To explore the difference in the response of the radial growth of Pinus tabulaeformis and Picea crassifolia on different timescales to climate factors in the eastern part of Qilian Mountains, we used dendrochronology to select four different timescales (day, pentad (5 days), dekad (10 days), and month) for exploration. The primary conclusions were as follows: (1) According to an investigation of the dynamic correlations between radial growth and climate conditions, drought during the growing season has been the dominant limiting factor for radial growth across both species in recent decades; (2) climate data at the dekad scale are best for examining the correlations between radial growth and climate variables; and (3) based on basal area increment, P. tabuliformis in the study area showed a trend of first an increase and then a decrease, while P. crassifolia showed a trend of continuous increase (BAI). As the climate continues to warm in the future, forest ecosystems in arid and semi-arid areas will be more susceptible to severe drought, which will lead to a decline in tree growth, death, and community deterioration. As a result, it is critical to implement appropriate management approaches for various species based on the peculiarities of their climate change responses.