Machine learning (ML) algorithms are increasingly applied to structure health monitoring (SHM) problems. However, their application to pile damage detection (PDD) is hindered by the complexity of the problem. A novel multi-sensor pile damage detection (MSPDD) method is proposed in this paper to extend the application of ML algorithms in the automatic identification of PDD. The time-series signals collected by multiple sensors during the pile integrity test are first processed by the traveling wave decomposition (TWD) theory and are then input into a hybrid one-dimensional (1D) convolutional and recurrent neural network. The hybrid neural network can achieve the automatic multi-task identification of pile damage detection based on the time series of MSPDD results. Finally, the analytical solution-based sample set is utilized to evaluate the performance of the proposed hybrid model. The outputs of the multi-task learning framework can provide a detailed description of the actual pile quality and provide strong support for the classification of pile quality as well.