Nutrient Cycling Research Articles

Nitrogen enrichment stimulates nutrient cycling genes of rhizosphere soil bacteria in the Phoebe bournei young plantations

Anthropogenic nitrogen (N) deposition is expected to increase substantially and continuously in terrestrial ecosystems, endangering the balance of N and phosphorus (P) in P-deficient subtropical forest soil. Despite the widely reported responses of the microbial community to simulated N deposition, there is limited understanding of how N deposition affects the rhizosphere soil processes by mediating functional genes and community compositions of soil bacteria. Here, five levels of simulated N deposition treatments (N0, 0 g m−2·yr−1; N1, 100 g m−2·yr−1; N2, 200 g m−2·yr−1; N3, 300 g m−2·yr−1; and N4, 400 g m−2·yr−1) were performed in a 10-year-old Phoebe bournei plantation. Quantitative microbial element cycling smart chip technology and 16S rRNA gene sequencing were employed to analyze functional gene compositions involved in carbon (C), N, and P cycling, as well as rhizosphere bacterial community composition. N deposition significantly influenced C cycling relative abundance of genes in the rhizosphere soil, especially those involved in C degradation. Low and moderate levels (100–300 g m−2·yr−1) of N deposition promoted the relative abundance of the C decomposition-related genes (e.g., amyA, abfA, pgu, chiA, cex, cdh, and glx), whereas high N deposition (400 g m−2·yr−1) suppressed enzyme (e.g., soil invertase, soil urease, and soil acid phosphatase) activities, affecting the C cycling processes in the rhizosphere. Simulated N deposition affected the functional genes associated with C, N, and P cycling by mediating soil pH and macronutrients. These findings provide new insights into the management of soil C sequestration in P. bournei young plantations as well as the regulation of C, N, and P cycling and microbial functions within ecosystems.

GPS-Based Hidden Markov Models to Document Pastoral Mobility in the Sahel.

In agrarian systems where animal mobility is crucial for feed management, nutrient cycles and household economy, there is a notable lack of precise data on livestock mobility and herding practices. We introduce a methodology leveraging GPS-based behavioural models to analyse and document pastoral mobility in the Sahel. Over 2.5 years, we conducted a continuous collection of GPS data from transhumant and resident cattle herds in the Senegalese agropastoral semiarid rangelands. We developed a Hidden Markov Model robustly fitted to these data to classify recordings into three states of activity: resting (47% overall), foraging (37%) and travelling (16%). We detail our process for selecting the states and testing data subsets to guide future similar endeavours. The model describes state changes and how temperature affects them. By combining the resulting dataset with satellite-based land-use data, we show the distribution of activities across landscapes and seasons and within a day. We accurately reproduced key aspects of cattle mobility and characterised rarely documented features of Sahel agropastoral practices, such as transhumance phases, nocturnal grazing and in-field rainy season paddocking. These results suggest that our methodology, which we make available, could be valuable in addressing issues related to the future of Sahelian pastoralism.

Heat stress and bleaching in corals: a bioenergetic model

AbstractThe coral-dinoflagellate endosymbiosis is based on nutrient exchanges that impact holobiont energetics. Of particular concern is the breakdown or dysbiosis of this partnership that is seen in response to elevated temperatures, where loss of symbionts through coral bleaching can lead to starvation and mortality. Here we extend a dynamic bioenergetic model of coral symbioses to explore the mechanisms by which temperature impacts various processes in the symbiosis and to enable simulational analysis of thermal bleaching. Our model tests the effects of two distinct mechanisms for how increased temperature impacts the symbiosis: 1) accelerated metabolic rates due to thermodynamics and 2) damage to the photosynthetic machinery of the symbiont caused by heat stress. Model simulations show that the model can capture key biological responses to different levels of increased temperatures. Moderately increased temperatures increase metabolic rates and slightly decrease photosynthesis. The slightly decreased photosynthesis rates cause the host to receive less carbon and share more nitrogen with the symbiont. This results in temporarily increased symbiont growth and a higher symbiont/host ratio. In contrast, higher temperatures cause a breakdown of the symbiosis due to escalating feedback that involves further reduction in photosynthesis and insufficient energy supply for $$\hbox {CO}_2$$ CO 2 concentration by the host. This leads to the accumulation of excess light energy and the generation of reactive oxygen species, eventually triggering symbiont expulsion and coral bleaching. Importantly, bleaching does not result from accelerated metabolic rates alone; it only occurs as a result of the photodamage mechanism due to its effect on nutrient cycling. Both higher light intensities and higher levels of DIN render corals more susceptible to heat stress. Conversely, heterotrophic feeding can increase the maximal temperature that can be tolerated by the coral. Collectively these results show that a bioenergetics model can capture many observed patterns of heat stress in corals, such as higher metabolic rates and higher symbiont/host ratios at moderately increased temperatures and symbiont expulsion at strongly increased temperatures.

Techno-economic analysis of nutrient recovery from urine: Centralized treatment of hydrolyzed urine vs. decentralized treatment of fresh urine

The centralized process integrating “Thermal NH3 stripping → Na-chabazite adsorption → Struvite precipitation” has been proposed for nutrient recovery from hydrolyzed urine. Meanwhile, a decentralized approach involving Na-chabazite and biochar adsorption has been suggested for fresh urine, followed by urea hydrolysis and the subsequent centralized integration of struvite precipitation and thermal stripping. However, a systematic comparison of nutrient recovery processes for fresh and hydrolyzed urine, evaluating both technical viability and financial feasibility, is lacking. This study addresses the gap by thoroughly examining both scenarios over a 30-year project, using Université Laval as a case study. It provides a comprehensive roadmap for techno-economic assessment, offering guidance for evaluating nutrient recovery processes prior to scaling up. The decentralized process achieved higher recovery efficiencies for nitrogen and phosphorus, at 89.4 % and 98.7 %, respectively. Financially, the decentralized scenario demonstrated its advantage in the lower initial investment requirement, thereby generating higher gross profits compared to the centralized scenario. As a result, it is projected to reach the break-even point in the 21st year, demonstrating its potential economic feasibility. Sensitivity analysis indicated that a 20 % increase in urine inflow rate and the price of urea-enriched biochar could further enhance the economic viability of both processes. Beyond financial considerations, both scenarios have the potential to reducing the contaminant loading rate in the downstream wastewater treatment plants and promote nutrient recovery and recycling.

Biofilms in modern CaCO3-supersaturated freshwater environments reveal viral proxies

Biofilms are mucilaginous-organic layers produced by microbial activity including viruses. Growing biofilms form microbial mats which enhance sediment stability by binding particles with extracellular polymeric substances and promoting growth through nutrient cycling and organic matter accumulation. They preferentially develop at the sediment-water interface of both marine and non-marine environments, and upon the growing surfaces of modern tufa and travertine. In this context, however, little is known about the factors, environmental or anthropogenic, which affect viral communities in freshwater spring settings. To explore this issue, geochemical and metagenomic data were subjected to multidimensional analyses (Principal Component Analysis, Classical Multidimensional Scaling, Partial Least Squares analysis and cluster analysis based on beta-diversity), and these show that viral composition is specific and dependent on environment. Indeed, waters precipitating tufa and travertine do vary in their geochemistry with their viruses showing distinct variability between sites. These differences between virus groups allow the formulation of a viral proxy, based on the Caudoviricetes/Megaviricetes ratio established on the most abundant groups of viruses. This ratio may be potentially used in analysing ancient DNA preserved in carbonate formations as an additional source of information on the microbiological community during sedimentation.

The Role of Organic Amendments and Their Impact on Soil Restoration: A Review

Soil organic matter (SOM) plays a pivotal role in maintaining soil health by enhancing its physical, chemical, and biological properties. It improves soil structure, water retention, nutrient availability, and microbial activity, contributing significantly to sustainable agriculture. Organic amendments, including animal manure, compost, biosolids, crop residues, and various organic by-products, are widely used to restore degraded soils by increasing SOM content. These amendments not only supply essential nutrients but also promote biological aggregation, suppress soil-borne pathogens, and improve soil's resistance to environmental stressors such as drought and heavy metal toxicity. The positive impacts of organic amendments on soil properties are well-documented, with key benefits including increased soil organic carbon (SOC), improved nutrient cycling, enhanced microbial diversity, and greater water-holding capacity. Organic materials such as compost and animal manure have been shown to significantly improve soil fertility and restore degraded soils. The application of green manure and crop residues also boosts soil biodiversity, enhances rhizospheric processes, and supports overall ecosystem resilience. This paper emphasizes the importance of adopting holistic soil management practices that include organic amendments, conservation tillage, and sustainable cropping systems to address soil degradation. By focusing on replenishing SOM, improving nutrient availability, and increasing soil biodiversity, these practices can contribute to the long-term sustainability of agricultural systems and environmental health. The restoration of soil organic matter is essential for enhancing soil quality and mitigating degradation, ultimately ensuring food security and ecosystem stability for future generations.

Advancing carbon sequestration and nutrient management in the South African dairy industry for sustainable growth

The dairy industry in South Africa is currently grappling with significant challenges, including escalating costs and diminishing profit margins. However, these difficulties also create a pivotal opportunity for the sector to embrace sustainable practices that not only enhance environmental stewardship but also encourage economic resilience. A crucial step in this transition is to dispel prevalent misconceptions about the industry’s environmental footprint and to highlight its positive contributions to sustainable agricultural practices. Farmers are encouraged to adopt innovative strategies that enhance soil health and reduce their ecological impact. This review focuses on essential factors influencing nutrient management and the processes that contribute to soil carbon enhancement. Effective management is crucial for the sustainability of pasture-based dairy systems, as herbage biomass significantly influences nutrient cycling and soil organic matter accumulation. For instance, well-managed pastures with high biomass can efficiently recycle nutrients from manure, enhancing plant growth. This process contributes to soil organic carbon buildup, which aids in carbon sequestration. In contrast, poor nutrient management can lead to nutrient imbalances and lower herbage production, reducing carbon storage potential. Moreover, the movement of nutrients below the surface is a critical pathway for enhancing soil health and promoting ecological balance. By implementing sustainable practices and refining nutrient stewardship strategies, pasture-based dairy farmers can significantly advance their sustainability goals. This includes recognizing the broader implications of soil health on farm productivity and environmental resilience, as well as the potential for improved biodiversity.

Distribution of protoporphyrin IX during Prorocentrum donghaiense blooms and its relationship with particle-attached and free-living bacterial communities

Particle-attached (PA) and free-living (FL) bacterial communities are essential for nutrient cycles and metabolite production and serve as a food source in aquatic systems. However, our understanding of how biotic factors influence community interactions, co-occurrence patterns, and niche occupancy remains limited. This study investigated the influence of protoporphyrin IX (PPIX) on bacteria with different lifestyles during Prorocentrum donghaiense bloom. The findings revealed that PPIX distribution responded variably to changes in physicochemical parameters induced by red tide bloom. Large-sized or particle-attached (PA) phytoplankton (cell size >3 μm) were identified as the primary contributors to environmental PPIX, while small-sized plankton or free-living (FL) microorganisms (<3 μm) contributed less. In red tide-affected areas, PPIX and its derivatives were significantly more abundant than in non-red tide areas, indicating an increased demand for porphyrins by plankton during red tides. Additionally, the red tide also significantly influenced the preference of bacterial lineages for PA or FL lifestyles, highlighting a close interaction between bacteria with different lifestyles and PPIX levels. This study quantitatively analyzed the distribution of PPIX across different cell sizes in red tide and non-red tide marine environments, providing insights into microbial interactions and dynamics in changing ecosystems and offering a reference for using PPIX to predict red tide ecological disasters.

Thinning Impacts on Carbon and Water Budgets in a Temperate Deciduous Forest Ecosystem

Among various forest management activities, thinning is a prevalent treatment that affects tree growth and living biomass. Increased moisture and light availability may also enhance the mineralization of litter and dead wood organic matter, impacting soil carbon stocks. Thinning may also affect the services forests provide, including water production and nutrient cycling. The impacts of thinning on water yield and carbon stocks have been well documented around the globe while targeting mainly one of these ecosystem services. Our experimental paired catchment study covers both and puts forward long term results. We assessed the carbon stock changes caused by two slight thinning treatments together with the impacts on water yield in experimental paired catchments of 71.9 (W–I) and 77.5 hectares (W–IV) in Istanbul, Türkiye. The null hypothesis was that the slight thinnings did not affect the water yield and carbon stocks significantly. On the carbon stock part, we calibrated and parametrized the CBM–CF3 model with field measurements to simulate changes in carbon stocks of mixed deciduous forest stands. The intensities of the treatments (thinnings) were 11% and 18% of the basal area, performed in 1986 and 2011, respectively. We found that, while C stocks decreased by around 30 tons per hectare during the 1986–2020 period, the water yield was enhanced by approximately 25 mm/yr in the treatment catchment compared to the control watershed during the four-year post-treatment period. This amount of streamflow increase was around 10 percent of the average water yield of the catchments. It was concluded that there was a detectable increase in water yield during the following four years of the slight thinning treatments, while the reduction in abovegound carbon stocks continued for more than three decades.

Effects of plastic film mulching on soil microbial carbon metabolic activity and functional diversity at different maize growth stages in cool, semi-arid regions.

Plastic film mulching has been widely used to enhance soil hydrothermal conditions and increase crop yields in cool, semi-arid areas. However, its impact on soil microbial carbon metabolic activity and functional diversity during plant growth remains unclear despite their important roles in nutrient cycling and soil quality evaluation. This study used the Biolog EcoPlate technique to investigate the dynamics and driving factors of soil microbial carbon metabolic activity and functional diversity at different maize growth stages following plastic film mulching. The results revealed that film mulching significantly increased microbial carbon metabolic activities [represented by average well color development (AWCD)] by 300% at the seedling stage and by 26.8% at maturity but decreased it by 47.4% at the flowering stage compared to the control (without mulching). A similar trend was observed for the microbial functional diversity index. Redundancy analysis identified soil moisture (SM), soil temperature (ST), dissolved organic carbon (DOC), microbial biomass carbon (MBC), and bacteria amounts as the primary factors influencing changes in soil microbial carbon source utilization. The mulch treatment significantly increased SM at all growth stages, while its warming effect disappeared at the flowering stage. Soil DOC, MBC, and bacterial populations were notably higher under mulching at the seedling and maturity stages but lower at the flowering stage. Pearson correlation analysis showed that changes in SM, ST, DOC, MBC, and bacterial populations positively correlated with the utilization of all carbon source classes, AWCD, and functional diversity indexes after film mulching. Furthermore, maize grain yield and water use efficiency increased by 142 and 129%, respectively, following film mulching. In conclusion, plastic film mulching enhanced soil microbial carbon metabolic activity and functional diversity at the seedling and maturity stages, improving crop yields in cool, semi-arid areas. Furthermore, the decrease in soil carbon metabolic capacity at flowering stage highlights that supplementing soil carbon sources should be considered after continuous film mulching to sustain or enhance farmland productivity and soil quality.

Microbiome and Resistome Studies of the Lithuanian Baltic Sea Coast and the Curonian Lagoon Waters and Sediments

Background: the widespread use of antibiotics in human and veterinary medicine has contributed to the global challenge of antimicrobial resistance, posing significant environmental and public health risks. Objectives: this study aimed to examine the microbiome and resistome dynamics across a salinity gradient, analyzing water and sediment samples from the Baltic Sea coast and the Curonian Lagoon between 2017 and 2023. Methods: the composition of the water and sediment bacterial community was determined by Full-Length Amplicon Metagenomics Sequencing, while ARG detection and quantification were performed using the SmartChipTM Real-Time PCR system. Results: the observed differences in bacterial community composition between the Baltic Sea coast and the Curonian Lagoon were driven by variations in salinity and chlorophyll a (chl a) concentration. The genera associated with infectious potential were observed in higher abundances in sediment than in water samples. Over 300 genes encoding antibiotic resistance (ARGs), such as aminoglycosides, beta-lactams, and multidrug resistance genes, were identified. Of particular interest were those ARGs that have previously been detected in pathogens and those currently classified as a potential future threat. Furthermore, our findings reveal a higher abundance and a distinct profile of ARGs in sediment samples from the lagoon compared to water. Conclusions: these results suggest that transitional waters such as lagoons may serve as reservoirs for ARGs, and might be influenced by anthropogenic pressures and natural processes such as salinity fluctuation and nutrient cycling.

Macrophyte Diversity and Ecosystem Services in Wetlands of Eastern Ranchi: A Multi-site Analysis of Abundance, Frequency, and Importance Value Index Patterns

Macrophytes, visible aquatic and semi-aquatic plants, are integral components of wetland ecosystems, playing crucial roles in maintaining biodiversity, providing ecosystem services, and ensuring ecological stability. This research examines the distribution, abundance, frequency, diversity, and ecosystem services of macrophytes in several wetlands (W1-W7) located in the eastern part of Ranchi district, Jharkhand, India. The study sites include Bundu Lake, Hindalco Pond, Choga Bada Talab, Raja Bandh, Kita Uparbandh, Tamar Bada Talab, and Rukka Dam. A quantitative assessment using quadrat sampling and phytosociological methods was conducted from September 2022 to March 2023 to ensure accurate data collection and analysis. The study documented 78 macrophyte species belonging to 33 families and 58 genera. Emergent macrophytes were found to be the dominant life form, constituting 69% of the recorded species. Several species demonstrated high frequency and abundance across multiple study sites, including Pontederia crassipes Mart., Alternanthera philoxeroides (Mart) Griseb., Hydrilla verticillata (L.f.) Royle, Ipomoea aquaticaForssk., and Nymphoides hydrophyllum (Lour.) kuntze. To assess the diversity and ecological characteristics of the macrophyte communities, various diversity indices were calculated. These included the Shannon-Wiener index, Simpson's index, Margalef index, and Pielou's Evenness index. The results of these analyses revealed high levels of macrophyte diversity and evenness within the studied wetlands. Twenty-one macrophytes were identified as key species and nine species as rare species based on their IVI (Importance Value Index) scores. The key species were found to provide essential ecosystem services, including erosion control, water quality improvement, nutrient cycling, carbon sequestration, and habitat provision for other organisms. This research contributes significantly to our understanding of macrophyte diversity patterns and traits-based ecosystem services in wetland ecosystems. The findings of this study have important implications for the development and implementation of effective conservation strategies for these vital wetland ecosystems in the eastern Ranchi (W1- W7).

Phosphate pre-concentration from wastewater by a continuous flow bench-scale forward osmosis membrane: A circular economy approach on nutrient recovery

Phosphate is a vital element necessary for the growth and development of plants, making it a crucial element in agricultural fertilizers. Extracting phosphate from wastewater for recovery aligns with the principles of a circular economy by closing the loop on nutrient cycles. Instead of viewing wastewater as a waste product, treating it as a resource for recovering valuable nutrients like phosphate promotes a more sustainable and efficient use of resources. In this study, the phosphate from synthetic wastewater was pre-concentrated by a continuous flow forward osmosis membrane system to facilitate effective precipitation. The pre-concentration feasibility of forward osmosis was studied by changing the draw concentration, feed concentration, feed pH, and flow rate of the feed solution. With the optimum operational parameters in batch mode such as pH of 7, the draw solute concentration of 0.4 M MgSO4, the feed and draw flowrate of 0.7 L/min and 0.3 L/min, the phosphate concentration was increased from 30 mg/L to 525 mg/L after 60 min, the average osmotic flux and reverse solute flux was 2.7 L/m2/h and 0.43 g/m2/h, respectively. As operated with continuous mode, the final phosphate concentration was increased four times, the average osmotic flux was higher with 8.1 L/m2/h and the reverse solute flux was 0.86 g/m2/h, which could improve the efficiency of calcium phosphate crystallization in precipitation/ crystallization reactors. This integrated system, which includes forward osmosis as a pretreatment method followed by a precipitation process, is technically possible for application on a larger scale as a circular economy approach.

Satellite remote sensing reveals the footprint of biodiversity on multiple ecosystem functions across the NEON eddy covariance network

Abstract Biodiversity relates to ecosystem functioning by modulating biogeochemical cycles of carbon, water, energy, and nutrients within and between multiple biotic and abiotic components of the ecosystems. However, large-scale, systematic measurements of plant biodiversity are still lacking, and the effects of biodiversity on measured biogeochemical processes are understudied. Here, we combined alpha (α) and beta (β) taxonomic measurements, spectral diversity from satellite observations, structural properties of the vegetation, and climatic drivers to assess the effect of biodiversity on ecosystem functional properties. Ecosystem functional properties were computed from eddy-covariance fluxes at 44 sites of the National Ecological Observatory Network. Based on the spectral variation hypothesis, we used the near-infrared reflectance of vegetation (NIRv) derived from Sentinel-2 satellite imagery to compute Rao’s quadratic entropy (Rao Q), a distance metric related to spatial heterogeneity. Using an automatic model averaging technique, we found that biodiversity proxies hold substantial explanatory power when predicting several ecosystem functions related to carbon and water exchange. In particular, NIRv-based Rao Q (RaoQNIRv) reflected positive biodiversity effects on productivity, as expected from the literature. In contrast, traditional taxonomic α-diversity indices were generally not selected as relevant predictors of the ecosystem functional properties. Yet, β-diversity strongly contributed to the prediction of carbon use efficiency, surface conductance, and water use efficiency. We also found that the RaoQNIRv is less affected by issues of saturation and bare soil contribution compared to RaoQNDVI. We show that spectral heterogeneity based on remotely sensed NIRv holds the potential for globally characterizing the biodiversity-ecosystem functioning relationship (BEF). While systematic measurements of taxonomic diversity co-located at biogeochemical measurement stations could reduce the uncertainty surrounding the BEF relationship at whole-ecosystem scale, remotely- sensed metrics characterizing important functional and structural diversity aspects of the landscape will be crucial for continuous spatiotemporal monitoring of biodiversity with relevant implications for ecosystem services to humankind.

The effects of Mid-Holocene foragers on the European oyster in Denmark

Oysters (Ostreidae) play a pivotal role in the health and productivity of marine ecosystems. Their unique ability to filter water, provide habitat, and contribute to nutrient cycling has remained underused in many parts of Europe following the destruction of vast oyster beds in the 19th and 20th centuries. The burgeoning field of oyster restoration for aquaculture has recognized the potential of these bivalves in promoting ecosystem resilience and enhancing biodiversity. Restoring oysters to previous levels requires the establishment of ecological baselines that ideally take into account the long-term changes of animal behavior as well as the surrounding environment prior to significant human intervention, an extremely challenging task. Archaeological shell middens are invaluable baseline archives and provide exclusive insights into past ecosystems. Here, we use demographic information from over 2,000 analyzed European oyster (Ostrea edulis) shells dating from ~5,660 to 2,600 cal BCE (calibrated years BCE), the largest archaeological growth rate dataset of mollusks yet. Through the analysis of size as well as ontogenetic age, we decouple anthropogenic from environmental impacts throughout Denmark. Our data show definitive influence of oyster size-age structure through human harvesting during the Mid-Holocene, with older oysters in the Mesolithic (mean: 4.9 y) than the Neolithic (mean: 3.7 y), irrespective of changes in growth rate. Furthermore, we present the metrics for long-term sustainable harvesting of oysters across environmental and socioeconomic transitions, providing demographic targets for current oyster restoration projects and valuable context in mitigating the impact of modern climatic change.

Linking fish bioturbation to life history in a eutrophic wetland: An analysis of fish contributions to internal nutrient loading

Abstract Bioturbation (sediment disturbance by animal actions) effects on nutrient cycling and nutrient levels in surface waters are difficult to quantify, in part because the diversity and magnitude of species‐specific influences are poorly understood. These influences may have consequences for the management of the trophic state of freshwater ecosystems. Fish cause bioturbation in freshwater and marine ecosystems by digging in benthic sediments, manipulating periphyton mats while searching for prey and scraping hard substrates while feeding. We used experimental enclosures (2.25 m2) to quantify bioturbation‐mediated phosphorus (P) and nitrogen (N) regeneration from sediment by three species of fish that differ in interactions with the benthos (largemouth bass, Micropterus salmoides; tilapia, Oreochromis spp.; and sailfin catfish, Pterogoplichthys spp.) in shallow eutrophic wetlands in Southern Florida. Tilapia are omnivores that include detritus in their diet (winnowing or ingesting sediments) and dig nests in soft sediments year round, sailfin catfish actively burrow into substrate and consume detritus (digging and ingesting sediments), and largemouth bass are piscivores that do not routinely interact with the benthos when feeding but may dig nests in soft sediment in spawning season (January–April). We quantified the amount of suspended flocculent organic matter and changes in water column nutrients (total phosphorus [TP] and total nitrogen [TN]) in 2‐week trials for each species and estimated the portion of nutrient increases relative to fishless controls that could be attributed to bioturbation‐mediated internal nutrient loading through suspension of organic matter (as opposed to excretion or other sources of nutrient loading). Water column nutrient concentrations increased with increasing biomass for all species, but the bioturbation contribution differed by species. Largemouth bass increased water column nutrient concentrations (TP: 86% and TN: 5% relative to controls) but did not influence water column suspended particulate matter through bioturbation of sediment. Tilapia increased water column nutrients a modest amount (TP: 8%; TN: 15%), of which a small portion was attributed to bioturbation (c. 18% of TP). Sailfin catfish raised water column nutrients substantially (TP: 105%; TN: 46%) and up to 100% of the increased TP was attributed to bioturbation. Sailfin catfish also suppressed algal growth and TP accumulation on the sides of the enclosures and reduced nutrient concentrations of the flocculent sediments. Our results were consistent with our hypothesis that behaviour and foraging traits affect bioturbation contributions to nutrient loading. The results also demonstrated that species with similar net effects like largemouth bass and sailfin catfish, added nutrients via different mechanisms (i.e. excretion vs. bioturbation). Considering the feeding strategies and interactions with the substrate of common fish species may assist managers in meeting nutrient reduction goals for eutrophic wetlands and managed freshwater systems.

Biochar affects soil properties over 1 m depth in an alkaline soil of north China Plain

Biochar has been shown to enhance soil quality and agricultural yields. Previous studies about biochar's effect on soil properties mainly concentrated on the top 30 cm layer but less on the subsoils. Given the subsoil's active role in climate change mitigation and its significance for nutrient cycling and crop productivity, understanding biochar's effects at depth is crucial. This study explored the responses of soil organic carbon (SOC), total nitrogen, available potassium, available phosphorus, pH, and electrical conductivity to different doses of biochar addition (0, 10, 20, and 30 Mg/ha) over the 1 m depth of alkaline soil. Additionally, the impact of biochar on soil microbial community was assessed in the top 20 cm. Results demonstrated that biochar addition can increase SOC and improve soil properties in deep soil horizons. Specifically, a 30 Mg/ha biochar addition increased SOC by 1.2–10.1 Mg C/ha in the 10–40 cm layer and by 3 Mg C/ha in the 60–80 cm depth over two years. Additionally, biochar addition at this rate increased total nitrogen by 0.2–0.3 g N/kg in the 10–40 cm depth and elevated available potassium across the 1 m profile, with a maximum increment of 313 mg/kg in the surface 10 cm and a minimum of 97 mg/kg in the 40–60 cm depth. While biochar application did not increase available phosphorus, it resulted in a minor decrease in soil pH (<0.7 units) and a slight increase in electrical conductivity. Moreover, biochar addition did not significantly alter the soil microbial community. Our findings underscore the importance of considering subsoils when evaluating biochar's impact on soil properties. We suggest that subsoils should be considered when estimating the potential of cropland management for increasing soil carbon sequestration and improving soil conditions.

Soil microbial community composition by crop type under rotation diversification

BackgroundCrop rotation is an important agricultural practice that often affects the metabolic processes of soil microorganisms through the composition and combination of crops, thereby altering nutrient cycling and supply to the soil. Although the benefits of crop rotation have been extensively discussed, the effects and mechanisms of different crop combinations on the soil microbial community structure in specific environments still need to be analyzed in detail.Materials and methodsIn this study, six crop rotation systems were selected, for which the spring crops were mainly tobacco or gramineous crops: AT (asparagus lettuce and tobacco rotation), BT (broad bean and tobacco rotation), OT (oilseed rape and tobacco rotation), AM (asparagus lettuce and maize rotation), BM (broad bean and maize rotation), and OR (oilseed rape and rice rotation). All crops had been cultivated for > 10 years. Soil samples were collected when the rotation was completed in spring, after which the soil properties, composition, and functions of bacterial and fungal communities were analyzed.ResultsThe results indicate that spring cultivated crops play a more dominant role in the crop rotation systems than do autumn cultivated crops. Crop rotation systems with the same spring crops have similar soil properties and microbial community compositions. pH and AK are the most important factors driving microbial community changes, and bacteria are more sensitive to environmental responses than fungi. Rotation using tobacco systems led to soil acidification and a decrease in microbial diversity, while the number of biomarkers and taxonomic indicator species differed between rotation patterns. Symbiotic network analysis revealed that the network complexity of OT and BM was the highest, and that the network density of tobacco systems was lower than that of gramineous systems.ConclusionsDifferent crop rotation combinations influence both soil microbial communities and soil nutrient conditions. The spring crops in the crop rotation systems had stronger dominating effects, and the soil bacteria were more sensitive than the fungi were to environmental changes. The tobacco rotation system can cause soil acidification and thereby affect soil sustainability, while the complexity of soil microbial networks is lower than that of gramineous systems. These results provide a reference for future sustainable applications of rotation crop systems.

Hydroponic Lettuce Cultivation with Organic Liquid Fertilizer: Examining Bacterial Inhibition and Phosphate Solubilization

This study explores organic hydroponic cultivation as a sustainable alternative to chemical fertilizers amid global supply challenges. With rising costs and the depletion of conventional nitrogen sources, organic liquid fertilizers are gaining attention for their microbial enrichment processes (MEP) that convert organic matter into plant-accessible nutrients. This experiment focuses on lettuce cultivation using two organic liquid fertilizers, Power Fish and POF vol. 2, in controlled environments. The results show that there are significant differences in plant growth parameters such as leaf number, fresh weight, chlorophyll content, and root length across different fertilizer treatments. Key findings include that effective management practices, including pH control and regular nutrient application, are crucial for maintaining microbial activity and optimizing nutrient uptake efficiency. Additionally, Bacillus sp. and Xanthomonas sp. were isolated from these fertilizers and dual-cultured with rot fungi, Pythium sp. and Fusarium sp. This dual cultivation demonstrated inhibitory activity against these pathogens, showcasing the potential of these microorganisms in promoting biofilm-mediated disease resistance in organic hydroponic systems. The study also emphasizes the phosphate solubilization capabilities of isolated bacteria, essential for sustainable nutrient cycling. Overall, organic hydroponic systems present a promising strategy for sustainable agriculture, reducing dependency on chemical inputs while enhancing crop productivity and resilience to environmental stressors.

Influence of soil microplastic contamination on maize (Zea mays) development and microbial dynamics

BackgroundMicroplastics are contaminants in soil ecosystems that alter biophysical processes, affect plant growth, ecosystems and humans in the long run. This study was conducted to investigate the influence of soil microplastic contamination on the growth, development, and microbial dynamics of maize (Zea mays).Composite soil samples were collected from the farm from 0 to 10 cm depth. Physicochemical properties were assessed before maize seed sowing. Three soil weight categories were treated with 30 g, 20 g and 10 g microplastics. Soil physicochemical properties and heavy metal content in maize plants were analyzed. Morphological parameters, microbial counts, and microorganism identification were conducted. FTIR analysis was carried out in selected plant parts.ResultsThe study revealed a pH range of 5.00–6.70, electrical conductivity of 70–158 µS/cm, organic carbon and organic matter, total nitrogen, average phosphorus content, clay and silt content. The concentrations of heavy metals in plant parts were within WHO standard limits of 425.5 and 500 mg/kg for iron and manganese, but above the limits of 40, 60, and 350 mg/kg for copper, zinc and magnesium. The plant had various leaf sizes and heights, with chlorosis and necrotic activity ranging from 0.33 to 2.67, and a range of 1.33 to 6.33, respectively. Soil samples showed a total bacterial count (TBC) of 2.00 × 103 cfu/g to 7.60 × 104 cfu/g and a total fungal count (TFC) of 4.00 × 103 cfu/g to 2.20 × 104 cfu/g. Pseudomonas aeruginosa, Bacillus subtilis, Escherichia coli, Staphylococcus epidermidis, Proteus mirabilis and Bacillus cereus had percentage occurrences of 44.31, 21.17, 9.12, and 3.26%, respectively. Penicillium notatum was the most prevalent, while Fusarium spp. was the least prevalent. The FTIR analysis of maize seeds from soil samples A, B, and C revealed various organic compounds, with opium powder and streptomycin sulphate being the most abundant. The study revealed that pot B had the highest microplastic concentration at 1 WAS, while pot C had the lowest at 0.10 mg/kg, indicating a differential soil microplastic accumulation.ConclusionMicroplastics impact soil health, plant growth, and nutrient cycling, necessitating sustainable agriculture. Long-term research is needed to understand ecological and physiological impacts and explore remediation techniques.