Changes in temperature and pressure patterns in gas- and hydrate-saturated permafrost caused by natural geodynamic processes or human impacts can lead to the active flow of gas through unfrozen zones, and its explosive emission is often accompanied by crater formation. Gas flow and accumulation in the shallow permafrost can be explained by the conditions of gas pressure equal to or exceeding the overburden pressure and high-pressure gradients. For the first time, filtration tests were conducted on ice- and hydrate-saturated rocks under uniaxial compression at various negative temperatures using a developed methodology. The modeling of gas flow in a mixture of ice-saturated sand and 25 % montmorillonite at gas pressure gradients within 2 MPa, shows that gas flow can start at warm negative temperatures near the thaw point. Pore hydrate formation in frozen sand heated to positive temperatures and frozen back led to a linear decrease in gas permeability by up to eight times. However, the behavior of gas permeability during hydrate dissociation is nonlinear as it increased within a few hours after the onset of dissociation, but then decreased exponentially in the following 24 h.