Abstract The Galápagos Archipelago lies on the equator in the path of the eastward flowing Pacific Equatorial Undercurrent (EUC). When the EUC reaches the archipelago, it upwells and bifurcates into a north and south branch around the archipelago at a latitude determined by topography. Since the Coriolis parameter (f) equals zero at the equator, strong velocity gradients associated with the EUC can result in Ertel potential vorticity (Q) having sign opposite that of planetary vorticity near the equator. Observations collected by underwater gliders deployed just west of the Galápagos Archipelago during 2013–16 are used to estimate Q and to diagnose associated instabilities that may impact the Galápagos Cold Pool. Estimates of Q are qualitatively conserved along streamlines, consistent with the 2.5-layer, inertial model of the EUC by Pedlosky. The Q with sign opposite of f is advected south of the Galápagos Archipelago when the EUC core is located south of the bifurcation latitude. The horizontal gradient of Q suggests that the region between 2°S and 2°N above 100 m is barotropically unstable, while limited regions are baroclinically unstable. Conditions conducive to symmetric instability are observed between the EUC core and the equator and within the southern branch of the undercurrent. Using 2-month and 3-yr averages, e-folding time scales are 2–11 days, suggesting that symmetric instability can persist on those time scales. Significance Statement The Pacific Ocean contains fast-moving currents near the equator and below the surface that result in instabilities and mixing. The Galápagos Archipelago lies directly in the path of the eastward-flowing Pacific Equatorial Undercurrent. There are few observations of what happens to the current when it reaches the Galápagos Archipelago, so theories and models of the instabilities and mixing resulting from these strong currents have not been well verified. The Repeat Observations by Gliders in the Equatorial Region (ROGER) project deployed autonomous underwater gliders to observe the current system in this region. The results show that a range of instabilities may be responsible for the cold sea surface temperature of the Galápagos Cold Pool and the generation of tropical instability waves.
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