Coral Reef Habitats Research Articles

Cross-scale Habitat Structure Drives Fish Body Size Distributions on Coral Reefs

Despite a large number of studies focusing on the complexity of coral reef habitats and the characteristics of associated fish assemblages, the relationship between reef structure and fish assemblages remains unclear. The textural discontinuity hypothesis, which proposes that multi-modal body size distributions of organisms are driven by discontinuous habitat structure, provides a theoretical basis that may explain the influence of habitat availability on associated organisms. In this study we use fractal techniques to characterize patterns of cross-scale habitat complexity, and examine how this relates to body-depth abundance distributions of associated fish assemblages over corresponding spatial scales. Our study demonstrates that: (1) Reefs formed from different underlying substrata exhibit distinct patterns of cross-scale habitat complexity; (2) The availability of potential refuges at different scales correlates with patterns in fish body depth distributions, but habitat structure is more strongly related to the relative abundance of fish in the body depth modes, rather than to the number of modes; (3) As reefs change from coral- to algal-dominated states, the complexity of the underlying reef substratum may change, presenting a more homogenous environment to associated assemblages; (4) Individual fish body depth distributions may be multi-modal, however, these distributions are not static characteristics of the fish assemblage and may change to uni-modal forms in response to changing habitat condition. In light of predicted anthropogenic changes, there is a clear need to improve our understanding of the scale of ecological relationships to anticipate future changes and vulnerabilities.

Patterns of recruitment and microhabitat associations for three predatory coral reef fishes on the southern Great Barrier Reef, Australia

This study examined recruitment patterns and microhabitat associations for three carnivorous fishes, Plectropomus maculatus, Lutjanus carponotatus and Epinephelus quoyanus, at the Keppel Islands, southern Great Barrier Reef, Australia. Habitat selectivity was highest for recruits that were found mostly with corymbose Acropora, predominantly on patches of live coral located over loose substrates (sand). Adults were more commonly associated with tabular Acropora. The proportion of P. maculatus (72 %) found with live corals was higher than for L. carponotatus (68 %) and E. quoyanus (44 %). Densities of recruits were highly variable among locations, but this was only partly related to availability of preferred microhabitats. Our findings demonstrate that at least some carnivorous reef fishes, especially during early life-history stages, strongly associate with live corals. Such species will be highly sensitive to increasing degradation of coral reef habitats.

Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat

Abstract Harris, P. T., Bridge, T. C. L., Beaman, R. J., Webster, J. M., Nichol, S. L., and Brooke, B. P. 2013. Submerged banks in the Great Barrier Reef, Australia, greatly increase available coral reef habitat. – ICES Journal of Marine Science, 70: 284–293. Anthropogenic global ocean warming is predicted to cause bleaching of many near-sea-surface (NSS) coral reefs, placing increased importance on deeper reef habitats to maintain coral reef biodiversity and ecosystem function. However, the location and spatial extent of many deep reef habitats is poorly known. The question arises: how common are deep reef habitats in comparison with NSS reefs? We used a dataset from the Great Barrier Reef (GBR) to show that only about 39% of available seabed on submerged banks is capped by NSS coral reefs (16 110 km2); the other 61% of bank area (25 600 km2) is submerged at a mean depth of around 27 m and represents potential deep reef habitat that is spatially distributed along the GBR continental shelf in the same latitudinal distribution as NSS reefs. Out of 25 600 km2 of submerged bank area, predictive habitat modelling indicates that more than half (around 14 000 km2) is suitable habitat for coral communities.

Predicting the location and spatial extent of submerged coral reef habitat in the Great Barrier Reef world heritage area, Australia.

AimCoral reef communities occurring in deeper waters have received little research effort compared to their shallow-water counterparts, and even such basic information as their location and extent are currently unknown throughout most of the world. Using the Great Barrier Reef as a case study, habitat suitability modelling is used to predict the distribution of deep-water coral reef communities on the Great Barrier Reef, Australia. We test the effectiveness of a range of geophysical and environmental variables for predicting the location of deep-water coral reef communities on the Great Barrier Reef.LocationGreat Barrier Reef, Australia.MethodsMaximum entropy modelling is used to identify the spatial extent of two broad communities of habitat-forming megabenthos phototrophs and heterotrophs. Models were generated using combinations of geophysical substrate properties derived from multibeam bathymetry and environmental data derived from Bio-ORACLE, combined with georeferenced occurrence records of mesophotic coral communities from autonomous underwater vehicle, remotely operated vehicle and SCUBA surveys. Model results are used to estimate the total amount of mesophotic coral reef habitat on the GBR.ResultsOur models predict extensive but previously undocumented coral communities occurring both along the continental shelf-edge of the Great Barrier Reef and also on submerged reefs inside the lagoon. Habitat suitability for phototrophs is highest on submerged reefs along the outer-shelf and the deeper flanks of emergent reefs inside the GBR lagoon, while suitability for heterotrophs is highest in the deep waters along the shelf-edge. Models using only geophysical variables consistently outperformed models incorporating environmental data for both phototrophs and heterotrophs.Main ConclusionExtensive submerged coral reef communities that are currently undocumented are likely to occur throughout the Great Barrier Reef. High-quality bathymetry data can be used to identify these reefs, which may play an important role in resilience of the GBR ecosystem to climate change.

Accuracy of IKONOS for mapping benthic coral-reef habitats: a case study from the Puerto Morelos Reef National Park, Mexico

Reefs are being threatened by global warming, natural disasters, and the increased pressure of the global population. These habitats are in urgent need of mapping at high resolution so that these threats can be quantified. Remote sensing can potentially provide such quantitative data. In this article, we attempt to map benthic coral-reef habitats at the Puerto Morelos Reef National Park in Yucatan Peninsula (México) and to assess the accuracy of the technique in providing a baseline data for future monitoring of changes and evolution of the reef system. An IKONOS image was used in combination with checkpoint ground sampling and classified using a supervised maximum likelihood classifier (ENVI 4.5). We show that it is possible to map the reef with acceptable accuracy for the lagoon and discriminate the main habitat types, including vegetation, corals, and bare substrate. But, in areas close to the shore and in the front-reef zone, there were significant misclassifications as well as a failure to delineate spatial structures evident on the ground and in aerial imagery. These difficulties and failures occurred either in the areas deeper than 5–8 m where depth limits light transmission (particularly in the red channel) or when the spectral response of habitats were too close to be discriminated. This highlights the need to combine these data with other methods, such as acoustic mapping, in order to provide more accurate representations of the benthic habitats of entire reef systems.

Compromises between international habitat conservation guidelines and small‐scale fisheries in Pacific island countries

AbstractWallis, Alofi, and Futuna are three small islands in the central Pacific Ocean, characterized by different reef geomorphologies. Following a request from the local Environment Service, we developed an indicative conservation plan for each island with two objectives: (1) representing 20% of the extent of each coral reef habitat within no‐take areas while (2) keeping all subsistence fishing grounds open for extraction. The first objective was more ambitious than the current Convention on Biological Diversity (Aichi) targets. We found that both objectives could not be achieved simultaneously and that large compromises are needed. Due to the small size of these islands, and the dependence of local communities on coral reef resources, the fishery objective significantly limited the extent of most habitats available for conservation. The problem is exacerbated if the conservation plan uses larger conservation units and more complex habitat typologies. Our results indicate that international conservation guidelines should be carefully adapted to small Pacific islands and that incentives to make feasible the necessary reductions in available fishing grounds will probably be needed.

The continuing decline of coral reefs in Bahrain

Historically coral reefs of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain’s reefs have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major coral reef habitats around Bahrain and a reef located 72km offshore. Fleshy and turf algae now dominate Bahrain’s reefs (mean: 72% cover), and live coral cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama reef had the highest coral cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All reefs for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts.

The importance of the terrestrial weathering feedback for multimillennial coral reef habitat recovery

Modern‐day coral reefs have well defined environmental envelopes for light, sea surface temperature (SST) and seawater aragonite saturation state (Ωarag). We examine the changes in global coral reef habitat on multimillennial timescales with regard to SST and Ωaragusing a climate model including a three‐dimensional ocean general circulation model, a fully coupled carbon cycle, and six different parameterizations for continental weathering (the UVic Earth System Climate Model). The model is forced with emission scenarios ranging from 1,000 Pg C to 5,000 Pg C total emissions. We find that the long‐term climate change response is independent of the rate at which CO2 is emitted over the next few centuries. On millennial timescales, the weathering feedback introduces a significant uncertainty even for low emission scenarios. Weathering parameterizations based on atmospheric CO2 only display a different transient response than weathering parameterizations that are dependent on temperature. Although environmental conditions for SST and Ωaragstay globally hostile for coral reefs for millennia for our high emission scenarios, some weathering parameterizations induce a near‐complete recovery of coral reef habitat to current conditions after 10,000 years, while others result in a collapse of coral reef habitat throughout our simulations. We find that the multimillennial response in sea surface temperature (SST) substantially lags the aragonite saturation recovery in all configurations. This implies that if corals can naturally adapt over millennia by selecting thermally tolerant species to match warmer ocean temperatures, prospects for long‐term recovery of coral reefs are better since Ωarag recovers more quickly than SST.

Artificial Islands versus Natural Reefs: The Environmental Cost of Development in Dubai

While coral communities world-wide are currently threatened by a wide variety of factors, Persian Gulf corals are especially fragile due to human-caused factor sranging from oil spills, industrial thermal and substance effluents and military actions, as well as harsh environmental factors such as high salinity, extreme water temperatures and tidal action. In the United Arab Emirates, Dubai’s renowned real-estate boom has especially compromised formerly protected coral communities with the construction and development of the largest artificial islands in the world.Environmental protests have helped call attention to the tragedy, but much more proactive protection is necessary to ensure the survival and health of these endangered coral reef habitats.

Fish biodiversity in coral reefs and lagoon at the Maratua Island, East Kalimantan

Madduppa HH, Agus SB, Farhan AR, Suhendra D, Subhan B. 2012. Fish biodiversity in coral reefs and lagoon at the Maratua Island, East Kalimantan. Biodiversitas 13: 145-150. Fishes are one of the most important biotic components in the aquatic environment. They are filling different habitats, including coral reef and lagoon. This study aims to (i) assess biodiversity in coral reef and lagoon in Maratua Island, East Kalimantan, and (ii) compare the fish community indices (Shannon-Wiener diversity, Evenness, and Dominance) between the coral reef and lagoon. A total of 159 fish species of belonging to 30 families were observed during five visual census of the study period. The number of species on coral reefs is higher (121 species) than in the lagoons (47 species). Relative abundance (%) of each species also varied and did not form a specific pattern. However, a clear cluster between the coral reef and lagoon habitats fromfish relative abundance based on multivariate analysis and dendogram Bray-Curtis Similarity was revealed. The Evenness index value (E) ranged from 0.814 to 0.874, the dominance index (C) ranged from 0.023 to 0.184, and the Shannon-Wiener diversity index (ln base, H') ranged from 1.890 to 4.133. Fish biodiversity in coral reefs was higher (H'= 3.290±0.301) than in the lagoon (H' = 2.495±0.578).

Algivory in hawksbill turtles: Eretmochelys imbricata food selection within a foraging area on the Northern Great Barrier Reef

AbstractThis paper describes the food selection of hawksbill turtles, Eretmochelys imbricata, using reefs of the Far Northern Section of the Great Barrier Reef Marine Park (nGBR) during 2006 and 2007. A total of 467 gastric lavage and 71 buccal cavity ingesta items were collected from 120 individual E. imbricata, comprising adult female and immature turtles of both sexes. Nineteen E. imbricata that were captured in 2006 were recaptured and sampled again in 2007. Within the total pooled buccal and lavage sample (n = 538), the occurrence of food items was dominated (72.7%) by only three algal taxonomic divisions: Rhodophyta (red algae; 53.7%, n = 289); Chlorophyta (green algae; 11.0%, n = 59) and algae from the division of Phaeophyceae (brown algae; 8.0%, n = 43). The remaining total (buccal and lavage) ingesta sample comprised sponges (10.4%, n = 56), soft corals and a wide variety of possibly nutritionally important invertebrate species (12.6%, n = 68), and a small percentage (5.4%, n = 22) of inorganic material. Generally, E. imbricata were considered to be primarily a sponge‐feeding specialist and secondarily an omnivorous species; within coral reef habitats and in various parts of the world this is the case. However, this study has shown that E. imbricata found foraging on reefs of the nGBR are primarily algivorous and secondarily omnivorous. A feeding strategy that relies on a predominantly algal diet may infer important benefits to the species if the impacts of climate change and ocean acidification inhibit coral growth, while promoting algal density and distribution within the Great Barrier Reef ecosystem.

Increasing suspended sediment reduces foraging, growth and condition of a planktivorous damselfish

Increasing sediment inputs into many coastal marine environments are having a profound influence on shallow marine habitats and their constituent species. Coral reef habitats appear to be particularly sensitive, with increased sediment deposition and turbidity regimes associated with declines in the abundance and diversity of coral reef fishes due to an indirect effect of habitat loss. The direct causes of these declines are largely unknown. In this study we tested the hypothesis that suspended sediment can negatively affect the foraging efficiency, nutritional state and survival of the planktivorous coral reef damselfish, Acanthochromis polyacanthus. Food acquisition, growth rate and body condition were measured in juvenile A. polyacanthus subjected to four experimental concentrations of suspended sediment (up to 180mgl−1; 30 NTU). There was a clear effect of suspended sediment on food acquisition. Fish took longer to find food and consumed less of the food provided with increasing sediment. The decline in food acquisition was associated with a significant reduction in juvenile growth and body condition. Fish reared in the medium and high sediment treatments increased in size by less than half the growth rates observed in the control group. Fish held in the control and low sediment treatment had double the surface area of hepatocyte vacuoles in the liver (a proxy for lipid storage) than the fish held in the medium and high sediment treatments. Suspended sediment also caused a significant increase in mortality of the juvenile fish in the high sediment treatment. Mortality reached almost 50% in the high sediment treatment, with no mortality in the control and less than 10% in the intermediate treatments. This study underscores the need to ameliorate increasing suspended sediment in inshore waters due to its potential impact on the growth and survival of planktivorous organisms, which form a vital trophic link between secondary production and fish biomass.

Effects of Oceanic Salinity on Body Condition in Sea Snakes

Since the transition from terrestrial to marine environments poses strong osmoregulatory and energetic challenges, temporal and spatial fluctuations in oceanic salinity might influence salt and water balance (and hence, body condition) in marine tetrapods. We assessed the effects of salinity on three species of sea snakes studied by mark-recapture in coral-reef habitats in the Neo-Caledonian Lagoon. These three species include one fully aquatic hydrophiine (Emydocephalus annulatus), one primarily aquatic laticaudine (Laticauda laticaudata), and one frequently terrestrial laticaudine (Laticauda saintgironsi). We explored how oceanic salinity affected the snakes' body condition across various temporal and spatial scales relevant to each species' ecology, using linear mixed models and multimodel inference. Mean annual salinity exerted a consistent and negative effect on the body condition of all three snake species. The most terrestrial taxon (L. saintgironsi) was sensitive to salinity over a short temporal scale, corresponding to the duration of a typical marine foraging trip for this species. In contrast, links between oceanic salinity and body condition in the fully aquatic E. annulatus and the highly aquatic L. laticaudata were strongest at a long-term (annual) scale. The sophisticated salt-excreting systems of sea snakes allow them to exploit marine environments, but do not completely overcome the osmoregulatory challenges posed by oceanic conditions. Future studies could usefully explore such effects in other secondarily marine taxa such as seabirds, turtles, and marine mammals.

Environmental controls on the global distribution of shallow‐water coral reefs

AbstractAim Elucidating the environmental limits of coral reefs is central to projecting future impacts of climate change on these ecosystems and their global distribution. Recent developments in species distribution modelling (SDM) and the availability of comprehensive global environmental datasets have provided an opportunity to reassess the environmental factors that control the distribution of coral reefs at the global scale as well as to compare the performance of different SDM techniques.Location Shallow waters world‐wide.Methods The SDM methods used were maximum entropy (Maxent) and two presence/absence methods: classification and regression trees (CART) and boosted regression trees (BRT). The predictive variables considered included sea surface temperature (SST), salinity, aragonite saturation state (ΩArag), nutrients, irradiance, water transparency, dust, current speed and intensity of cyclone activity. For many variables both mean and SD were considered, and at weekly, monthly and annually averaged time‐scales. All were transformed to a global 1° × 1° grid to generate coral reef probability maps for comparison with known locations. Model performance was compared in terms of receiver operating characteristic (ROC) curves and area under the curve (AUC) scores. Potential geographical bias was explored via misclassification maps of false positive and negative errors on test data.Results Boosted regression trees consistently outperformed other methods, although Maxent also performed acceptably. The dominant environmental predictors were the temperature variables (annual mean SST, and monthly and weekly minimum SST), followed by, and with their relative importance differing between regions, nutrients, light availability and ΩArag. No systematic bias in SDM performance was found between major coral provinces, but false negatives were more likely for cells containing ‘marginal’ non‐reef‐forming coral communities, e.g. Bermuda.Main conclusions Agreement between BRT and Maxent models gives predictive confidence for exploring the environmental limits of coral reef ecosystems at a spatial scale relevant to global climate models (c. 1° × 1°). Although SST‐related variables dominate the coral reef distribution models, contributions from nutrients, ΩArag and light availability were critical in developing models of reef presence in regions such as the Bahamas, South Pacific and Coral Triangle. The steep response in SST‐driven probabilities at low temperatures indicates that latitudinal expansion of coral reef habitat is very sensitive to global warming.

New records of benthic marine green algae (Chlorophyta) for the island of Hainan (China)

The island of Hainan (China) is located on the northern periphery of the subtropical Pacific Ocean in the South China Sea and possesses one of the most prominent fringing coral reefs of China. The marine algal flora of the island was described for the first time after several early expeditions in the 1930's (and around 1960) mentioning 68 species of marine green algae (Chlorophyta) in total. Sixty years later, the island was revisited in autumn 1990 and spring 1992 within in the framework of two extensive expeditions in order to scrutinise the algal biodiversity of the coral reef habitats. Again 20 years later, three more surveys were performed in 2008, 2009 and 2010 focusing only on the southern shores of Hainan Island near Sanya city. The analysis of this material revealed the existence of 31 new records of marine green algae for Hainan Island, including 17 species which also constitute new records for China. The new records are described and characteristic details are depicted. Collection sites around Hainan Island and world-wide distributions are given. Thirteen newly recorded species were only sampled once and therefore seem to be rare. Thirteen other species are pre-dominantly epiphytic or endophytic. The new records for China are fairly typical for tropical to subtropical locations of south-western to south-eastern Asia, except Chlorochytrium cohnii (distribution hitherto restricted to Europe). Chaetomorpha minima (distribution hitherto restricted to North and Central America, Africa, Indian Ocean islands) and Cladophora perpusilla (distribution hitherto restricted to Central and South America, Australia, New Zealand, Pacific islands). None of the new records are considered to represent an invasive species.

Importance of mangrove shorelines for rainbow parrotfish Scarus guacamaia: habitat suitability modeling in a subtropical bay

Rainbow parrotfish Scarus guacamaia is a coral-reef herbivore that requires both mangrove and coral-reef habitat to complete its life cycle. This species is listed as 'vulnerable' by the International Union for Conservation of Nature. The present study used a long-term visual sur- vey of mangrove fishes to develop a predictive habitat model for juvenile S. guacamaia. The fac- tors tested were temperature, dissolved oxygen, salinity, average depth, distance from offshore channel openings, temperature variation (ΔT), and salinity variation (ΔS). The average depth, dis- tance from offshore channel openings, ΔT, and ΔS emerged as significant within the model evalu- ations. The results suggested that high variation in salinity reduces mangrove habitat suitability for this species. Salinity variation along many of south Florida's coastal bays is largely driven by water management-related freshwater canal discharges. Everglades restoration efforts seek to reduce ΔS along south Florida's mainland shoreline; thus, if successful, restoration may also confer benefits to Scarus guacamaia through the subsequent expansion of suitable mangrove habitat.

Traditional taxonomic groupings mask evolutionary history: a molecular phylogeny and new classification of the chromodorid nudibranchs.

Chromodorid nudibranchs (16 genera, 300+ species) are beautiful, brightly colored sea slugs found primarily in tropical coral reef habitats and subtropical coastal waters. The chromodorids are the most speciose family of opisthobranchs and one of the most diverse heterobranch clades. Chromodorids have the potential to be a model group with which to study diversification, color pattern evolution, are important source organisms in natural products chemistry and represent a stunning and widely compelling example of marine biodiversity. Here, we present the most complete molecular phylogeny of the chromodorid nudibranchs to date, with a broad sample of 244 specimens (142 new), representing 157 (106 new) chromodorid species, four actinocylcid species and four additional dorid species utilizing two mitochondrial markers (16s and COI). We confirmed the monophyly of the Chromodorididae and its sister group relationship with the Actinocyclidae. We were also able to, for the first time, test generic monophyly by including more than one member of all 14 of the non-monotypic chromodorid genera. Every one of these 14 traditional chromodorid genera are either non-monophyletic, or render another genus paraphyletic. Additionally, both the monotypic genera Verconia and Diversidoris are nested within clades. Based on data shown here, there are three individual species and five clades limited to the eastern Pacific and Atlantic Oceans (or just one of these ocean regions), while the majority of chromodorid clades and species are strictly Indo-Pacific in distribution. We present a new classification of the chromodorid nudibranchs. We use molecular data to untangle evolutionary relationships and retain a historical connection to traditional systematics by using generic names attached to type species as clade names.

Satellite imaging coral reef resilience at regional scale. A case-study from Saudi Arabia

We propose a framework for spatially estimating a proxy for coral reef resilience using remote sensing. Data spanning large areas of coral reef habitat were obtained using the commercial QuickBird satellite, and freely available imagery (NASA, Google Earth). Principles of coral reef ecology, field observation, and remote observations, were combined to devise mapped indices. These capture important and accessible components of coral reef resilience. Indices are divided between factors known to stress corals, and factors incorporating properties of the reef landscape that resist stress or promote coral growth. The first-basis for a remote sensed resilience index (RSRI), an estimate of expected reef resilience, is proposed. Developed for the Red Sea, the framework of our analysis is flexible and with minimal adaptation, could be extended to other reef regions. We aim to stimulate discussion as to use of remote sensing to do more than simply deliver habitat maps of coral reefs.

Performance of remote acoustic receivers within a coral reef habitat: implications for array design

Remote monitoring technologies are increasingly being implemented in the marine environment to better understand the movement patterns of taxa. Coral reefs are no exception. However, there is a paucity of information relating to the performance of acoustic receivers on coral reefs. Our results suggest that the detection performance of acoustic receivers may be significantly impacted by the unique nature of the reef environment. This study assessed the performance of passive acoustic receivers on a typical inner-shelf fringing reef, Orpheus Island, on the Great Barrier Reef, Australia. The detection range and diel performance variability of acoustic receivers was assessed using two parallel lines of 5 VR2W receivers spanning 125 m, deployed on the reef base and reef crest. Two 9-mm acoustic transmitters were moored at opposite ends of each receiver line. The working detection range for receivers was found to be approximately 90 m for the transmitter moored on the reef base and just 60 m for the transmitter moored on the reef crest. However, the detection range on the reef crest increased to 90 m when just the reef crest receivers were considered, highlighting importance of optimal receiver deployment. No diel patterns in receiver performance or detection capacities were detected, suggesting that no corrections are required when interpreting nocturnal versus diurnal activity patterns. We suggest that studies aiming for complete coverage of a site within a reef environment will require receivers in close (<100 m) proximity, and that the placement depth of receivers must be a major consideration, with shallow receivers exhibiting a greater detection range than those on the reef slope. Our results highlight the challenges imposed by coral reefs for acoustic telemetry and the importance of receiver placement for studies conducted within these habitats.

Responses of Cryptofaunal Species Richness and Trophic Potential to Coral Reef Habitat Degradation

Coral reefs are declining worldwide as a result of many anthropogenic disturbances. This trend is alarming because coral reefs are hotspots of marine biodiversity and considered the ‘rainforests of the sea. As in the rainforest, much of the diversity on a coral reef is cryptic, remaining hidden among the cracks and crevices of structural taxa. Although the cryptofauna make up the majority of a reef’s metazoan biodiversity, we know little about their basic ecology or how these communities respond to reef degradation. Emerging research shows that the species richness of the motile cryptofauna is higher among dead (framework) vs. live coral substrates and, surprisingly, increases within successively more eroded reef framework structures, ultimately reaching a maximum in dead coral rubble. Consequently, the paradigm that abundant live coral is the apex of reef diversity needs to be clarified. This provides guarded optimism amidst alarming reports of declines in live coral cover and the impending doom of coral reefs, as motile cryptic biodiversity should persist independent of live coral cover. Granted, the maintenance of this high species richness is contingent on the presence of reef rubble, which will eventually be lost due to physical, chemical, and biological erosion if not replenished by live coral calcification and mortality. The trophic potential of a reef, as inferred from the abundance of cryptic organisms, is highest on live coral. Among dead framework substrates, however, the density of cryptofauna reaches a peak at intermediate levels of degradation. In summary, the response of the motile cryptofauna, and thus a large fraction of the reef’s biodiversity, to reef degradation is more complex and nuanced than currently thought; such that species richness may be less sensitive than overall trophic function.