Desulfovibrio Desulfuricans Research Articles

Photoelectron-promoted metabolism of sulphate-reducing microorganisms in substrate-depleted environments.

Sulphate-reducing microorganisms, or SRMs, are crucial to organic decomposition, the sulphur cycle, and the formation of pyrite. Despite their low energy-yielding metabolism and intense competition with other microorganisms, their ability to thrive in natural habitats often lacking sufficient substrates remains an enigma. This study delves into how Desulfovibrio desulfuricans G20, a representative SRM, utilizes photoelectrons from extracellular sphalerite (ZnS), a semiconducting mineral that often coexists with SRMs, for its metabolism and energy production. Batch experiments with sphalerite reveal that the initial rate and extent of sulphate reduction by G20 increased by 3.6 and 3.2 times respectively under light conditions compared to darkness, when lactate was not added. Analyses of microbial photoelectrochemical, transcriptomic, and metabolomic data suggest that in the absence of lactate, G20 extracts photoelectrons from extracellular sphalerite through cytochromes, nanowires, and electron shuttles. Genes encoding movement and biofilm formation are upregulated, suggesting that G20 might sense redox potential gradients and migrate towards sphalerite to acquire photoelectrons. This process enhances the intracellular electron transfer activity, sulphur metabolism, and ATP production of G20, which becomes dominant under conditions of carbon starvation and extends cell viability in such environments. This mechanism could be a vital strategy for SRMs to survive in energy-limited environments and contribute to sulphur cycling.

Effect of flavin adenine dinucleotide (FAD) on Desulfovibrio desulfuricans corrosion of pipeline welded joint

The impact of Flavin adenine dinucleotide (FAD) on sulfate-reducing bacteria (SRB) corrosion of a pipeline welded joint (WJ) was investigated under anaerobic condition in this paper. The results showed that the thickness of the corrosion product on heat affected zone (HAZ) was lower than that on base metal (BM) and welded zone (WZ), and the FAD addition enhanced the development of the protruding microbial tubercles on the WJ. The local corrosion degrees of the BM and WZ coupons were significantly higher than that of the HAZ coupon. Besides, the FAD addition simultaneously promoted local corrosion of all three zones of the WJ in the SRB inoculated environment, and the promotion role was much more pronounced on the WZ coupons. The selective promotion effect of FAD on SRB corrosion in the WJ was attributed to the special structure of the WZ, the selected SRB attachment and the FAD/FADH2 redox feedback cycle.

Correlation between intracellular electron transfer and gene expression for electrically conductive pili in electroactive bacteria during anaerobic digestion with ethanol

Ethanol feeding has been widely documented as an economical and effective strategy for establishing direct interspecies electron transfer (DIET) during anaerobic digestion. However, the mechanisms involved are still unclear, especially on correlation between intracellular electron transfer in electroactive bacteria and their gene expression for electrically conductive pili (e-pili), the most essential electrical connection component for DIET. Upon cooling from room temperature, the conductivity of digester aggregates with ethanol exponentially increased by an order of magnitude (from 45.5 to 125.4 μS/cm), whereas which with its metabolites (acetaldehyde [from 40.5 to 54.4 μS/cm] or acetate [from 32.1 to 50.4 μS/cm]) did not increase significantly. In addition, the digester aggregates only with ethanol were observed with a strong dependence of conductivity on pH. Metagenomic and metatranscriptomic analysis showed that Desulfovibrio desulfuricans was the most dominant and metabolically active bacterium that contained and highly expressed the genes for e-pili. Abundance of genes encoding the total type IV pilus assembly proteins (6.72E-04 vs 1.24E-03, P < 0.05), PilA that determined the conductive properties (2.22E-04 vs 2.44E-04, P > 0.05), and PilB that proceeded the polymerization of pilin (1.56E-04 vs 3.52E-03, P < 0.05) with ethanol was lower than that with acetaldehyde. However, transcript abundance of these genes with ethanol was generally higher than that with acetaldehyde. In comparison to acetaldehyde, ethanol increased the transcript abundance of genes encoding the key enzymes involved in NADH/NAD+ transformation on complex I and ATP synthesis on complex V in intracellular electron transport chain. The improvement of intracellular electron transfer in D. desulfuricans suggested that electrons were intracellularly energized with high energy to activate e-pili during DIET.

Unlocking the bioremediation potential of adapted Desulfovibrio desulfuricans in acidic low-temperature U-contaminated groundwater

Addressing the global challenge of uranium (U)-contaminated groundwater requires innovative bioremediation strategies. This study investigates Desulfovibrio desulfuricans, a neutrophilic and mesophilic sulfate-reducing bacteria (SRB) strain optimized for low-temperature (15 °C) and acidic (initial pH 4) conditions, to validate its bioaugmentation potential for uranium decontamination in groundwater. Our research aimed to assess its efficacy in treating U-contaminated groundwater and elucidate the optimal growth conditions for this strain in acidic and sulfate-enriched environments. We found that D. desulfuricans was phylogenetically distinct from the native microbial community in acidic U-contaminated groundwater, while it maintained appreciable activity in sulfate reduction under contaminated groundwater conditions after accumulation. Acid-tolerant D. desulfuricans removed 75.87 % of uranium and 30.64 % of sulfate from acidic U-contaminated groundwater (pH 4.0) at 15 °C within 14 days. Furthermore, we explored the optimal sulfate concentration for bacterial growth, which was found to be 2000 mg/L, and an elevated Fe2+ concentration from 100 to 1000 mg/L increasingly stimulated sulfate-reducing activity. These findings provide a novel insight into the application of neutrophilic and mesophilic SRB in bioremediation of acidic and low-temperature groundwater after accumulation and underscore the feasibility of bioremediation by using exogenously pure SRB.

Bacteremia caused by Desulfovibrio desulfuricans with the intestinal tract as the portal of entry: two case reports and a literature review

BackgroundDesulfovibrio desulfuricans (D. desulfuricans), a commensal anaerobic gram-negative rod endemic to the soil environment and human gastrointestinal tract, rarely causes bloodstream infections. We report two rare cases of bacteremia caused by D. desulfuricans in which the intestinal tract was the portal of entry. In addition, we summarize findings on D. desulfuricans.Case presentationCase 1: A 51-year-old man presented to the emergency department with the chief complaints of fever and right lower abdominal pain. He was admitted to the hospital with ascending colonic diverticulitis and received empirical antibacterial therapy with piperacillin/tazobactam. Blood culture revealed D. desulfuricans. The patient was discharged after 2 weeks of antimicrobial therapy. Case 2: A 95-year-old woman presented to our hospital with a chief complaint of fever. Owing to an elevated inflammatory response and pyuria, the patient was diagnosed with pyelonephritis and treated with ceftriaxone. Klebsiella pneumoniae was detected in her urine culture, while D. desulfuricans was detected in her blood culture. The patient was then treated with ampicillin/sulbactam for 14 days. The fecal occult blood test result was positive, suggesting a colonic mucosal lesion, such as a malignant tumor, may have been the portal of entry for D. desulfuricans bacteremia. Previous literature reviews indicate that D. desulfuricans bacteremia often results from liver or renal abscesses, intestinal lesions, among others, serving as the portal of entry. Although no specific underlying disease has been reported, it is more common in the older population. We encountered two cases of D. desulfuricans bacteremia and combined them with 15 cases from previous studies to explore the characteristics of the disease. The proportion of patients aged \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$\\:\\ge\\:$$\\end{document}60 years was 73.7%; overall, 73.7% had gastrointestinal complications, and 63.2% had abdominal symptoms at the time of presentation.ConclusionsWe encountered two rare cases of D. desulfurican bacteremia. This type of bacteremia is more common in elderly people over 60 years of age and is often associated with hepatobiliary and gastrointestinal diseases.

Desulfovibrio desulfuricans and its derived metabolites confer resistance to FOLFOX through METTL3

Chemoresistance is a critical factor contributing to poor prognosis in clinical patients with cancer undergoing postoperative adjuvant chemotherapy. The role of gut microbiota in mediating resistance to tumour chemotherapy remains to be investigated. Patients with CRC were categorised into clinical benefit responders (CBR) and no clinical benefit responders (NCB) based on chemotherapy efficacy. Differential bacterial analysis using 16S rRNA sequencing revealed Desulfovibrio as a distinct microbe between the two groups. Employing a syngeneic transplantation model, we assessed the effect of Desulfovibrio on chemotherapy by measuring tumour burden, weight, and Ki-67 expression. We further explored the mechanisms underlying the compromised chemotherapeutic efficacy of Desulfovibrio using metabolomics, western blotting, colony formation, and cell apoptosis assays. In comparison, Desulfovibrio was more abundant in the NCB group. Invivo experiments revealed that Desulfovibrio colonisation in the gut weakened the efficacy of FOLFOX. Treatment with Desulfovibrio desulfuricans elevates serum S-adenosylmethionine (SAM) levels. Interestingly, SAM reduced the sensitivity of CRC cells to FOLFOX, thereby promoting the growth of CRC tumours. These experiments suggest that SAM promotes the growth and metastasis of CRC by driving the expression of methyltransferase-like 3 (METTL3). A high abundance of Desulfovibrio in the intestines indicates poor therapeutic outcomes for postoperative neoadjuvant FOLFOX chemotherapy in CRC. Desulfovibrio drives the manifestation of METTL3 in CRC, promoting resistance to FOLFOX chemotherapy by increasing the concentration of SAM. This study is supported by Wuxi City Social Development Science and Technology Demonstration Project (N20201005).

Combining a Commercial Mixer with a Wall-Tube Electrode Allows the Arbitrary Control of Concentrations in Protein Film Electrochemistry.

Protein film electrochemistry is a technique in which an enzyme is immobilized on an electrode in a configuration that allows following the changes in turnover frequency as a response to changes in the experimental conditions. Insights into the reactivity of the enzyme can be obtained by quantitatively modeling such responses. As a consequence, the more the technique allows flexibility in changing conditions, the more useful it becomes. The most commonly used setup, based on the rotating disc electrode, allows easy stepwise increases in the concentration of nongaseous substrates, or exposure to constant concentration of dissolved gas, but does not permit to easily decrease the concentration of nongaseous substrates, or to change the concentration of dissolved gas in a stepwise fashion. To overcome the limitation by mass transport of the substrate toward the electrode when working with fast enzymes, we have designed another kind of electrochemical cell based on the wall-tube electrode (WTE). We demonstrate here that by using a system combining two syringe pumps, a commercial mixer, and the WTE, it is possible to change the concentration of species in a stepwise fashion in all directions, opening new possibilities to study redox enzymes. As a proof of concept, this device was applied to the study of the electrochemical response of the cytochrome c nitrite reductase of Desulfovibrio desulfuricans.

Study on Desulfovibrio desulfuricans mediated copper corrosion and its inhibition using bio-wax of Colocasia esculenta

In the present study, the bio-wax was extracted from Colocasia esculenta and was tested for its corrosion inhibiting property against Desulfovibrio desulfuricans. Inhibition of copper corrosion by bio wax from Colocasia was observed using weight loss method, electrochemical impedance spectroscopy (EIS) and scanning electron microscopy (SEM). Results obtained from the weight loss studies and impedance measurements provided similar trends of inhibition efficiency. Cu coupon coated with bio-wax showed significant reduction in corrosion rate i.e. Rcorr of 0.0011mmpy. This result gives an idea about the protective nature of thick bio-wax coated copper coupons from bacterial adherence and bacterial metabolites. The impedance value in the bio wax coated coupon was found to be from 188.67 to 781.25 ohms at 1 Volt. The wax FTIR analysis in a spectral region of 4000 cm- 1 - 400 cm -1 showed peaks at 2918.75 cm -1 and 2849.73 cm -1 confirming the presence of hydrophobic hydrocarbon. Morphological changes were observed after coating the bio wax as shown from SEM analysis. The incorporation of the hydrophobic property of bio-wax showed sufficient reduction in MIC of copper. Bio-wax acted as a protective covering inhibiting the adherence of corroding bacteria on the surface. Inhibition efficiency results are in good agreement to use Colocasia bio wax as a source of sustainable and renewable surface coating material. This property might be used in future as an ingredient in anti-rust paint used in coating metal surfaces like ship parts, pipelines systems of petroleum industry and other metal made machines etc.

Гуанідінійвмісний олігомер як інгібітор мікробної корозії металу

Guanidinium-containing oligomers, a poorly studied class of organic compounds, have attracted attention due to their bactericidal properties. A guanidinium-containing oligomer based on an aliphatic oligoepoxide is a newly synthesized substance with bactericidal activity, which gives it the prospects for use as a microbial corrosion inhibitor. Aim. The goal of the study was to synthesize oligomeric alkyl substituted guanidinium bromide and study of its anticorrosive properties in the presence of steel under the influence of corrosive active sulfate-reducing bacteria. Methods. The guanidine-containing alkyl substituted oligomer was obtained by the reaction of the aliphatic oligoepoxide DEG-1 with guanidine, followed by interaction with alkyl bromide. The anticorrosive properties of the guanidine-containing oligomer were studied using collection strains of sulfate-reducing bacteria: UCM B-11503 Desulfovibrio sp.10, UCM B-11501 Desulfovibrio desulfuricans DSM642, and UCM B-11502 Desulfovibrio vulgaris DSM644. The sulfate-reducing bacteria were grown on Postgate В medium for 14 days at a temperature of 28 ± 2 °C. The number of bacteria was determined by the method of tenfold dilution. The corrosion rate was determined by the gravimetric method. The physicochemical parameters of pH and redox potential of the bacterial culture liquid were studied by the potentiometric method. The accumulation of hydrogen sulfide in the culture liquid was determined by the iodometric method. Lipolytic activity was studied spectrophotometrically using a KFK-3 device by reaction with p-nitrophenyl palmitate, catalase activity — using 0.03% hydrogen peroxide, which formed a stable colored complex with a 4% molybdenum diphosphate solution. The specific activity of the studied enzymes was expressed as unit ∙ mg-1 protein. Protein was determined in the supernatant by the conventional Lowry method. Results. It was shown that the oligomer based on aliphatic oligoepoxide has biocidal properties. A significant inhibition of the development of sulfate-reducing bacteria (SRB) was observed after the oligomer was added; only dozens of bacterial cells were detected in the medium after the exposure period. The corrosion rate of steel in the presence of SBR without addition of inhibitors was 0.15 — 0.35 mg/cm2∙h. The addition of DPC (a quaternary ammonium compound based on N-decylpyridinium chloride) (Kyiv Polytechnic Institute (KPI), Ukraine) to the culture medium led to a decrease in the steel corrosion rate to 0.032 — 0.047 mg ∙ cm-2 h-1 (by 6.5—10.6 times). In the presence of Armohib CI-28 inhibitor (based on Diamine Ethoxylate) (Akzonobel, Holland), the corrosion rate was reduced to 0.02—0.039 mg ∙ cm-2 h-1 (by 4.2 — 12.7 times). The addition of guanidinium-containing oligomer to the medium with bacteria reduced the corrosion rate to 0.075—0.079 mg/cm2 ∙ h (by 2.5—2.7 times). According to the mass loss of steel samples, the degree of metal protection against microbial corrosion in the presence of guanidinium-containing oligomer was 60.15—63.17%. Conclusions. The obtained data indicate that the guanidinium-containing oligomer based on aliphatic oligoepoxy has biocidal and anticorrosive properties and is promising for use as a means of combating microbially induced corrosion.

Antibacterial and anticorrosion effects of Cetylpyridinium Chloride against Desulfovibrio desulfuricans biofilm and X80 steel corrosion

In this work, corrosion inhibition of X80 steel caused by Cetylpyridinium Chloride (CPC) in the presence of sulfate-reducing bacteria (SRB) was studied. The results showed that SRB accelerated the steel corrosion, whereas CPC had a good antibacterial activity against SRB corrosion. The growth of SRB was significantly inhibited with CPC concentration 10 mg L–1. The addition of 80 mg L–1 reduced the corrosion rate by 80 % in the presence of SRB. Molecular dynamics simulation and adsorption isotherm calculation showed that CPC can be adsorbed on the steel surface to form a protective film to protect steel form corrosion.

Marine tidal corrosion of X80 pipeline steel under federative action of Pseudomonas sp. and Desulfovibrio desulfuricans

In this work, tidal corrosion of X80 steel under the federative action of Desulfovibrio desulfuricans and Pseudomonas sp. was studied. The results indicated that the metabolism of Desulfovibrio desulfuricans and Pseudomonas sp. is affected by bacterial competition and nutrient content. The federative action of Desulfovibrio desulfuricans and Pseudomonas sp. accelerates the steel corrosion in marine tidal environment, but the acceleration effect is slightly lower than that of the independent bacteria. Corrosion rates of the steel increase with the altitude and the experiment time in the federative inoculation tidal environment.

Investigation of the bactericidal-inhibitory property of the reagent in laboratory conditions

The corrosion protection capability of reagent C-1 with bactericidal-inhibitory properties was studied in laboratory conditions in neutral, acidic and alkaline mediums and the concentration of the reagent was in the range of 10-25 mg/l. Desulfomicrobium and desulfovibrio desulfuricans strains of sulphate-reducing bacteria extracted from formation water of oil well no. 1802 of Bibiheybatneft OGPD, SOCAR field were used as the research object. For comparison, reagent free and reagent-based mediums were used in the research process. In laboratory conditions, the effect of reagent C-1 on the incubation period of sulfate-reducing bacteria was investigated for fifteen days in postgate-“B” nutrient medium. It was determined that having a bactericidal property, reagent C-1 affects the life activity of bacteria significantly. It was revealed that the highest bactericidal effect occurs at a concentration of 25 mg/l of reagent C-1 and the effect of corrosion protection from bacteria is 85%.

Desulfovibrio desulfuricans induced corrosion of welded joint in X80 pipeline steel below delaminated coating

Buried pipelines are an important tool for long-distance oil and gas transportation. Welded joints are the weak components of buried pipelines. Interestingly, the biocorrosion degree of the heat affected zone (HAZ) of the welded joint is the lowest in mediums. However, there is no report on the biocorrosion of the welded joints when the protective coating is delaminated. In this paper, sulfate-reducing bacteria (SRB) corrosion of X80 steel welded joint was studied below delaminated coating. Results showed that SRB corrosion of the welded joint was selective at the opening of the delaminated coating, and such selected SRB corrosion gradually faded along the direction from the opening to the far end. At the far end below the delaminated coating, the corrosion of the welded joint was related more to its microstructural characteristics rather than to the SRB metabolism process. The concentration decrease of the SRB cells was responsible for the gradual decrease of the SRB corrosion of the welded joint below the delaminated coating.

Large sulfur isotope fractionation during abiotic consumption of hydrogen sulfide after cessation of bacterial growth in batch culture experiments of sulfate reducing bacteria

Microbial sulfate reduction is a key process in the oceanic sulfur cycle and imparts a large sulfur isotope fractionation. The mechanism of sulfur isotope fractionation during microbial sulfate reduction has been studied from the geochemical and biochemical aspects since the 1950s. Recently, however, the large sulfur isotope fractionation, exceeding 47‰, has been observed in some pure culture experiments of sulfate reducing bacteria and the tentative understanding of microbial sulfur isotope fractionation has not well explained the mechanism. Here we quantified growth phase dependent sulfur isotope fractionation of a type sulfate reducer Desulfovibrio desulfuricans (DSM642) and revealed that the magnitude of isotope fractionation increased from -13.4 ± 3.6‰ in early exponential phase to -65.9 ± 21.0‰ in later exponential phase having clear negative correlation with cell specific sulfate reduction rate. Our results show the importance of cells growth phase and states that control cell specific sulfate reduction rate and sulfur isotope fractionation. Although microbial sulfate reduction likely continued to stationary phase of cells, microbial sulfur isotope fractionation could not be quantified because of the decreasing total dissolved sulfide (ΣH2S: H2S, HS−, and S2−) concentration after stationary phase. A non-microbial ΣH2S-consuming reaction is interpreted to have occurred during the stationary phase and this had large sulfur isotope fractionations, -10.5 ± 1.1‰ and -45.6 ± 12.4‰. Besides, the non-microbial ΣH2S-consuming reaction decreased Δ33S’ value of the ΣH2S. While the end-product of the non-microbial ΣH2S-consuming reaction in the stationary phase remains unidentified, we observed precipitates of some sulfide minerals and organic sulfur in the stationary phase media. Regardless of the end-product, the reaction increases the sulfur isotopic composition of dissolved ΣH2S, which can account for the high sulfur isotopic compositions of ΣH2S compared to pyrite and organic sulfur observed in some modern marine sediments.

Substrate-dependent strategies to mitigate sulfate inhibition on microbial reductive dechlorination of polychlorinated biphenyls

Sulfate widely co-exists with polychlorinated biphenyls (PCBs) at various concentrations in the subsurface environment. Previous studies have suggested that sulfate often hampers microbial degradation of aliphatic chlorinated solvents such as chloroethenes. However, the impact of sulfate on microbial reductive dechlorination of aromatic PCBs and the underlying mechanisms have received limited attention. Likewise, strategies to mitigate such inhibition remain scarce. Here we found that the mechanisms and mitigation strategies of sulfate inhibition on PCB dechlorination were substrate-dependent. Under electron donor-limiting conditions, even a low concentration of sulfate (2 mM) resulted in a decreased PCB dechlorination rate by 88.7% in a co-culture comprising Dehalococcoides mccartyi CG1 and the sulfate-reducing bacterium Desulfovibrio desulfuricans F1, an inhibition which was attributed to the competition for electron donor between sulfate reduction and PCB dechlorination. As expected, re-amendment of 5 mM lactate effectively re-initiated PCB dechlorination. However, in the presence of a higher concentration of sulfate (5 mM), the PCB dechlorination rate in the co-culture was 77.7% lower than in the control, even with excessive electron donor supply. This inhibition was linked to high concentration of sulfide (∼5 mM) produced from sulfate reduction, as suggested by high availability of electron donor, recovery of dechlorination activity after removal of sulfide, and negligible influence of sulfate on PCB dechlorination in the axenic culture of D. mccartyi CG1. Indeed, sulfide (>5 mM) was found to directly suppress expression of PCB-dechlorinating reductive dehalogenase gene. The highest transcriptional level of pcbA1 was 2.9 ± 0.3 transcripts·cell−1 in the presence of ∼5 mM sulfide, which was increased to 37.4 ± 5.0 transcripts·cell−1 when sulfide was removed. Under this scenario, introduction of ferrous salts (5 mM) efficiently alleviated sulfide inhibition on PCB dechlorination. Interestingly, the augmentation of methanogens in the co-culture was also effective in mitigating sulfide inhibition on PCB dechlorination, offering a new approach to protect Dehalococcoides under sulfide stress. Collectively, these findings deepen our understanding of the influence of sulfate on microbial reductive dechlorination of PCBs and contribute to developing appropriate strategies based on geochemical conditions to alleviate sulfate inhibition during bioremediation of PCB-contaminated sites.

Biomineralization of uranium by Desulfovibrio desulfuricans A3-21ZLL under various hydrochemical conditions

Uranium pollution in groundwater environment has become an important issue of global concern. In this study, a strain of Desulfovibrio desulfuricans was isolated from the tailings of acid heap leaching, and was shown to be able to remove uranium from water via biosorption, bio-reduction, passive biomineralization under uranium stress, and active metabolically dependent bioaccumulation. This research explored the effects of nutrients, pH, initial uranium and sulfate concentration on the functional groups, uranium valence, and crystal size and morphology of uranium immobilization products. Results showed that tetravalent and hexavalent phosphorus-containing uranium minerals was both formed. In sulfate-containing water where Desulfovibrio desulfuricans A3-21ZLL can grow, the sequestration of uranium by bio-reduction was significantly enhanced compared to that with no sulfate loading or no growth. Ungrown Desulfovibrio desulfuricans A3-21ZLL or dead ones released inorganic phosphate group in response to the stress of uranium, which associated with soluble uranyl ion to form insoluble uranium-containing precipitates. This study revealed the influence of hydrochemical conditions on the mineralogy characteristics and spatial distribution of microbial uranium immobilization products. This study is conducive to the long-term and stable bioremediation of groundwater in decommissioned uranium mining area.

Study on Corrosion Characteristics of Aluminum Alloy Al3102 in Sulfate-reducing Bacteria Environment and Investigating the Use of Azadirachta indica Leaves Extract in its Control

An effort to understand the corrosion characteristics of aluminium Al3102 alloy in a neutral medium in the presence of Desulfovibrio desulfuricans was made. The corrosion rate increased up to tenfold in the bacterial medium in comparison to the control (abiotic) medium. Scanning electron microscopy (SEM) studies showed substantial sulfate-reducing bacteria (SRB) adhesion on the alloy surface and pit formation. Supplementation of 1000 ppm Azadirachta indica leaves extract decreased corrosion by 82%. Sulfide analysis, SEM, and X-ray photoelectron spectroscopy (XPS) studies showed a significant effect of neem leaf extract (NLE) on bacterial metabolic activity and confirmed the adsorption of the inhibitor molecules on Al3102 surface. Electrochemical impedance spectroscopy studies showed that the NLE formed a highly resistive external layer which protected the alloy surface from the corrosive effects. The gas chromatography-mass spectroscopy studies (GC-MS) showed appreciable amount of esters, terpenoids, heterocyclic nitrogen, sulfur compounds, and organic bromine compounds in NLE.

Rubredoxin Protein Scaffolds Sourced from Diverse Environmental Niches as an Artificial Hydrogenase Platform.

Nickel-substituted rubredoxin (NiRd) from Desulfovibrio desulfuricans has previously been shown to act as both a structural and functional mimic of the [NiFe] hydrogenase. However, improvements both in turnover frequency and overpotential are needed to rival the native [NiFe] hydrogenase enzymes. Characterization of a library of NiRd mutants with variations in the secondary coordination sphere suggested that protein dynamics played a substantial role in modulating activity. In this work, rubredoxin scaffolds were selected from diverse organisms to study the effects of distal sequence variation on catalytic activity. It was found that though electrochemical catalytic activity was only slightly impacted across the series, the Rd sequence from a psychrophilic organism exhibited substantially higher levels of solution-phase hydrogen production. Additionally, Eyring analyses suggest that catalytic activation properties relate to the growth temperature of the parent organism, implying that the general correlation between the parent organism environment and catalytic activity often seen in naturally occurring enzymes may also be observed in artificial enzymes. Selecting protein scaffolds from hosts that inhabit diverse environments, particularly low-temperature environments, represents an alternative approach for engineering artificial metalloenzymes.

Community ecological study on the reduction of soil antimony bioavailability by SRB-based remediation technologies

Sulfate-reducing bacteria (SRB) were effective in stabilizing Sb. However, the influence of electron donors and acceptors during SRB remediation, as well as the ecological principles involved, remained unclear. In this study, Desulfovibrio desulfuricans ATCC 7757 was utilized to stabilize soil Sb within microcosm. Humic acid (HA) or sodium sulfate (Na2SO4) were employed to enhance SRB capacity. The SRB+HA treatment exhibited the highest Sb stabilization rate, achieving 58.40%. Bacterial community analysis revealed that SRB altered soil bacterial diversity, community composition, and assembly processes, with homogeneous selection as the predominant assembly processes. When HA and Na2SO4 significantly modified the stimulated microbial community succession trajectories, shaped the taxonomic composition and interactions of the bacterial community, they showed converse effect in shaping bacterial community which were both helpful for promoting dissimilatory sulfate reduction. Na2SO4 facilitated SRB-mediated anaerobic reduction and promoted interactions between SRB and bacteria involved in nitrogen and sulfur cycling. The HA stimulated electron generation and storage, and enhanced the interactions between SRB and bacteria possessing heavy metal tolerance or carbohydrate degradation capabilities.

Mediated biosynthesis of CdS QDs by EPS from Desulfovibrio desulfuricans sub sp. under carbon source-induced reinforcement

This paper describes a unique molecular mechanism for the EPS-mediated synthesis of CdS QDs by sulfate-reducing bacteria (SRB) under carbon source-induced reinforcement. Under the induced by carbon sources (HCOONa, CH3COONa and C6H12O6), there was a significant increase in EPS production of SRB, particularly in protein, and the capacity of Cd(II) adsorption was further enhanced. CdS QDs were extracellularly synthesized by adding S2- after Cd(II) adsorption. The results showed that CdS QDs were wrapped or adhered by EPS, and the most significant increase in Arg and Lys among basic amino acids in EPS after HCOONa-induced was 133.34% and 63.89%, respectively. This may serve as a biological template for QD synthesis, producing protein gels with a large number of microcavities and controlling the nucleation of CdS QDs. The highest yield of HCOONa-CdS was achieved after induction, with 23.59 g/g biomass per unit strain, which was 447.34% higher than that before induction and was at a high level in previous studies. The synthesized CdS QDs were uniform in size distribution and had higher luminescence activity and a larger specific surface area than those synthesized by the chemical synthesis route, provides a new idea for EPS treatment of heavy metal wastewater and metal biorecovery.