Diatom Density Research Articles

Pioneer marine biofilms on artificial surfaces including antifouling coatings immersed in two contrasting French Mediterranean coast sites

Marine biofilm communities that developed on artificial substrata were investigated using molecular and microscopic approaches. Polystyrene, Teflon® and four antifouling (AF) paints were immersed for 2 weeks at two contrasting sites near Toulon on the French Mediterranean coast (Toulon military harbour and the natural protected area of Porquerolles Island). Biofilms comprising bacteria and diatoms were detected on all the coatings. The population structure as well as the densities of the microorganisms differed in terms of both sites and coatings. Lower fouling densities were observed at Porquerolles Island compared to Toulon harbour. All bacterial communities (analysed by PCR-DGGE) showed related structure, controlled both by the sites and the type of substrata. Pioneer microalgal communities were dominated by the same two diatom species, viz. Licmophora gracilis and Cylindrotheca closterium, at both sites, irrespective of the substrata involved. However, the density of diatoms followed the same trend at both sites with a significant effect of all the AF coatings compared to Teflon and polystyrene.

An autumn bloom of diatoms of the genus Pseudo-nitzschia H. Peragallo, 1900 in Amursky Bay, the Sea of Japan

A bloom of potentially toxic diatoms of the genus Pseudo-nitzschia was observed in October–November 2005 in the northeastern part of Amursky Bay in the vicinity of Vladivostok (northeastern Sea of Japan) at a salinity of 31–33.5‰ and a water temperature of 6–12°C. The most intense peak of Pseudo-nitzschia spp. cell density (with a mean value of 1428.9 thousand cells/liter), which was recorded in the second half of October after heavy rains, was mainly caused by the massive development of P. multistriata (67% of the total density) and P. calliantha (9%). A negative correlation was found between Pseudo-nitzschia spp. cell density and water salinity and NH4 concentration; a positive correlation was observed between diatom population density and water temperature.

Temporal distribution of phytoplankton in the south-western Caspian Sea during 2009–2010: a comparison with previous surveys

This study focuses on spatial and temporal distribution and species composition of phytoplankton in the south-western Caspian Sea between July 2009 and March 2010. Samples were collected from 11 stations along three transects: Lisar, Anzali and Sefidrood. Among 44 identified phytoplankton species, diatoms (70.2%) and cyanophytes (25.0%) were dominant. The average phytoplankton abundance was calculated as 1.085E + 05 cells l−1. Among the phytoplankton groups, diatom density was higher (70.2%) than two out of three of total abundance in density of 1.085E + 05 cells l−1. Cyanophytes were the second important group (25.0%) contributing to total phytoplankton. Dinoflagellates, chlorophytes and euglenoids were other contributors to total phytoplankton. DiatomsDactyliosolen fragilissimusandSkeletonema costatumand cyanophyteOscillatoriasp. numerically dominated in the system. There were major changes in phytoplankton composition and average phytoplankton density was higher than those documented in 1996–1997 and 2005. The average concentrations of dissolved inorganic nitrogen (DIN), dissolved inorganic phosphorus (DIP) and dissolved inorganic silicate were 14.5 ± 6.32, 1.14 ± 0.44 and 5.10 ± 3.98 μM, respectively, and these concentrations were strikingly high. Increases in DIN and DIP concentrations were more than twofold compared to recorded values during the last 2 decades due to the eutrophication. Fluctuations in nutrients played an important role in the variation of phytoplankton composition and abundance. Chlorophyll-aconcentrations varied between 3.22 and 16.1 μg l−1and there was a significant increase in chlorophyll-a(8.13 ± 5.72 μg l−1) compared to the values in 1996–1997 (1.44 ± 1.48 μg l−1), 2001 (2.62 ± 1.48 μg l−1) and 2005 (2.14 ±1.94 μg l−1).

Larval settlement and metamorphosis of the mussel Mytilus coruscus in response to natural biofilms

Settlement and metamorphosis of pediveliger larvae of Mytilus coruscus in response to natural biofilms was investigated in the laboratory. Pediveliger larvae settled and metamorphosed in response to biofilms and post-larval settlement and metamorphosis increased with biofilm age. The activity of the biofilm was positively correlated with biofilm age, dry weight, bacterial density and diatom density, but had no apparent relationship with chlorophyll a concentration. The change in bacterial community composition corresponding to biofilm age may explain differences in the age-dependent inducing activities of biofilms, which in turn may play an important role in larval settlement in this species.

The effects of nutrient enrichment on a freshwater meiofaunal assemblage

Summary1. The effects of eutrophication on phytoplankton, zooplankton and fish in lakes are well known. By contrast, little is known about the response of the zoobenthos to nutrient enrichment, while smaller organisms, such as the meiofauna, have for the most part been neglected.2. In a long‐term (16 months) microcosm experiment, we assessed the effects of five levels of nutrients [total phosphorus (TP), 7–250 μg L−1; nitrate, 2–8 mg L−1] on a freshwater meiofaunal assemblage and on nematode diversity in particular.3. Within the first 8 months, meiofaunal succession was only weakly affected, whereas, during the last 4 months, nutrient addition influenced most of the main taxa, with a concomitant change in the assemblage structure.4. The density of the numerically dominant nematodes decreased upon nutrient enrichment, whereas ostracods became more numerous. Other taxa, including copepods, reached a maximum at intermediate nutrient levels or, in case of oligochaetes, were almost unaffected by nutrient enrichment. However, the changes in the density of the main taxa were usually insufficient to alter their biomass. Consequently, meiofaunal biomass was remarkably unresponsive to nutrient addition, while meiofaunal density displayed a unimodal relationship, with a peak at a TP concentration of 30 μg L−1. In addition, nematode species richness decreased significantly with increasing nutrient concentrations.5. We hypothesise that the response of meiofaunal taxa to nutrients is attributable to the development of primary producers, which shifted with enrichment from low densities of edible diatoms and unicellular green algae to large standing stocks of inedible forms, such as Lemna minor and Cladophora spp.

Responses and structural recovery of periphytic diatom communities after short-term disturbance in some rivers (Hanoi, Vietnam)

Field transfer experiments of periphytic diatom assemblages developed on artificial substrates were set up to assess the responses of those communities to environmental disturbances. The glass slides were positioned for colonization at the relatively unpolluted site (Red, in the Red River) and at the heavily polluted site (TL, in the To Lich River) in the beginning of the experiment. After a period of 2 weeks, the colonized glass slides were concomitantly transferred from the unpolluted Red site to the heavily polluted TL site and to the moderate polluted site (NT2, in the Nhue River) and, conversely, from the TL site to the Red site, and then to the NT2 site. The responses and the adapting capacity of periphytic diatom communities to environmental changes were assessed through the cell density, diversity index, species richness, taxonomic composition, and diatom indices after 2 and 4 weeks of transfer periods. For all transfers except for the transfer from the Red to the TL site in which the growth inhibition of diatom cells was found, the diatom density significantly increased until the end of the experiment. Thus, the diatom communities have expressed their pollution tolerance or sensitivities by changing their composition to adapt themselves to environmental changes. Characteristic species of the Red site (Gyrosigma scalproides, Navicula recens) were replaced by Nitzschia palea, Nitzschia umbonata, Aulacoseira granulate typical species of the NT2 site, in the biofilm transferred from the Red site to the NT2 site. The relative abundances of typical diatom species of the Red site proliferated in the biofilm transferred from the TL site to the Red site. The replacement of periphytic diatom communities appeared after the transfer from the second week at the different sites. The slow shift of the species towards the typical species at the TL site could result from the organized structure of diatoms within biofilm before the transfer from the Red site to the TL site. The shifts in values of the Index of Specific Polluosensitivity and Diatom Assemblage Index to organic pollution throughout the experiment indicated the clear sensitivity of these indices to water quality changes.

CULTURE CONDITIONS INFLUENCE THE GROWTH DYNAMICS AND THE PRODUCTION OF COCCONEIS SCUTELLUM (BACILLARIOPHYTA)(1).

The optimal conditions for the growth of two conspecific benthic diatoms were defined through factorial experimentation. We investigated the roles of light spectrum, nutrient availability, and culture conditions on the laboratory production of Cocconeis scutellum scutellum Ehrenb. and C. scutellum parva Grunow. Diatoms were cultivated in petri dishes, and inverted optical microscopy was used to periodically record their abundance. Growth curves were constructed from these data for each culture condition. In addition, at the end of the experiment we performed weight measurements to determine the total production for each of the considered conditions. We found that cultivation in nonsealed (NS) petri dishes (permitting gas exchange) represented the most productive technique. Cell density and biomass varied among light spectra, although this effect was inconsistent. For example, the Sylvania Gro-Lux lamp (GL) produced the lowest cell density but highest biomass, suggesting that it may promote the production of larger cells. Surprisingly, of the culture media tested, f/2 (a media commonly used for the culture of diatoms) was the least productive. Diatom density and biomass were variably dependent on the combination of experimental culture conditions and strain used. These physical and chemical factors act mainly on given features of the diatom growth curve. These results permitted us to devise adequate culture protocols, to produce a biotechnologically important substance: a proapoptotic compound that specifically destroys the androgenic gland of a shrimp and could find novel applications in human medicine.

Distribution patterns of benthic diatoms during summer in the Niyang River, Tibet, China

The aim of this study was to investigate the distribution, density, community structure and biodiversity characteristics of benthic diatoms, and to analyze whether differences in species composition and abundance exist in different regions of the Niyang River, Tibet. Among the 157 taxa observed in 15 sampling sites in the main river and tributary, most were casual species (>100), the relative abundance of the genera Achnanthes and Fragilaria was 67% of the total relative abundance. Achnanthes minutissima was the most important species and dominated the whole river reaches (average relative abundance was 30%); the average diatom densities were 7.4 x 10(5) cell/cm(2) at all sites, and increased slowly from the upper section to downriver. The significant indicator taxa with higher relative abundance were Achnanthes biasolettiana (18.0%) and Fragilaria arcus (18.2%), Fragilaria capucina var. vaucheriae (31.2%), Fragilaria construens var. venter (11.3%) and Cymbella affinis (11.0%) in the upper, tributary and mid-river sections, respectively. Achnanthes minutissima was the most abundant species (56%) in the downriver section. Biodiversity indices showed a gradual decrease from the up-to down-river section, and dominant species were more abundant in the upper and mid-river sections than in the downriver section. A two-way indictor species analysis (TWINSPAN) of diatom composition clearly showed four different groups, namely the upper, mid, lower and tributary sections. Detrended correspondence analysis (DCA) supported the results of TWINSPAN, and the characteristics of site distribution and species composition in the Niyang River supported the spatial structure of diatom assemblages. This study indicates that bio-assessment programs utilizing benthic diatoms could clearly benefit lotic water with regional stratification.

Inhibition of marine biofouling by bacterial quorum sensing inhibitors

Seventy eight natural products from chemical libraries containing compounds from marine organisms (sponges, algae, fungi, tunicates and cyanobacteria) and terrestrial plants, were screened for the inhibition of bacterial quorum sensing (QS) using a reporter strain Chromobacterium violaceum CV017. About half of the natural products did not show any QS inhibition. Twenty four percent of the tested compounds inhibited QS of the reporter without causing toxicity. The QS inhibitory activities of the most potent and abundant compounds were further investigated using the LuxR-based reporter E. coli pSB401 and the LasR-based reporter E. coli pSB1075. Midpacamide and tenuazonic acid were toxic to the tested reporters. QS-dependent luminescence of the LasR-based reporter, which is normally induced by N-3-oxo-dodecanoyl-L-homoserine lactone, was reduced by demethoxy encecalin and hymenialdisin at concentrations >6.6 μM and 15 μM, respectively. Hymenialdisin, demethoxy encecalin, microcolins A and B and kojic acid inhibited responses of the LuxR-based reporter induced by N-3-oxo-hexanoyl-L-homoserine lactone at concentrations >0.2 μM, 2.2 μM, 1.5 μM, 15 μM and 36 μM, respectively. The ability to prevent microfouling by one of the compounds screened in this study (kojic acid; final concentrations 330 μM and 1 mM) was tested in a controlled mesocosm experiment. Kojic acid inhibited formation of microbial communities on glass slides, decreasing the densities of bacteria and diatoms in comparison with the control lacking kojic acid. The study suggests that natural products with QS inhibitory properties can be used for controlling biofouling communities.

The development of marine biofilms on two commercial non-biocidal coatings: a comparison between silicone and fluoropolymer technologies

The antimicrobial performance of two fouling-release coating systems, Intersleek 700® (IS700; silicone technology), Intersleek 900® (IS900; fluoropolymer technology) and a tie coat (TC, control surface) was investigated in a short term (10 days) field experiment conducted at a depth of ca 0.5 m in the Marina Bandar Rawdha (Muscat, Oman). Microfouling on coated glass slides was analyzed using epifluorescence microscopy and adenosine-5′-triphosphate (ATP) luminometry. All the coatings developed biofilms composed of heterotrophic bacteria, cyanobacteria, seven species of diatoms (2 species of Navicula, Cylindrotheca sp., Nitzschia sp., Amphora sp., Diploneis sp., and Bacillaria sp.) and algal spores (Ulva sp.). IS900 had significantly thinner biofilms with fewer diatom species, no algal spores and the least number of bacteria in comparison with IS700 and the TC. The ATP readings did not correspond to the numbers of bacteria and diatoms in the biofilms. The density of diatoms was negatively correlated with the density of the bacteria in biofilms on the IS900 coating, and, conversely, diatom density was positively correlated in biofilms on the TC. The higher antifouling efficacy of IS900 over IS700 may lead to lower roughness and thus lower fuel consumption for those vessels that utilise the IS900 fouling-release coating.

Particle Size Measurement of Diatoms with Inference of Their Properties: Comparison of Three Techniques

Abstract Diatom-rich sediments are common in several oceanic regions, especially the Southern Ocean. Some of these are strongly affected by bottom currents and are expected to be sorted by the flow. Examination of data on diatoms’ response by instruments commonly used for size measurement is presented here. Diatoms are silt- to fine sand-size, filigree silica structures of many shapes with high porosity, thus both the bulk density and shape strongly influence the “size” that is calculated from measurements. We document the particle size of diatoms measured by instruments based on settling velocity (Sedigraph), electrical resistance pulse counting (Coulter counter), and laser diffraction (Malvern laser sizer). The Malvern laser consistently measures the largest diameters, followed by the Coulter counter and then settling-based techniques. Relationships between these inferred sizes (all expressed as quartz-equivalent spherical diameters) have implications for the physical properties of diatom tests. Earlier work has demonstrated that laser diffraction responds to the particles’ external projected area. The effects of both low effective density and irregular shape of diatoms (compared with terrigenous grains) on their settling velocity causes the Sedigraph to indicate relatively small diameters. Shape effects are less pronounced for quasi-spherical diatom species. The Coulter counter records the diatoms’ solid volume and is relatively unaffected by their density or shape. The measurement of different physical parameters by these instruments offers a basis for estimation of diatom porosity (fluid-occupied volume within the test). Measurements of the external diameter and solid volume allow estimates of porosity Φ. For (laser) sizes > 20 μm this is Φ = 75–95%, which can be quite well modeled as a perforated spherical shell of wall thickness ~ 1–1.5 μm. For paleocurrent interpretations, a settling-based technique makes Sedigraph measurements of particle size the most useful, but the visual size is best given by laser.

Seasonal phytoplankton dynamics in extreme southern South America (Beagle Channel, Argentina)

The phytoplankton biomass and composition dynamics in relation with environmental factors were explored during an annual cycle (July 2006–2007) for the first time in the Beagle Channel. Samples were examined by light and scanning electron microscopy and carbon biomass was estimated using measured cell biovolumes. The annual cycle was characterized by a sharp contrast between low density and biomass during the autumn–winter period and a significant increase during spring and summer. The maximum biomass peak was observed during early spring (141 μg C l − 1 and 8.7 μg Chl a l − 1 ) and was associated with a bloom of the diatom genus Chaetoceros. In spite of a strong nutrient depletion that lead to the subsequent bloom decline, a second peak of biomass was observed after 2 weeks, mainly represented by the diatoms T. mendiolana and T. anguste-lineata. Towards the end of spring and during summer diatom density decreased and assemblages were enriched by unidentified tiny phytoflagellates and dinoflagellates. A total of 138 taxa were identified during the study period. From these, 10 are known as potentially toxic species: Alexandrium catenella, A. ostenfeldii, A. tamarense, Dinophysis acuminata, D. rotundata, Prorocentrum cordatum, Pseudo-nitzschia australis, P. calliantha, P. fraudulenta and P. cf. seriata. Their presence is noteworthy since the area sustains a growing aquiculture production.

Top-down control inhibits spatial self-organization of a patterned landscape

Regular, self-organized spatial patterns in primary producers have been described in a wide range of ecosystems and are predicted to affect community production and resilience. Although consumers are abundant in most systems, the effect of trophic interactions on pattern formation in primary producers remains unstudied. We studied the effects of top-down control by herbivores on a self-organized landscape of regularly spaced, diatom-covered hummocks alternating with water-filled hollows on an intertidal mudflat in The Netherlands. Spatial patterns developed during spring but were followed by a rapid collapse in summer, leading to a flat landscape with low diatom densities and little variation in sediment bed level. This dramatic decline co-occurred with a gradual increase of benthic herbivores. A manipulative field experiment, where benthic herbivores were removed from the sediment, revealed that both diatom growth and hummock formation were inhibited by the activity of benthic herbivores. Our study provides clear evidence of top-down control of spatial self-organized patterns by benthic herbivores within a biological-geomorphic landscape.

Influence of environmental factors on the life cycle and morphology of Artemia salina (Crustacea: Anostraca) in Sabkhet El Adhibet (SE Tunisia)

Influence of environmental factors on the life cycle and morphology of Artemia salina (Crustacea: Anostraca) in Sabkhet El Adhibet (SE Tunisia) This study was aimed to examine in greater detail the influence of selected environmental factors on the life cycle and morphological characteristics of the brine shrimp Artemia salina (Linnaeus, 1758). During this follow-up, from November 2005 to April 2006 and from November 2006 to April 2007, Sabkhet El Adhibet (southeast Tunisia: 33°07'7.58"N, 11°24'8.69"E) was surveyed monthly to determine the impact of water salinity, temperature, pH, dissolved oxygen, and phytoplankton density and community structure on Artemia density, population structure, reproductive mode, and total offspring. Strong correlations were found between physicochemical parameters of water and Artemia reproduction characteristics. In contrast, no significant relationship was detected between physicochemical variables and Artemia population structure and density. Further, there were no correlations between phytoplankton density and the Artemia life cycle. Moreover, we observed relationships between physicochemical parameters and all morphological characteristics, especially between the width of 3rd abdominal segment and salinity (rxy = 0.96), temperature (rxy = 0.73), pH (rxy = -0.77) and oxygen (rxy = -0.92) for male specimens, and between the length of the furca and both salinity (rxy = -0.76) and dissolved oxygen (rxy = 0.74), and between the maximal diameter of compound eyes and temperature (rxy = -0.56) for female specimens. Principal component analysis (PCA) shows that male and female specimens collected at different environmental conditions converge, which explains the morphological similarity between them according to salinity, temperature, and dissolved oxygen concentration as well as total phytoplankton, diatom, cryptophyte, and dinophyte density.

Littoral diatoms as indicators of recent water and sediment contamination by metals in lakes

We studied the response of benthic diatoms to recent metal contamination in littoral cores collected at 25 sites in 11 lakes situated at different distances from a smelter in the Rouyn-Noranda mining region (Quebec). Diatom response was described in terms of density, diversity, and taxonomic composition of the entire assemblages and as abundance of individual indicator taxa. Metal concentrations were measured in sediment and in the overlying water (as total dissolved and as free-ions). Sediment metal contamination was significantly higher in lakes located <10 km from the smelters than in lakes farther away. Such difference was not significant when metal concentrations in the overlying water were considered. Metal contamination did not affect diatom density, which indeed was highest in the most contaminated lake. Diversity (either measured as number of taxa or as Shannon and evenness indices) was instead significantly higher in lakes close to the smelter than elsewhere. Redundancy analysis indicated that diatom composition changed along a gradient in alkalinity (CO₃) and one in sediment metal contamination (Cd, Hg, Cu). We identified three diatom taxa (Fragilaria construens var. venter, F. construens var. pumila, and Brachysira vitrea) that increased in relative and absolute abundance with metal contamination. Benthic diatom responses at the community (density, diversity, assemblage composition) and population levels (abundance of selected benthic taxa) were stronger to the sediment metal contamination than to the contamination of overlying water. Comparisons with available literature indicated that, for monitoring recent sediment contamination, diatoms in littoral sediments are preferable to invertebrates that mostly respond to overlying water. Diatoms in littoral cores are therefore unique as tools for monitoring recent contamination of lake sediments.

Benthic diatom communities from two salt marshes of the St. Lawrence Estuary (Canada)

Microphytobenthic diatom communities were investigated in the high and low sections of two salt marshes of the Lower St. Lawrence Estuary (eastern Canada): one featuring a sandy low marsh zone (Pointe-aux-Épinettes; PE) and one with a muddy low marsh area (Pointe-au-Père; PP). Based on diatom composition and diversity, bacterial abundance, chlorophyll-a, phaeopigments and geochemical analyses (Corg, Ntot, granulometry, extracellular polymeric substances), the PP high marsh area appeared to be singular compared to the other sampling sites. Estimated surface biomass ranged from 11 to 71 g C•m-2 in the PE marsh and from 24 to 486 g C•m-2 in the PP marsh. A higher diversity of diatom species was observed in the PP high marsh area with a dominance of epipelic forms, in opposition to the dominant epipsammic forms at the other sites. Statistical analyses showed that diatom density was mainly affected by nutrient availability while the relative abundance of epipelic and epipsammic species was related to sediment grain size. This study provides original data on the composition of benthic diatoms in surface sediments in St. Lawrence saltmarshes during summer time that represent the first step to the determination of the DBI (Diatom biological index) of these northern environments.

Causes and biogeochemical implications of regional differences in silicification of marine diatoms

Diatoms facilitate the export of organic carbon and associated nutrient elements in the ocean because their dense opaline silica shells provide ballast to sinking particles. Marine ecosystem models generally assume that cellular silicification is either constant or varies solely due to physiological responses. Using a cell‐specific technique, synchrotron‐based X‐ray fluorescence (SXRF) microscopy, we show that diatom cells in the cold, high‐silicic‐acid waters of the Antarctic Zone of the Southern Ocean (SOAZ) had 6 times more Si per volume than did those inhabiting the warm, low‐silicic‐acid waters of eastern equatorial Pacific (EEP). Ratios of Si:P and Si:S differed less than this because cellular P and S concentrations were higher in SOAZ cells. Resulting differences in excess density and frustule surface area‐to‐volume ratios should result in more efficient removal and slower dissolution of biogenic silica in the SOAZ compared to the EEP. Moreover, the difference between the excess densities of diatoms and nondiatoms was 15‐fold greater in the SOAZ than in the EEP. Several possible causes of the regional differences in silicification are evaluated. Differences in cell volume between regions and additions of silicic acid and iron had minor effects on silicification. Instead, cellular silicification varied substantially among diatom morphological types within each region, suggesting that community composition largely determined the community silicification in these regions. We suggest that ecological processes may cause much larger systematic regional and temporal differences in cellular stoichiometry than is currently accommodated by ecosystem models.

Is Settlement ofHaliotis irisLarvae on Coralline Algae Triggered by the Alga or Its Surface Biofilm?

ABSTRACT Abalone larvae settle (attach and metamorphose) in response to crustose coralline algae (CCA), but it is not known whether the settlement cues arise from the CCA or from microbes on their surface. The CCA Phymatolithon repandum induced close to 100% metamorphosis of Haliotis iris larvae. Pebbles and shells with a biofilm but without visible macroalgae induced, on average, 58% metamorphosis on H. iris larvae within 2 days, and biofilms are commonly used to cue settlement in H. iris hatcheries. This suggests that settlement on P. repandum might be triggered by the surface biofilm rather than the CCA itself. Treatment of P. repandum with antibiotics, germanium dioxide, and scrubbing did not significantly reduce settlement of H. iris larvae. Diatom strains isolated from P. repandum induced little attachment or metamorphosis at the low diatom densities (103–104 cells/cm2) found on P. repandum, but induced moderate attachment (30–85% after 4 days) and metamorphosis (2–40%) at high densities (5 × 104-1 ...

Rotating disk electrodes to assess river biofilm thickness and elasticity

The present study examined the relevance of an electrochemical method based on a rotating disk electrode (RDE) to assess river biofilm thickness and elasticity. An in situ colonisation experiment in the River Garonne (France) in August 2009 sought to obtain natural river biofilms exhibiting differentiated architecture. A constricted pipe providing two contrasted flow conditions (about 0.1 and 0.45 m s−1 in inflow and constricted sections respectively) and containing 24 RDE was immersed in the river for 21 days. Biofilm thickness and elasticity were quantified using an electrochemical assay on 7 and 21 days old RDE-grown biofilms (t7 and t21, respectively). Biofilm thickness was affected by colonisation length and flow conditions and ranged from 36 ± 15 μm (mean ± standard deviation, n = 6) in the fast flow section at t7 to 340 ± 140 μm (n = 3) in the slow flow section at t21. Comparing the electrochemical signal to stereomicroscopic estimates of biofilms thickness indicated that the method consistently allowed (i) to detect early biofilm colonisation in the river and (ii) to measure biofilm thickness of up to a few hundred μm. Biofilm elasticity, i.e. biofilm squeeze by hydrodynamic constraint, was significantly higher in the slow (1300 ± 480 μm rpm1/2, n = 8) than in the fast flow sections (790 ± 350 μm rpm1/2, n = 11). Diatom and bacterial density, and biofilm-covered RDE surface analyses (i) confirmed that microbial accrual resulted in biofilm formation on the RDE surface, and (ii) indicated that thickness and elasticity represent useful integrative parameters of biofilm architecture that could be measured on natural river assemblages using the proposed electrochemical method.

Species composition and biogeography of diatoms in antarctic and subantarctic (Argentine shelf) waters (37–76°S)

A large spatial scale study of the diatom species inhabiting waters from the subantarctic (Argentine shelf) to antarctic was made for the first time in order to understand the relationships between these two regions with regard to the fluctuations in diatom abundances in relation with environmental features, their floristic associations and the effect of the Polar Front as a biogeographic barrier. Species-specific diatom abundance, nutrient and chlorophyll- a concentration were assessed from 64 subsurface oceanographic stations carried out during the austral summer 2002, a period characterized by an anomalous sea-ice coverage corresponding to a “warm year”. Significant relationships of both diatom density and biomass with chlorophyll- a (positive) and water temperature (negative) were found for the study area as a whole. Within the Subantarctic region, diatom density and biomass values were more uniform and significantly (in average: 35 and 11 times) lower than those of the Antarctic region, and did not correlate with chlorophyll- a. In antarctic waters, instead, biomass was directly related with chlorophyll- a, thus confirming the important contribution of diatoms to the Antarctic phytoplanktonic stock. A total of 167 taxa were recorded for the entire study area, with Chaetoceros and Thalassiosira being the best represented genera. Species richness was maximum in subantarctic waters (46; Argentine shelf) and minimum in the Antarctic region (21; Antarctic Peninsula), and showed a significant decrease with latitude. Floristic associations were examined both qualitatively (Jaccard Index) and quantitatively (correlation) by cluster analyses and results allowed differentiating a similar number of associations (12 vs. 13, respectively) and two main groups of stations. In the Drake Passage, the former revealed that the main floristic change was found at the Polar Front, while the latter reflected the Southern ACC Front as a main boundary, and yielded a higher number of isolated sites, most of them located next to different Antarctic islands. Such differences are attributed to the high relative density of Fragilariopsis kerguelensis in Argentine shelf and Drake Passage waters and of Porosira glacialis and species of Chaetoceros and Thalasiosira in the Weddell Sea and near the Antarctic Peninsula. From a total of 84 taxa recorded in antarctic waters, only 17 were found exclusively in this region, and the great majority (67) was also present in subantarctic waters but in extremely low (<1 cell l −1) concentrations, probably as a result of expatriation processes via the ACC–Malvinas Current system. The present results were compared with those of previous studies on the Antarctic region with respect to both diatom associations in regular vs. atypically warm years, and the distribution and abundance of some selected planktonic species reported for surface sediments.