Thiocyanate (SCN-) is a toxic and refractory inorganic pollutant commonly found in industrial wastewater. This paper proposes an innovative solution to enhance the activation of peroxydisulfate (PDS) by designing a highly graphitized hollow carbon nanosphere structure catalyst doped with copper nanoparticles, thereby achieving efficient and complete degradation of SCN-. Specifically, the active sites and electron transfer ability of the catalyst were improved by controlling the pyrolysis temperature and acid etching time during the catalyst preparation process, thereby optimizing the PDS activation rate and SCN- degradation rate. In the optimized Cu-NPs@C/PDS system, a low dose of Cu-NPs@C-650–6 catalyst (0.2 g/L) and PDS ([PDS]0: [SCN-]0 = 3: 1) was sufficient to achieve 100 % degradation of 100 mg/L SCN- within 20 min. The non-radical oxidation pathway combined with singlet oxygen (1O2) and direct electron transfer process was identified as the main degradation mechanism of SCN-. The unique oxidation mechanism provided a higher SCN- degradation reaction rate constant (k1 = 0.39 min−1) and stronger environmental ion resistance. Density functional theory (DFT) calculations show that the CO bond is the primary PDS active site for the formation of inside-out electron delocalization, and the S atom in SCN- is a vulnerable site. This work offers technological support for the treatment of water bodies holding emerging electron-rich pollutants in addition to fresh insights into the creation of efficient catalysts for metal-carbon composites.