Convective Source Research Articles

Characteristics of sprite and gravity wave convective sources present in satellite IR images during the SpreadFEx 2005 in Brazil

Abstract. We developed a technique to identify and estimate the size, intensity, and Tropopause overshoot of thunderstorm convective cores expected to be significant sources of gravity waves. The work was based on GOES IR images of South America on the night of 30 September to 1 October and 25–26 October 2005, as part of the Spread F Experiment (SpreadFEx) in Brazil in 2005. We also characterized, for the first time, the convective activity of three small TLE producing thunderstorms that yielded 11 TLEs on 25–26 October 2005. The campaign occurred during the dry to wet season transition in central Brazil, marked by the presence of extra-tropical cyclogenesis over the Atlantic Ocean, and cold fronts penetrating inland. The Tropopause temperature was typically −76°C with a corresponding altitude of ~15 200 m. Vigorous convective cores capable of generating strong gravity waves were located in convective regions having areas with cloud top temperatures ≤−76°C. They had typical cloud-top temperature deficits of ΔT−2.0°C to −8.0°C from the average surroundings, implying overshoot heights of 200 to 3100 m, which are within the typical range. Fast vertical development and high horizontal growth rates were associated with a large number of simultaneously active vigorous convective cores, indicating that their dynamics may have determined the spatial-temporal development of the thunderstorms analyzed. Moderate convective cores were also present in areas with cloud top −76°C≤T≤−70°C. They had ΔT of −1.9°C to −5.3°C producing overshoots between 80–300 m. All convective cores had typical diameters of 5–20 km and their size tended to increase with ΔT, there was a 57% correlation between the two parameters. Analysis of the relationship of cloud top T with positive and negative cloud-to-ground lightning (+/−CG) occurrence rate and with peak current showed that lighting activity may provide an independent way to identify convective cores and measure their intensity, since they were characterized by a high incidence of low peak current −CGs that forms the bulk of the −CG population.

Characteristics of mesospheric gravity waves near the magnetic equator, Brazil, during the SpreadFEx campaign

Abstract. As part of the SpreadFEx campaign, coordinated optical and radio measurements were made from Brazil to investigate the occurrence and properties of equatorial Spread F, and to characterize the regional mesospheric gravity wave field. All-sky image measurements were made from two sites: Brasilia and Cariri located ~10° S of the magnetic equator and separated by ~1500 km. In particular, the observations from Brasilia provided key data in relatively close proximity to expected convective sources of the gravity waves. High-quality image measurements of the mesospheric OH emission and the thermospheric OI (630 nm) emission were made during two consecutive new moon periods (22 September to 9 November 2005) providing extensive data on the occurrence and properties of F-region depletions and regional measurements of the dominant gravity wave characteristics at each site. A total of 120 wave displays were observed, comprising 94 short-period events and 26 medium-scale gravity waves. The characteristics of the small-scale waves agreed well with previous gravity wave studies from Brazil and other sites. However, significant differences in the wave propagation headings indicate dissimilar source regions for the Brasilia and Cariri datasets. The observed medium-scale gravity wave events constitute an important new dataset to study their mesospheric properties at equatorial latitudes. These data exhibited similar propagation headings to the short-period events, suggesting they originated from the same source regions. Medium-scale waves are generally less susceptible to wind filtering effects and modeling studies utilizing these data have successfully identified localized regions of strong convection, mainly to the west of Brasilia, as their most likely sources (Vadas et al., 2009).

The variability of free tropospheric ozone over Beltsville, Maryland (39N, 77W) in the summers 2004–2007

Ozone profiles are often used to investigate day-to-day and year-to-year variability in origins of free tropospheric ozone. With this in mind, more than 50 ozonesonde launches were conducted in Beltsville, MD, during the summers of 2004 through 2007. Budgets of free tropospheric ozone were calculated for each ozone profile in the four summers using a laminar identification (LID) method and unusual episodes were analyzed with respect to meteorological variables. The laminar method showed that stratosphere-to-troposphere transport (ST) accounted for greater than 50% of the free tropospheric ozone column on 17% of days sampled, a more pronounced influence than regional convective and lightning (RCL) sources. The ST origins were confirmed with trajectories, and tracers (water vapor and potential vorticity). The amount of free tropospheric ozone from ST and RCL sources varied from year-to-year (up to 13%) and can be explained by differences in mean meteorological patterns. On average, almost 30% of the free tropospheric column was attributed to ST influence, about twice as much as RCL, although the LID method may not capture weeks-old lightning influences as in a chemical model. The prevalence of ST ozone in summertime Beltsville soundings was similar to six sounding sites in the IONS-04 campaign [Thompson, A.M., et al., 2007b. Intercontinental Transport Experiment Ozonesonde Network Study (IONS, 2004): 1. Summertime upper tropospheric/lower stratosphere ozone over northeastern North America. J. Geophys. Res. 112, D12S12; Thompson, A.M., et al., 2007c. Intercontinental Transport Experiment Ozonesonde Network Study (IONS, 2004): 2. Tropospheric ozone budgets and variability over northeastern North America. J. Geophys. Res. 112, D12S13.] and to statistics from a 30 year climatology of European soundings [Collette, A., Ancellet, G., 2005. Impact of vertical transport processes on the tropospheric ozone layering above Europe. Part II: Climatological analysis of the past 30 years. Atmos. Environ. 39, 5423–5435]. The Beltsville record also demonstrated the value of soundings for air quality forecasting in an urban area. The 22 nighttime soundings collected over Beltsville in 2004–2007 can be divided into distinct polluted and unpolluted subsets, the former 20 ppbv higher in residual layer ozone (1 km) than the latter. These distinctions propagated to daytime differences of 10 ppbv at the surface in the Washington, DC, area, with the high-ozone residual layers leading to non-attainment of the National Ambient Air Quality Standard for ozone. More frequent ozone observations aloft appear essential for better understanding ozone variability and for enabling air quality modelers to achieve more accurate ozone forecasts.

The cloud imaging and particle size experiment on the aeronomy of ice in the mesosphere mission: Cloud morphology for the northern 2007 season

The Aeronomy of Ice in the Mesosphere (AIM) mission was launched from Vandenberg Air Force Base in California at 4:26:03 EDT on April 25, 2007, becoming the first satellite mission dedicated to the study of noctilucent clouds (NLCs), also known as polar mesospheric clouds (PMC) when viewed from space. We present the first results from one of the three instruments on board the satellite, the Cloud Imaging and Particle Size (CIPS) instrument. CIPS has produced detailed morphology of the Northern 2007 PMC and Southern 2007/2008 seasons with 5 km horizontal spatial resolution. CIPS, with its very large angular field of view, images cloud structures at multiple scattering angles within a narrow spectral bandpass centered at 265 nm. Spatial coverage is 100% above about 70° latitude, where camera views overlap from orbit to orbit, and terminates at about 82°. Spatial coverage decreases to about 50% at the lowest latitudes where data are collected (35°). Cloud structures have for the first time been mapped out over nearly the entire summertime polar region. These structures include ‘ice rings’, spatially small but bright clouds, and large regions (‘ice-free regions’) in the heart of the cloud season essentially devoid of ice particles. The ice rings bear a close resemblance to tropospheric convective outflow events, suggesting a point source of mesospheric convection. These rings (often circular arcs) are most likely Type IV NLC (‘whirls’ in the standard World Meteorological Organization (WMO) nomenclature).

Stochastic modeling of evaporating sprays within a consistent hybrid joint PDF framework

In the present study, a framework for modeling two-phase evaporating flow is presented, which employs an Eulerian–Lagrangian–Lagrangian approach. For the continuous phase, a joint velocity-composition probability density function (PDF) method is used. Opposed to other approaches, such PDF methods require no modeling for turbulent convection and chemical source terms. For the dispersed phase, the PDF of velocity, diameter, temperature, seen gas velocity and seen gas composition is calculated. This provides a unified formulation, which allows to consistently address the different modeling issues associated with such a system. Because of the high dimensionality, particle methods are employed to solve the PDF transport equations. To further enhance computational efficiency, a local particle time-stepping algorithm is implemented and a particle time-averaging technique is employed to reduce statistical and bias errors. In comparison to previous studies, a significantly smaller number of droplet particles per grid cell can be employed for the computations, which rely on two-way coupling between the droplet and gas phases. The framework was validated using established experimental data and a good overall agreement can be observed.

A Model Study of Gravity Waves over Hurricane Humberto (2001)

Atmospheric gravity waves are known to influence global circulations. Understanding these waves and their sources help to develop parameterizations that include their effects in climate and weather forecasting models. Deep convection is believed to be a major source for these waves and hurricanes may be particularly intense sources. Simulations of Hurricane Humberto (2001) are studied using the fifth-generation Pennsylvania State University–National Center for Atmospheric Research (PSU–NCAR) Mesoscale Model (MM5). Humberto is simulated at both tropical storm and hurricane stages. Fourier transform and wavelet analysis are employed to investigate wave characteristics and their behavior in the lower stratosphere. The Fourier analysis gives a regional view of storm affects, whereas wavelet analysis gives a local picture of isolated events. Analysis of the movement of convective sources and local winds gives further insight into the mechanisms that can cause gravity waves. Convectively generated gravity waves are observed in the lower stratosphere of this model with horizontal scales of 15–300 km, vertical scales of 4–8 km, and intrinsic periods of approximately 20–100 min.

Water vapor transport and dehydration above convective outflow during Asian monsoon

We investigate the respective roles of large‐scale transport and convection in determining the water vapor maximum at 100 hPa in the Asian monsoon region. The study uses backward trajectories with ECMWF ERA‐Interim heating rates. It includes simple microphysics with supersaturation and takes into account convective sources based on CLAUS data with a simple parameterization of overshoots. A good agreement between reconstructed water vapor and observations is obtained over Asia. It is found that parcels belonging to the water vapor maximum have been first lifted by convection over the Bay of Bengal and the Sea of China and then transported through the tropical tropopause layer (TTL) via the monsoon anticyclonic circulation towards North‐West India, where they are eventually dehydrated, avoiding the coldest temperatures of the TTL. Convective moistening accounts for about 0.3 ppmv in the Asian monsoon region and overshoots do not have a significant impact on the water vapor budget.

Mechanisms of Low Cloud–Climate Feedback in Idealized Single-Column Simulations with the Community Atmospheric Model, Version 3 (CAM3)

Abstract This study investigates the physical mechanism of low cloud feedback in the Community Atmospheric Model, version 3 (CAM3) through idealized single-column model (SCM) experiments over the subtropical eastern oceans. Negative cloud feedback is simulated from stratus and stratocumulus that is consistent with previous diagnostics of cloud feedbacks in CAM3 and its predecessor versions. The feedback occurs through the interaction of a suite of parameterized processes rather than from any single process. It is caused by the larger amount of in-cloud liquid water in stratus clouds from convective sources, and longer lifetimes of these clouds in a warmer climate through their interaction with boundary layer turbulence. Thermodynamic effects are found to dominate the negative cloud feedback in the model. The dynamic effect of weaker subsidence in a warmer climate also contributes to the negative cloud feedback, but with about one-quarter of the magnitude of the thermodynamic effect, owing to increased low-level convection in a warmer climate.

Identification of the sources of inertia-gravity waves in the Andes Cordillera region

Abstract. Four major sources of inertia-gravity waves are known in the Earth atmosphere: upper-tropospheric jet-streams, lower-tropospheric fronts, convection and topography. The Andes Cordillera region is an area where all of these major sources are potentially present. By combining ECMWF and NCEP-NCAR reanalysis, satellite and radiosoundings data and mesoscale WRF simulations in the Andes Cordillera region, we were able to identify the cases where, respectively, the jet-stream source, the convective source and the topography source are predominantly in action. We retrieve emitted wave parameters for each case, compare them, and analyse possible emission mechanisms. The WRF mesoscale model shows very good performance in reproducing the inertia-gravity waves identified in the data analysis, and assessing their likely sources.

Distinct Modes of the East Asian Summer Monsoon*

Abstract Resolution of a complex Hermitian matrix derived from monthly mean 850-hPa wind fields during the summer season (June–August) from 1968 to 2004 revealed four different modes of East Asian summer monsoon (EASM) variability. The leading EASM mode, accounting for 19.6% of the variance, is characterized by two different modes (M11 and M12) or their combination. Both portray a closed cyclonic or anticyclonic circulation anomaly over the western North Pacific (WNP), South China Sea (SCS), and southeastern China; corresponding anomalous geopotential height fields show a wave train structure from the WNP across Japan, the Okhotsk Sea, and Alaska to North America. Thus, the leading EASM mode characterizes the teleconnection pattern of the WNP-EASM. The correlation between M11 (M12) and the dynamic index for the WNP-EASM is 0.85 (0.51). M11 has leading spectral peaks at 15 and 3 yr, whereas M12 displays a predominant peak at 2 yr. It is found that M11 has interdecadal variations, with the transition years being circa 1973 and 1989, respectively. M11 is closely related to air–sea interactions in the SCS and the northwestern Pacific, and its association with the convective heat source over the northwestern Pacific is secondary. In contrast, M12 is closely related to the tropical convective heat source rather than tropical western Pacific sea surface temperature (SST). The second EASM mode, accounting for 12.8% of the variance, is identified and characterized by two distinct and alternating modes or their linear combination (M21 and M22). One mode (M21) closely relates to the dual blocking high pattern detected in anomalous sea level pressure (SLP) and 500-hPa geopotential heights over the Ural Mountains and the Okhotsk Sea. The other (M22) corresponds to a dipole blocking anomaly in anomalous SLP and geopotential heights, with opposing anomalous centers in the south of Japan and the Korean peninsula, and the area between Lake Baikal and the Okhotsk Sea. M22 shows significant correlations with summer mean rainfall in southern and southeastern China. Thus, a single index of EASM is inappropriate for investigating and predicting the EASM.

Shifting of the convective heat source over the Indian Ocean region in relation to performance of monsoon: a satellite perspective

The TRMM Microwave Imager (TMI) is relatively unaffected by the presence of clouds, so the TMI provides excellent data sets for sea surface temperature (SST), sea surface wind speed (SWS) and total precipitable water vapour (TWV) over the Indian Ocean basin during the summer monsoon regime. We show here that rainfall peak in the month of July during the Indian summer monsoon is related to the unexpected inter‐annual and intra‐seasonal variability of SST over the Arabian Sea (AS) and South Central Indian Ocean in the months of April and May. There was a shift of mean convective heat source (SST>30°C) from the Western Indian Ocean (WIO) to the Central Equatorial Indian Ocean in April during deficient rainfall years (2002 and 2004). In May this convective source moved north to the Arabian Sea in 2003, (AS)/Bay of Bengal (BB) in 1998, whereas it moved to the Bay of Bengal in 2002 and 2004. The years 2002 and 2004 were below normal monsoon years (drought) with total seasonal rainfall being 71 cm and 76 cm respectively, whereas 1998 and 2003 were above normal monsoon years with total seasonal rainfall being 92 cm and 90 cm respectively. The gradual onset of monsoon (early start, slow growth to full strength), as in the case of 2004 or multiple onset (early start, then a lull and resumption to full strength) as in the case of 2002 (Simon et al.2006), especially in the beginning of May and subsequent upwelling, led to Arabian Sea cooling. This also resulted in reducing the convection in subsequent months and influenced the overall circulation patterns over the Indian subcontinent. The vertical winds (NCEP) averaged over the Arabian Sea in May show there is convection and cooling instead of the normal subsidence (0.5 Pa/s) for the years 2002 and 2004. The wind circulation at 200 hPa in May 2002 and 2004 shows a shift of its ridge position from its normal position of 50° E to 60° E (10° longitude) in 2002 and 2004. This may be a response to the shift in the convective heat source, resulting in reduced movement of depression from the Bay of Bengal. The shifting of the convective source would have resulted in shifting of the Walker circulation pattern 10° east of its normal position.

A new model for the CBL growth based on the turbulent kinetic energy equation

Starting from the evolution equation for the turbulent energy density spectrum (EDS), we develop a new model for the growth of the Convective boundary layer (CBL). We apply dimensional analysis to parameterize the unknown inertial transport and convective source term in the dynamic equation for the three-dimensional (3-D) spectrum and solve the 3-D EDS equation. The one-dimensional vertical spectrum is derived from the 3-D spectrum, employing a weight function. This allows us to select the magnitude of the vertical spectral component for the construction of the growing 3-D EDS. Furthermore, we employ the vertical component of the energy spectrum to calculate the eddy diffusivity (required in dispersion models). Currently there are no available experimental data to directly verify our EDS model.

Characteristics of inertio‐gravity waves revealed in rawinsonde data observed in Korea during 20 August to 5 September 2002

Characteristics of inertio‐gravity waves (IGWs) observed at six operational rawinsonde stations in Korea from 20 August to 5 September 2002 and their relationship with convective sources are investigated. Several types of convective systems, including mesoscale convective complexes and Typhoon Rusa, passed the Korean peninsula during the observing period. To categorize the observed waves with and without convective sources, wet and dry periods are defined at each observing site using hourly precipitation and satellite data. Although waves with extremely large values of intrinsic frequency and vertical wavelength are observed mostly in wet periods, the mean values of wave parameters for wet and dry periods are similar. Low‐frequency IGWs can originate far from and long before the observing sites, implying that it is unreasonable to correlate convective sources and observed waves at the same location and time. For better correlation of the observed waves and their sources, a three‐dimensional ray‐tracing model is used. A new wet case is defined on the basis of the occurrence of convection when and where a ray locates in mid‐to‐upper troposphere. Characteristics of the observed waves for new wet and dry cases differ significantly: the intrinsic frequency is larger but the horizontal wavelength is much smaller for wet than dry cases. Sources for wet cases are mostly convective clouds located northeast and southeast of the observing sites below 5 km. This is clearly distinguished from dry cases, where sources are located mostly in the northwest above 15 km and southeast far from the observing sites below 5 km.

Electrophysiological characterisation of the infrared organ of the Australian “Little Ash Beetle” Acanthocnemus nigricans (Coleoptera, Acanthocnemidae)

This study characterises the response properties of the sensilla located on the prothoracic disc organ of the beetle Acanthocnemus nigricans, such as intensity response functions and temporal coding properties. Warming the sensilla by a red laser accelerated their ongoing spiking activity, cessation of the stimulus suppressed their firing as revealed by extracellular recordings. Convective heat sources also increased sensillum activity, but stimuli of other modalities failed to elicit responses. The response threshold was between 11 and 25 mW/cm2 and latencies ranged between 20 and 40 ms. Repeating stimuli with frequencies between 5 and 20 Hz were reliably resolved by the sensilla. This temporal resolution enables the disc sensilla to represent behaviourally relevant changes in heat stimuli in a thermally patchy environment. These findings complement our knowledge on the sensory physiology of pyrophilous insects by hinting at two different, elementary orientation strategies evolved in the three pyrophilous beetle species described. A. nigricans seems to be best adapted to short-range orientation on freshly burnt areas.

Latitudinal Variations of the Convective Source and Propagation Condition of Inertio-Gravity Waves in the Tropics

Abstract Latitudinal variations of the convective source and vertical propagation condition of inertio-gravity waves (IGWs) in the tropical region (30°S–30°N) are examined using high-resolution Global Cloud Imagery (GCI) and 6-hourly NCEP–NCAR reanalysis data, respectively, for 1 yr (March 1985–February 1986). The convective source is estimated by calculating the deep convective heating (DCH) rate using the brightness temperature of the GCI data. The latitudinal variation of DCH is found to be significant throughout the year. The ratio of the maximum to minimum values of DCH in the annual mean is 3.2 and it is much larger in the June–August (JJA) and December–February (DJF) means. Spectral analyses show that DCH has a dominant period of 1 day, a zonal wavelength of about 1600 km, and a Gaussian-type phase-speed spectrum with a peak at the zero phase speed. The vertical propagation condition of IGWs is determined, in the zonal wavenumber and frequency domain, by two factors: (i) latitude, which determines the Coriolis parameter, and (ii) the basic-state wind structure in the target height range of wave propagation. It was found that the basic-state wind significantly influences the wave propagation condition in the lower stratosphere between 150 and 30 hPa, and accordingly a large portion of the source spectrum is filtered out. This is prominent not only in the latitudes higher than 15° where strong negative shear exists, but also near the equator where strong positive shear associated with the westerly phase of the quasi-biennial oscillation (QBO) filters out large portions of the low-frequency components of the convective source. There is no simple relationship between the ground-based frequency and latitude; lower latitudes are not always favorable for low-frequency IGWs to be observed in the stratosphere. The basic-state wind in the Tropics, which has seasonal, annual, and interannual variations, plays a major role not only in determining the wave propagation condition in the stratosphere but also in producing convective sources in the troposphere.

High-order well-balanced finite volume WENO schemes for shallow water equation with moving water

A characteristic feature of hyperbolic systems of balance laws is the existence of non-trivial equilibrium solutions, where the effects of convective fluxes and source terms cancel each other. Recently a number of so-called well-balanced schemes were developed which satisfy a discrete analogue of this balance and are therefore able to maintain an equilibrium state. In most cases, applications treated equilibria at rest, where the flow velocity vanishes. Here we present a new very high-order accurate, exactly well-balanced finite volume scheme for moving flow equilibria. Numerical experiments show excellent resolution of unperturbed as well as slightly perturbed equilibria.

Modeling the Interactions between Aerosols and Liquid Water Clouds with a Self-Consistent Cloud Scheme in a General Circulation Model

Abstract To model aerosol–cloud interactions in general circulation models (GCMs), a prognostic cloud scheme of cloud liquid water and amount is expanded to include droplet number concentration (Nd) in a way that allows them to be calculated using the same large-scale and convective updraft velocity field. In the scheme, the evolution of droplets fully interacts with the model meteorology. An explicit treatment of cloud condensation nuclei (CCN) activation enables the scheme to take into account the contributions to Nd of multiple aerosol species (i.e., sulfate, organic, and sea-salt aerosols) and to consider kinetic limitations of the activation process. An implementation of the prognostic scheme in the Geophysical Fluid Dynamics Laboratory (GFDL) AM2 GCM yields a vertical distribution of Nd with a characteristic maximum in the lower troposphere; this feature differs from the profile that would be obtained if Nd is diagnosed from the sulfate mass concentration based on an often-used empirical relationship. Prognosticated Nd exhibits large variations with respect to the sulfate mass concentration. The mean values are generally consistent with the empirical relationship over ocean, but show negative biases over the Northern Hemisphere midlatitude land, perhaps owing to the neglect of subgrid variations of large-scale ascents and inadequate convective sources. The prognostic scheme leads to a substantial improvement in the agreement of model-predicted present-day liquid water path (LWP) and cloud forcing with satellite measurements compared to using the empirical relationship. The simulations with preindustrial and present-day aerosols show that the combined first and second indirect effects of anthropogenic sulfate and organic aerosols give rise to a steady-state global annual mean flux change of −1.8 W m−2, consisting of −2.0 W m−2 in shortwave and 0.2 W m−2 in longwave. The ratios of the flux changes in the Northern Hemisphere (NH) to that in Southern Hemisphere (SH) and of the flux changes over ocean to that over land are 2.9 and 0.73, respectively. These estimates are consistent with the averages of values from previous studies stated in a recent review. The model response to higher Nd alters the cloud field; LWP and total cloud amount increase by 19% and 0.6%, respectively. Largely owing to high sulfate concentrations from fossil fuel burning, the NH midlatitude land and oceans experience strong radiative cooling. So does the tropical land, which is dominated by biomass burning–derived organic aerosol. The computed annual, zonal-mean flux changes are determined to be statistically significant, exceeding the model’s natural variations in the NH low and midlatitudes and in the SH low latitudes. This study reaffirms the major role of sulfate in providing CCN for cloud formation.

Infrared Temperature Control System for a Completely Noncontact Polymerase Chain Reaction in Microfluidic Chips

A completely noncontact temperature system is described for amplification of DNA via the polymerase chain reaction (PCR) in glass microfluidic chips. An infrared (IR)-sensitive pyrometer was calibrated against a thermocouple inserted into a 550-nL PCR chamber and used to monitor the temperature of the glass surface above the PCR chamber during heating and cooling induced by a tungsten lamp and convective air source, respectively. A time lag of less than 1 s was observed between maximum heating rates of the solution and surface, indicating that thermal equilibrium was attained rapidly. Moreover, the time lag was corroborated using a one-dimensional heat-transfer model, which provided insight into the characteristics of the device and environment that caused the time lag. This knowledge will, in turn, allow for future tailoring of the devices to specific applications. To alleviate the need for calibrating the pyrometer with a thermocouple, the on-chip calibration of pyrometer was accomplished by sensing the boiling of two solutions, water and an azeotrope, and comparing the pyrometer output voltage against the known boiling points of these solutions. The "boiling point calibration" was successful as indicated by the subsequent chip-based IR-PCR amplification of a 211-bp fragment of the B. anthracis genome in a chamber reduced beyond the dimensions of a thermocouple. To improve the heating rates, a parabolic gold mirror was positioned above the microfluidic chip, which expedited PCR amplification to 18.8 min for a 30-cycle, three-temperature protocol.

A three-phase flow model

We present here a three-fluid three-pressure model to describe three-field patterns or three-phase flows. The basic ideas rely on the counterpart of the two-fluid two-pressure model which has been introduced in the DDT (deflagration to detonation theory) framework, and has been more recently extended to liquid–vapour simulations. We first show that the system is hyperbolic without any constraining condition on the flow patterns. This is followed by a detailed investigation of the structure of single waves in the Riemann problem. Smooth solutions of the whole system are shown to be in agreement with physical requirements on void fractions, densities, and specific entropies. A simple fractional step method, which handles separately convective patterns and source terms, is used to compute approximations of solutions. A few computational results illustrate the whole approach.

Generation and Trapping of Gravity Waves from Convection with Comparison to Parameterization

Abstract Some parameterizations of gravity wave mean flow forcing in global circulation models (GCMs) add realism by describing wave generation by tropospheric convection. Because the convection in GCMs is itself a parameterized process, these convectively generated wave parameterizations necessarily use many simplifying assumptions. In this work, the authors use a realistic simulation of wave generation by convection described in previous work, which was validated by observations from the Darwin Area Wave Experiment (DAWEX), to test these assumptions and to suggest some possible improvements to the parameterizations. In particular, the authors find that wave trapping in the troposphere significantly modifies the spectrum of vertically propagating waves entering the stratosphere above convective wave sources, and offer a linear method for computing wave transmission and reflection effects on the spectrum suitable for inclusion in the parameterizations. The wave fluxes originate from both a time-varying heating mechanism and an obstacle effect mechanism acting in the simulation. Methods for including both mechanisms in the parameterizations are described. Waves emanating from the obstacle effect remain very sensitive to the depth of penetration of latent heating cells into an overlying shear zone, which will continue to make it difficult to accurately parameterize in a GCM where the convective cells are not resolved.