Crystal Structure Analysis Research Articles

Furano‐ and Thieno‐Fused Carbazole‐Containing Azaborines and Their π‐Extension: Synthesis, Structures, and Properties

AbstractA series of carbazole‐containing azaborines, furano‐fused 1–2F and 1–3F and thieno‐fused 1–2T and 1–3T, were efficiently synthesized from a common carbazole boronic acid ester in two steps. The structural effects of the fused ring moieties and the patterns of the ring fusion were clarified. According to X‐ray crystal structure analysis, the furano‐ and thieno‐fused carbazole azaborines had planar structures and generally formed 1D columns. UV–vis analysis revealed that their absorption properties were significantly affected by the fused ring moieties. In contrast, the fluorescence properties were affected by the ring fusion patterns. π‐Extended derivatives of 1–2T and 1–3T, benzothieno‐fused 1–2BT and 1–3BT and phenyl‐substituted 1–2T‐Ph2 and 1–3T‐Ph2 were synthesized, and the effects of π‐extension on physical properties were also investigated. All the π‐extended compounds showed red‐shifts in absorption and fluorescence spectra compared with the pristine 1–2T and 1–3T. The color of solid‐state emission of the synthesized azaborines was tuned from purple to green without electron‐rich or ‐deficient substituents. The structural effects on the electronic structures were also discussed based on theoretical calculations.

Corrolato(oxo)antimony(V) Dimer with Hydrogen-Bond Donor Groups in Secondary Coordination Sphere as a Catalyst for Hydrogen Evolution Reaction.

The focus is on developing alternative molecular catalysts using main-group elements and implementing strategic improvements for sustainable hydrogen production. For this purpose, a FB corrole with a (2-(2-((4-methylphenyl)sulfonamido)ethoxy)phenyl) group inserted into the meso position (C-10) of the corrole, along with its high-valent (corrolato)(oxo)antimony(V) dimer, was synthesized. In the crystal structure analysis of the FB corrole and the (corrolato)(oxo)antimony(V) dimer complex, it was noted that the sulfonamido group in the ligand periphery sits atop the corrole ring. The electrochemical hydrogen evolution reaction (HER) of the (corrolato)(oxo)antimony(V) dimer was studied and compared with a previously reported (corrolato)(oxo)antimony(V) complex, which lacks hydrogen-bond donor groups in the secondary coordination sphere. The newly designed molecules, featuring hydrogen-bond donor groups in the secondary coordination sphere, demonstrated clear superiority in the electrochemical HER. Controlled potential electrolysis was employed to evaluate the charge accumulation associated with hydrogen generation in a homogeneous three-electrode system in the presence of 50 mM TFA. The produced hydrogen exhibits a Faradaic efficiency of approximately 80.96%, a turnover frequency (TOF) of 0.44 h-1, and a production rate of 52.83 μL h-1, highlighting the effective catalytic activity of the (corrolato)(oxo)antimony(V) dimer in hydrogen evolution.

Synthesis of (Z)-Enediynes via Stereoinvertive Nucleophilic Substitution of (E)-Sulfonylethenes with Arylethynide, and Their Aggregation-Induced Optical Properties.

(Z)-Enediynes were successfully synthesized from a trio of terminal ethynes through consecutive three-step reactions: iodosulfonylation of ethyne with I2/PhSO2Na, followed by ethynylations of iodo and sulfonyl moieties of the resulting iodosulfonylethene via Sonogashira-Hagihara coupling and nucleophilic addition-elimination, respectively. The molecular structure of the obtained (Z)-enediyne was fully characterized by X-ray crystal structure analysis, revealing that the nucleophilic substitution of (E)-sulfonylethene with arylethynide underwent a selective stereoinversion. The (Z)-enediynes exhibited photoluminescence in both the solution and solid states (crystals and powders). Ph2N-substituted derivatives showed remarkable solvatofluorochromism, and upon replacing the solvent from toluene to acetonitrile, the emission color changed from blue to yellow.

Impact of morphology of hydrophilic and hydrophobic bentonites on improving the pour point in the recycling of waste cooking oils

Waste Cooking Oils (WCOs) are generated worldwide through industrial food processing and household use, posing environmental concerns upon disposal. Bentonites often showed to be effective in removing minor contaminants in vegetable oil refining. The present research focused on the processing of raw WCOs using four bentonites, two commercials and two obtained by ball milling of the latest. The different bentonites (hydrophobic and hydrophilic) were characterized before and after ball milling (BM) procedure, including an exhaustive analyses of crystal structure, morphology and surface area via x-ray diffraction (XRD), transmission electron microscopy (TEM), scanning electron microscopy (SEM), and N2-physisorption technique. Optimization of BM processing in terms of milling time was achieved within 60 min. The milled powders were then tested as adsorbents for recycling WCOs with different degrees of decomposition (expressed in terms of free fatty acids, FFAs, content). Employing a design of experiments approach, the impact of five parameters (FFAs content, temperature, specific surface area, stirring, BM time) on the resulting pour point (PP), taken as a quality benchmark for recycled oil, was assessed. Quantitative multivariate statistical analysis revealed temperature's negligible role and identified the significant impact of two characteristics of the bentonite (specific superficial area and ball milling time), as well as the relevant role of the stirring during the treatment. At the end, hydrophilic bentonite resulted able to improve the PP of waste oils with a low content of free fatty acids of about 10 °C.

Gradual spin crossover behavior encompasing room temperature in an iron(II) complex based on a heteroscorpionate ligand.

In this paper, we report the synthesis of six novel triazole-based heteroscorpionate ligands based on heterocycle metathesis reactions and their iron(II) complexes. Single crystal structure analyses were performed, the spectroscopic and magnetic properties of the obtained complexes were studied and their spin crossover-structural relationships were compared to those obtained for their pyrazole-based analogues reported in the literature. In particular, the amino derivative complex bis[hydrobis(pyrazol-1-yl)(3-amino-1,2,4-triazol-1-yl)]iron(II) obtained by post-synthetic catalytic nitro-group reduction under pressure of hydrogen in an autoclave presents a scarce gradual spin crossover behavior at room temperature. The profile of the SCO curve can be explained by the presence of only relatively weak H bonds, spreading only in one dimension. Among the interesting spin transition behaviors observed for the different complexes, such stable, complete and gradual spin crossover at room temperature makes this neutral complex a good candidate for sublimation and future investigation as an active element notably for thermoreflectance-based surface microthermometry applications.

Tyramine as a Prolific Coformer in Crystal Engineering: Insights from Classical Crystal Structure Analysis and Electron Density Studies

Tyramine as a Prolific Coformer in Crystal Engineering: Insights from Classical Crystal Structure Analysis and Electron Density Studies

Unusual Metal–organic Multicomponent Ni(II) and Mononuclear Zn(II) Compounds Involving Pyridine dicarboxylates: Supramolecular Assemblies and Theoretical Studies

In the present work, we reported the synthesis and characterization [single crystal X-ray diffraction technique, spectroscopic, etc.] of two new Ni(II) and Zn(II) coordination compounds, viz. [Ni(2,6-PDC)2]2[Ni(en)2(H2O)2]2[Ni(en)(H2O)4]·4H2O (1) and [Zn(2,6-PDC)(Hdmpz)2] (2) (where 2,6-PDC = 2,6-pyridinedicarboxylate, en = ethylene-1,2-diamine, and Hdmpz = 3,5-dimethyl pyrazole). Compound 1 is found to crystallize as a multicomponent Ni(II) compound with five discrete complex moieties, whereas compound 2 is isolated as a mononuclear Zn(II) compound. A deep analysis of the crystal structure of 1 unfolds unusual dual enclathration of guest complex cationic moieties within the supramolecular host cavity stabilized by anion–π, π-stacking, N–H⋯O, C–H⋯O, and O–H⋯O hydrogen bonding interactions. Again, the crystal structure of compound 2 is stabilized by the presence of unconventional C–H⋯π(chelate ring) interactions along with C–H⋯O, C–H⋯N hydrogen bonding, π-stacking, and C–H⋯π(pyridyl) interactions. These non-covalent interactions were further studied theoretically using density functional theory (DFT) calculations, molecular electrostatic potential (MEP) surfaces, non-covalent interaction (NCI) plot index, and quantum theory of atoms in molecules (QTAIM) computational tools. The computational study displays that π-stacking or H bonds greatly tune the directionality of compound 1, although non-directional electrostatic forces dominate energetically. For compound 2, a combined QTAIM/NCI plot analysis confirms the presence of unconventional C–H⋯π(chelate ring) interactions along with other weak interactions obtained from the crystal structure analysis. Further, the individual energy contributions of these weak yet significant non-covalent interactions have also been determined computationally.

An Optically Active 4‐Aryl‐3,4‐dihydroisocoumarin‐3‐carboxylate

AbstractA four step sequence for the preparation of optically active (R,R)‐ethyl 4‐phenyl‐3,4‐dihydroisocoumarin‐3‐carboxylate is reported. In the first step the first stereocenter was installed by palladium catalyzed asymmetric conjugate addition of PhB(OH)2 to indenone (88 % ee). After deprotonation, the ester moiety was introduced with Mander's reagent. The α‐hydroxylation of the resulting β‐oxoester was then achieved with cerium‐catalysis under an air atmosphere. Key transformation was the cyanide‐catalyzed ring transformation of α‐hydroxy‐β‐oxoester furnishing the δ‐lactone moiety of the target compound, which was formed as a mixture of separable cis‐ and trans‐diastereoisomers, both with 88 % ee. The cis‐isomer could be epimerized to the trans‐compound. The relative trans and the absolute (R,R)‐configuration of the target compound was established by X‐ray single crystal structure analysis.

Influence of sulfurization process in tin sulfide and sulfur mixed vapors on the morphology of Cu2SnS3 thin films

Abstract Cu2SnS3 (CTS) is expected to be an absorber material for next-generation solar cells because it is composed of nontoxic, low-cost elements and has an absorption coefficient of >104 cm−1. In this study, the effects of sulfurization in tin sulfide (Sn x S y ) and S mixed vapors on various properties of CTS were investigated by using a 3-zone tube furnace to suppress carrier recombination at the grain boundaries and control the composition of the CTS. The CTS deposited via sulfurization in S vapor only (1-zone CTS) contained different monoclinic and tetragonal CTS structures. The grain size of the CTS thin films deposited via sulfurization in Sn x S y and S mixed vapors was not increased. On the other hand, crystal structure analysis revealed that the CTS had grown to single-phase monoclinic CTS. The results suggest that precipitation in Sn x S y and S mixed vapors contributes to the growth of monoclinic CTS with suitable power-generation characteristics. This finding is important for realizing high-efficiency CTS-based solar cells.

Material-Sparing Approach to Predict Tablet Capping Under Processing Compression Conditions Based on Mechanical and Molecular Properties Derived from Compaction Simulation and Crystal Structural Analysis.

Present study evaluates the usability of compaction simulation-based mechanical models as a material-sparing approach to predict tablet capping under processing compression conditions using Acetaminophen (APAP) and Ibuprofen (IBU). Measured mechanical properties were evaluated using principal component analysis (PCA) and principal component regression (PCR) models. PCR models were then utilized to predict the capping score (CS) from compression pressure (CP). APAP formulations displayed a quadratic correlation between CS and CP, with CS rank order following CP of 200MPa < 300MPa < 100MPa, indicating threshold compression pressure (TCP) limit between 200 and 300 MPa, resulting in higher CS at 300 than 200 MPa regardless of increased CP. IBU formulations displayed a linear correlation between CS and CP, with CS rank order following CP of 100MPa < 200MPa < 300MPa, indicating TCP limit between 100 and 200 MPa, resulting in higher CS at 200 and 300 than 100 MPa regardless of increased CP. Molecular models were developed as validation methods to predict capping from CP. Measured XRPD patterns of compressed tablets were linked with calculated Eatt and d-spacing of slip planes and analyzed using variable component least square methods to predict TCP triggering cleavage in slip planes and leading to capping. In APAP and IBU, TCP values were predicted at 245 and 175 MPa, meaning capped tablets above these TCP limits regardless of increased CP. A similar trend was observed in CS predictions from mechanical assessment, confirming that compaction simulation-based mechanical models can predict capping risk under desired compression conditions rapidly and accurately.

Tin-doped titanium dioxide film-enhanced electrocatalytic hydrogen evolution

Electrocatalyst water-splitting based on metal oxide nanocomposites has gained considerable interest in hydrogen evolution applications. Here, undoped titanium dioxide and tin-doped titanium dioxide films (TiO2 and Sn/TiO2, respectively) are presented for highly efficient H2 production applications. The crystal structure analysis is performed by analyzing the XRD patterns using the Rietveld refinement method and the Williamson-Hall method. XRF scans are used to confirm the doping mechanism between Sn and TiO2. The bandgap energies of undoped TiO2 and Sn/TiO2 films are 3.33 and 3.15 eV, respectively. On the other hand, the electrical conductivity values of undoped TiO2 and Sn/TiO2 films are 0.10 and 0.25 mS.cm−1, respectively. The electrochemical H2 production performance of undoped TiO2 and Sn/TiO2 films is investigated through two different methods: potentiostat measurements and analytical methods. It can be concluded that the Sn/TiO2 film exhibits higher HER performance and H2 production efficiency than the undoped TiO2 film.

Extended Unit Cell Model Employing Two Vectors for Crystal Structure Analysis in IrPd Nanoparticles for Catalysis

Extended Unit Cell Model Employing Two Vectors for Crystal Structure Analysis in IrPd Nanoparticles for Catalysis

A Dual-Focus Workflow for Simultaneously Engineering High Activity and Thermal Stability in Methyl Parathion Hydrolase.

Industrial fermentation applications typically require enzymes that exhibit high stability and activity at high temperatures. However, efforts to simultaneously improve these properties are usually limited by a trade-off between stability and activity. This report describes a computational strategy to enhance both activity and thermal stability of the mesophilic organophosphate-degrading enzyme, methyl parathion hydrolase (MPH). To predict hotspot mutation sites, we assembled a library of features associated with the target properties for each residue and then prioritized candidate sites by hierarchical clustering. Subsequent in silico screening with multiple algorithms to simulate selective pressures yielded a subset of 23 candidate mutations. Iterative parallel screening of mutations that improved thermal stability and activity yielded, MPHase-m5b, which exhibited 13.3 °C higher Tm and 4.2 times higher catalytic activity than wild-type (WT) MPH over a wide temperature range. Systematic analysis of crystal structures, molecular dynamics (MD) simulations, and quantum mechanics/molecular mechanics (QM/MM) calculations revealed a wider entrance to the active site that increased substrate access with an extensive network of interactions outside the active site that reinforced αβ/βα sandwich architecture to improve thermal stability. This study thus provides an advanced, rational design framework to improve efficiency in engineering highly active, thermostable biocatalysts for industrial applications.

A Dual‐Focus Workflow for Simultaneously Engineering High Activity and Thermal Stability in Methyl Parathion Hydrolase

AbstractIndustrial fermentation applications typically require enzymes that exhibit high stability and activity at high temperatures. However, efforts to simultaneously improve these properties are usually limited by a trade‐off between stability and activity. This report describes a computational strategy to enhance both activity and thermal stability of the mesophilic organophosphate‐degrading enzyme, methyl parathion hydrolase (MPH). To predict hotspot mutation sites, we assembled a library of features associated with the target properties for each residue and then prioritized candidate sites by hierarchical clustering. Subsequent in silico screening with multiple algorithms to simulate selective pressures yielded a subset of 23 candidate mutations. Iterative parallel screening of mutations that improved thermal stability and activity yielded, MPHase‐m5b, which exhibited 13.3 °C higher Tm and 4.2 times higher catalytic activity than wild‐type (WT) MPH over a wide temperature range. Systematic analysis of crystal structures, molecular dynamics (MD) simulations, and quantum mechanics/molecular mechanics (QM/MM) calculations revealed a wider entrance to the active site that increased substrate access with an extensive network of interactions outside the active site that reinforced αβ/βα sandwich architecture to improve thermal stability. This study thus provides an advanced, rational design framework to improve efficiency in engineering highly active, thermostable biocatalysts for industrial applications.

Dicarbatriphyrin(2.1.1) and its Carbacalix[1]phyrin Analogue: Structure-Property Relationships and Application as a Fe(III) Chemosensor.

The investigation of unsaturated or π-conjugated hydrocarbons, particularly within the macrocyclic framework, has garnered significant interest due to their fundamental properties and practical applications. This research focuses on the synthesis and characterization of a novel stable dicarbatriphyrin(2.1.1) which was constructed by amending the [14]triphyrin(2.1.1) framework by, replacing two pyrrole rings with meta-connected phenyl rings and introducing an o-benzene bridge at the C2 position. The structural modification resulted in a saddle-shaped macrocyclic core with negative Gaussian curvature, as confirmed by crystal structure analysis. This unique molecular topology offers acumens into the structure-property relationships in the curved locally π-conjugated contracted porphyrinoids. The macrocycle exhibits fluorescent emission in solution, which is selectively quenched by Fe(III) ions, highlighting its potential as a chemosensor for Fe(III) cations. Additionally, the formation of carbacalix[1]phyrin(2.1.1), a phlorin analogue of dicarbatriphyrin(2.1.1), which exhibits a chair conformation in contrast to the saddle-shaped structure of its oxidized counterpart. Remarkably, the emergence of a mono-pyrrolic calixbenziphyrin marks an unprecedented advancement in the field of calixphyrin chemistry. Moreover, theoretical studies provide strong support for the experimental findings, reinforcing the conclusions drawn from the structural and functional analyses.

Toward Strong UV-Vis-NIR Second-Harmonic Generation by Dimensionality Engineering of Zinc Thiocyanates.

The precise modulation of the spatial orientations and connection modes of primitives is vital for certain critically important optical functions for nonlinear optical (NLO) materials (specifically, second-harmonic generation (SHG) and optical bandgap); however, we are yet to achieve a sufficient level of control for the designed construction of efficient broadband NLO materials. Exploiting the changes in microscopic polarization that may result from dimensional increase, we propose herein a zero-dimensional (0D)-to-three-dimensional (3D) dimensionality-increase strategy to realize strong broadband SHG responses for the first time. The novel 3D pseudo diamond-like Zn(SCN)2 has been synthesized by removing SHG-inactive [NH4]+ counter cations and H2O molecules that are located between the adjacent discrete [Zn(SCN)4] building blocks within the 0D (NH4)2Zn(SCN)4·3H2O. The 0D-to-3D dimensionality engineering, proceeding from (NH4)2Zn(SCN)4·3H2O to Zn(SCN)2, results in significantly enhanced SHG responses and efficient broadband activity (8 × KH2PO4 @ 1064 nm, 4.18 eV bandgap for the former c.f. 2 × β-BaB2O4 @ 380 nm, 30 × KH2PO4 @ 1064 nm, 2 × KTiOPO4 @ 2100 nm, 4.78 eV bandgap for the latter) from the UV to the NIR regions (SHG@300-1050 nm). Theoretical calculations and crystal structure analyses reveal that the coordination-bond-connected [Zn(SCN)4] building blocks within the diamond-like structure of Zn(SCN)2 are responsible for its giant broadband SHG responses.

Storehouse of Peculiar Supramolecular Architecture: Probing the Charge-Transfer Phenomenon and Effect of Altering the pH in a Meta-Oriented Single Donor-Double Acceptor Fluorophore.

The investigation of excited-state intramolecular charge transfer (ESICT) has been a fascinating area of research. Although the ESICT events have been studied mostly for para-disubstituted donor-acceptor type molecules, the meta-oriented donor-acceptor type molecules have also shown tremendous potential as ESICT active molecules. In the current work, a small fluorescent probe diethyl 5-amino isophthalate (DE-5A-IPA) was investigated as a potential model to investigate ESICT events in the solution as well as solid phase. DE-5A-IPA was synthesized easily starting from commercially available 5-amino isophthalic acid in excellent yield. In the solid state, differing extents of CH···π-type binding led to formation of fully planar and puckered "cyclobutane" mimic supramolecular architecture, as evidenced from the crystal structure analysis. In addition, the single crystal structure of DE-5A-IPA shows that the donor (-NH2) and acceptor (-CO2Et) are situated in the same plane, thereby assuring the prerequisites of a through-space charge transfer. DE-5A-IPA undergoes noticeable Stokes shift (in cm-1) when the polarity of the medium was changed (4820 cm-1 in hexane; 9375 cm-1 in water). The excited-state dipole moment (μe) was calculated to be 4.0 units higher than the ground-state dipole moment (μg). DE-5A-IPA had an appreciable quantum yield (0.10 ± 0.03 to 0.27 ± 0.04). The ESICT phenomenon was also investigated by ground- and excited-state structural calculations using Gaussian 16 software. The excited-state lifetime measured by the time correlated single photon counting technique was found to vary with the polarity of the solvent, thereby providing further support to the ESICT phenomenon being operative in DE-5A-IPA. Taking advantage of the -NH2 group (which is susceptible to protonation) in DE-5A-IPA, steady state and time-resolved photodynamics were investigated in solutions of varying pH values. Interestingly, the emission quantum yields as well as the emission lifetime increase with an increase in pH value, thereby establishing DE-5A-IPA as a pH-sensitive probe. The current findings shall boost the understanding of meta-oriented ESICT enabled compounds in terms of their excited-state photophysics.

Characterization and Crystal Structural Analysis of Novel Carvedilol Adipate and Succinate Ethanol-Solvated Salts

Two ethanol-solvated adipate and succinate salts of carvedilol (CVD), a Biopharmaceutics Classification System class 2 drug, were synthesized by crystallizing ethanol with adipic acid (ADP) and succinic acid (SUA). Proton transfer from ADP and SUA to CVD and the presence of ethanol in the two novel compounds were confirmed using powder X-ray diffraction, Fourier transform infrared spectroscopy, differential scanning calorimetry, thermogravimetric analysis, and single-crystal X-ray diffraction measurements. The two novel ethanol-solvated salts exhibited enhanced solubility and dissolution rates compared with pure carvedilol in phosphate buffer (pH 6.8). Additionally, the morphologies and attachment energies of the two novel compounds and pure CVD were calculated based on their single-crystal structures, revealing a correlation between attachment energy and dissolution rate.

Two new coordination polymers of Mn(II) and Co(II) based on a tripyridyl derivative ligand: Synthesis, crystal structures and properties

Two coordination polymers, [Mn(cpt)2)]n (C56H36MnN6O6)(1) and [Co(cpt)2)]n (C56H36CoN6O6) (2), have been synthesized under hydrothermal conditions using 4′-(4-(4-carboxyphenyloxy)phenyl)-4,2′:6′,4′-tripyridine (Hcpt) as the ligand. These ploymers have been structurally characterized. The crystal structure analyses of the two synthesized compounds revealed that both Mn(Ⅱ) and Co(Ⅱ) are six-coordinated, exhibiting a distorted octahedral coordination geometry. Additionally, the compounds share an isostructural two-dimensional framework. The various intermolecular interactions within the crystal structures were further examined using Hirshfeld surface analysis. The in vitro antimicrobial assay of the two compounds demonstrated good antibacterial activity against P.aeruginosa and S. aureus. Furthermore, the fluorescence, magnetic properties, and photocatalytic properties were investigated at room temperature.

Tetradentate Pt(II) Complexes Based on Xylenylamino Linked Dual Pyrazolate Chelates for Organic Light Emitting Diodes.

In this work, we report the syntheses of three Pt(II) emitters, namely, Pt4N1, Pt4N2, and Pt4N3, to which their tetradentate chelates were assembled by linking two pyrazolate chelates with a single xylenylamino entity. Functionalization of Pt4N1 was achieved upon the addition of electronegative CF3 substituent on pyridinyl groups and switching to more electron-deficient pyrazinyl groups in giving Pt4N2 and Pt4N3, respectively. The vertically arranged xylenylamino entity has effectively suppressed the inter-molecular π-π stacking and Pt⋅⋅⋅Pt interaction, as shown by the single crystal X-ray structural analyses. Upon fabrication of OLED devices, Pt4N2 and Pt4N3 based devices delivered efficient cyan and green emission, with an EQEmax of 15.2 % and 11.2 %, respectively, affirming the successfulness of the tetradentate chelating strategy.