothesis’), whereby offspring avoid peak times of nest predation that occur later in the day. A natural extension of this hypothesis is the predation of offspring post‐fledging, whereby offspring are also timing their fledging with future survival prospects outside of the nest. However, few studies have investigated fledging behaviour in the context of both nesting and post‐fledging predation. To help fill this knowledge gap, we investigated factors driving the timing and duration of fledging across six songbird species in the context of offspring predation: daily nest mortality, post‐fledging mortality and diel patterns of nest predation risk. We found that &gt; 60% of songbirds fledged early in the morning, whereas the peaks in nest predation risk occurred several hours post‐fledging. Furthermore, species under greater risk of nest predation fledged earlier in the day and in closer succession to their siblings. Parameters of post‐fledging mortality were poor predictors of fledging timing, but individuals from broods of species under higher risk of post‐fledging mortality fledged in closer succession to their siblings. These results provide evidence in support of the survival hypothesis, and suggest that songbirds fledge in the morning to avoid peak times of nest predation risk that occur later in the day (~ 8 h after civil dawn). Such results corroborate past research highlighting predation on dependent offspring as a key factor driving variation in life histories across animal taxa; however, estimates of post‐fledging mortality suggest that nest predation alone does not fully explain variation in fledging behaviour among species. Future research is therefore needed to investigate the contribution of other factors, such as energetics, parent–offspring conflict and diel patterns of post‐fledging survival, which may help to mediate diel patterns of fledging within and among songbird species.

Who is adjusting to whom?: Differences in elephant diel activity in wildlife corridors across different human-modified landscapes

The global impact of increased human activities has consequences on the conservation of wildlife. Understanding how wildlife adapts to increased human pressures with urban expansion and agricultural areas is fundamental to future conservation plans of any species. However, there is a belief that large wild free-ranging carnivores and ungulates, cannot coexist with people, limited studies have looked at wildlife movements through differing human-dominated landscapes at finer spatial scales, in Africa. This information is vital as the human population is only going to increase and the wildlife protected areas decrease. We used remote-sensor camera traps to identify the movement patterns of African elephant (Loxodonta africana) through six wildlife corridors in Botswana. The wildlife corridors were located in two different human-dominated landscapes (agricultural/urban), with varying degrees of human impact. While we found that elephants use corridors in both landscapes, they use the urban corridors both diurnally and nocturnally in contrast to agricultural corridors which were only nocturnal. Our results provide evidence for temporal partitioning of corridor use by elephants. We identified that seasonality and landscape were important factors in determining the presence of elephants in the corridors. Our findings demonstrate that elephant diel patterns of use of the wildlife corridor differs based on the surrounding human land-uses on an hourly basis and daily basis, revealing potential adaptation and risk avoidance behaviour.

Diel Rhythm and Thermal Independence of Metabolic Rate in a Benthic Shark.

Biological rhythms that are mediated by exogenous factors, such as light and temperature, drive the physiology of organisms and affect processes ranging from cellular to population levels. For elasmobranchs (i.e. sharks, rays, and skates), studies documenting diel activity and movement patterns indicate that many species are crepuscular or nocturnal in nature. However, few studies have investigated the rhythmicity of elasmobranch physiology to understand the mechanisms underpinning these distinct patterns. Here, we assess diel patterns of metabolic rates in a small meso-predator, the epaulette shark (Hemiscyllium ocellatum), across ecologically relevant temperatures and upon acutely removing photoperiod cues. This species possibly demonstrates behavioral sleep during daytime hours, which is supported herein by low metabolic rates during the day and a 1.7-fold increase in metabolic rates at night. From spring to summer seasons, where average average water temperature temperatures for this species range 24.5 to 28.5 °C, time of day, and not temperature, had the strongest influence on metabolic rate. These results indicate that this species, and perhaps other similar species from tropical and coastal environments, may have physiological mechanisms in place to maintain metabolic rate on a seasonal time scale regardless of temperature fluctuations that are relevant to their native habitats.

Acoustic signalling and behaviour of Antarctic minke whales (Balaenoptera bonaerensis).

Acoustic signalling is the predominant form of communication among cetaceans. Understanding the behavioural state of calling individuals can provide insights into the specific function of sound production; in turn, this information can aid the evaluation of passive monitoring datasets to estimate species presence, density, and behaviour. Antarctic minke whales are the most numerous baleen whale species in the Southern Ocean. However, our knowledge of their vocal behaviour is limited. Using, to our knowledge, the first animal-borne audio-video documentation of underwater behaviour in this species, we characterize Antarctic minke whale sound production and evaluate the association between acoustic behaviour, foraging behaviour, diel patterns and the presence of close conspecifics. In addition to the previously described downsweep call, we find evidence of three novel calls not previously described in their vocal repertoire. Overall, these signals displayed peak frequencies between 90 and 175 Hz and ranged from 0.2 to 0.8 s on average (90% duration). Additionally, each of the four call types was associated with measured behavioural and environmental parameters. Our results represent a significant advancement in understanding of the life history of this species and improve our capacity to acoustically monitor minke whales in a rapidly changing Antarctic region.

Keeping time in the dark: Potato diel and circadian rhythmic gene expression reveals tissue-specific circadian clocks.

The circadian clock is an internal molecular oscillator and coordinates numerous physiological processes through regulation of molecular pathways. Tissue‐specific clocks connected by mobile signals have previously been found to run at different speeds in Arabidopsis thaliana tissues. However, tissue variation in circadian clocks in crop species is unknown. In this study, leaf and tuber global gene expression in cultivated potato under cycling and constant environmental conditions was profiled. In addition, we used a circadian‐regulated luciferase reporter construct to study tuber gene expression rhythms. Diel and circadian expression patterns were present among 17.9% and 5.6% of the expressed genes in the tuber. Over 500 genes displayed differential tissue specific diel phases. Intriguingly, few core circadian clock genes had circadian expression patterns, while all such genes were circadian rhythmic in cultivated tomato leaves. Furthermore, robust diel and circadian transcriptional rhythms were observed among detached tubers. Our results suggest alternative regulatory mechanisms and/or clock composition is present in potato, as well as the presence of tissue‐specific independent circadian clocks. We have provided the first evidence of a functional circadian clock in below‐ground storage organs, holding important implications for other storage root and tuberous crops.