The dinoflagellate cyst record from an Upper Cretaceous (uppermost Cenomanian–upper Coniacian) Chalk core, drilled at Banterwick Barn, Berkshire, is described and statistically correlated with elemental and stable isotope bulk sediment geochemical data from the same core. Seventy-two dinocyst species and subspecies are recorded, and stable carbon and oxygen isotopic (δ 13C, δ 18O) trends are documented. Lithostratigraphy and chemostratigraphic correlation of the δ 13C curve with an expanded section at Dover, Kent, are used to identify stratigraphically significant marls, and determine the positions of macrofossil zones and stage boundaries in the Banterwick Barn core. These data indicate that >30 m of chalk at Dover are represented by <2 m of Chalk Rock at Banterwick Barn, with much of the succession being absent due to erosion and non-deposition. First and last appearance datums (FAD, LAD), first and last common occurrences, and acmes of key Turonian–Coniacian dinocyst species are documented and compared with other records from the Anglo–Paris Basin. A new subspecies, Senoniasphaera rotundata alveolata is proposed, which has a FAD in the lower Turonian and last appears (LAD) in the lower Coniacian. Senoniasphaera rotundata rotundata [autonym, herein] has its FAD in the middle Turonian, first common occurrence in the uppermost Turonian, and LAD in the upper Coniacian. An extremely impoverished assemblage of dinocysts in the highest Cenomanian to lowest Turonian is considered to be largely a preservational artefact of intraclastic nodular and calcarenitic chalks, and is not related directly to the well-documented global oceanic anoxic event (OAE2) occurring at that time (∼93.5 Ma). A sharp increase in dinocyst abundance in the lower Turonian corresponds with a change in lithology to more marly chalks. A gradual decrease in the number of species is observed through the middle Turonian to upper Coniacian; δ 18O records show that this was associated with global climatic cooling. Cluster analysis of the dinocyst abundance record with geochemical data indicates four distinct species groups with characteristic geochemical associations, i.e. Groups 1–4. Groups 1 and 2 are associated with phases of increased siliciclastic supply; a positive correlation with higher δ 13C values differentiates the latter. Group 3 is independent of carbonate and detrital input, and Group 4 is associated with high carbonate flux and low detrital supply. These groupings suggest that cyst-forming dinoflagellates exhibited a range of ecological niches in the Late Cretaceous. Although the relationship between the encystment process and the geochemical associations is unclear, key environmental factors are likely to be sea-level and climate related, including water depth, turbidity, nutrient supply, sea-surface temperature, and environmental stability/predictability. Integrated geochemical and palynological studies have great potential for inter-regional correlation and palaeoenvironmental interpretation.