Three-dimensional (3D) scanning technologies could transform medical practices by creating virtual tissue banks. In bone transplantation, new approaches are needed to provide surgeons with accurate tissue measurements while minimizing contamination risks and avoiding repeated freeze-thaw cycles of banked tissues. This study evaluates three prominent non-contact 3D scanning methods—structured light scanning (SLG), laser scanning (LAS), and photogrammetry (PHG)—to support tissue banking operations. We conducted a thorough examination of each technology and the precision of the 3D scanned bones using relevant anatomical specimens under sterile conditions. Cranial caps were scanned as separate inner and outer surfaces, automatically aligned, and merged with post-processing. A colorimetric analysis based on CIEDE2000 was performed, and the results were compared with questionnaires distributed among neurosurgeons. The findings indicate that certain 3D scanning methods were more appropriate for specific bones. Among the technologies, SLG emerged as optimal for tissue banking, offering a superior balance of accuracy, minimal distortion, cost-efficiency, and ease of use. All methods slightly underestimated the volume of the specimens in their virtual models. According to the colorimetric analysis and the questionnaires given to the neurosurgeons, our low-cost PHG system performed better than others in capturing cranial caps, although it exhibited the least dimensional accuracy. In conclusion, this study provides valuable insights for surgeons and tissue bank personnel in selecting the most efficient 3D non-contact scanning technology and optimizing protocols for modernized tissue banking. Future work will advance towards smart healthcare solutions, explore the development of virtual tissue banks.
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