Contemporary Samples Research Articles

Updated status of Bayou darter, a narrowly ranged endemic in a geomorphically active watershed

Comparison of historical and current data are critical in establishing population trends for imperiled taxa. In this paper we revisit the status of the Bayou darterNothonotus rubrum, an endemic fish restricted to the Bayou Pierre river system, Mississippi, USA. The Bayou Pierre has experienced substantial geomorphic change in the past century, leading to questions about persistence of this imperiled species. We employed historical field notes and museum records to identify collection localities, and we resampled 32 of these localities using methodologies comparable to the original samples. We further sampled an additional 10 sites with similar methodologies to fill in spatial data gaps. Rates of capture and numbers of individuals were similar between historical and contemporary samples; however, collections with multiple individuals in contemporary samples were largely restricted to the upstream periphery of their historical distribution. Qualitative comparisons of numbers of individuals caught over several decades using variable methodology suggest that declines in abundances have happened since the species was first described. Bayou darter occupancy was positively related to stream link magnitude (beta estimate = 3.07), andN-mixture modeling estimated contemporary abundance at 7.36 ± 3.83 individuals per site. Bayou darter counts were negatively related to variance in kilometer-scale stream elevation (beta estimate = -0.60). Our results suggest that this species remains imperiled and is experiencing a declining range, and that continued efforts to study and monitor this species, and to reduce geomorphic change in the system, are merited.

Isparta-Eğirdir Sultan II. Gıyaseddin Keyhüsrev Kervansarayı Kazılarında Bulunan Temrenler

The number of studies on comparisons of technical features of arms in the sophisticated history of Medieval Ages is very limited. One of the reasons for this deficiency is the disregard of this topic in researches, and another reason is that the unclear information about the layers of archaeological finds. Such is the case for Medieval Anatolia as well. Excavation finds like knives, arrowheads and spearheads are not included in the interpretations of war history. Understanding the war technology of Crusaders, Seljuks and Mongols can only be possible by morphologic, archaeo-metallurgical and terminological examinations of the original excavation finds. In this study 64 arrowheads, which were revealed during the 1993, 2006 and 2007 excavations at Gıyaseddin Keyhusrev II Caravanserai, Isparta-Eğirdir, were discussed in morphologic, archaeo-metallurgical, and terminological perspectives. The finds were evaluated by their layer contexts, dimension, weight, morphology, terminology and typology features; they were classified in accordance with their figural features and compared with contemporary examples. Discussions and proposals were made about naming the types with proper technical terms which are mentioned in arrow treatises and warfare books related to the period. 8 of these arrowheads were examined by using archaeometric methods, their micro-structures and the others were determined by the use of Scanning Electron Microscope (SEM) and Energy Dispersive X-ray Spectrometry (EDS). Apart from the other published medieval arrowheads the samples subjected in this study are the first samples to be directly dated in light of the stratigraphic data collected from the layer contexts that were found in the excavation. Thus, the different types of arrowheads determined by this study are significant in means of the data collected from their technological features such as internal structure and hardness, for a comparative study with other contemporary samples, and building a data base on the technique data of Anatolian Seljuk arrowheads.

Analysis of 14C concentration in teeth to estimate the year of birth in the Mexican population

The 14C analysis of permanent teeth employing nuclear techniques has a direct application in Forensic Sciences since teeth are the hardest part of the human body and can survive natural decay or extreme conditions. After the first Accelerator Mass Spectrometry Laboratory AMS-LEMA at UNAM, our research group is interested in reproducing 14C analysis on teeth as other countries to estimate age in the Mexican population samples. One of the main goals of this exploratory study is to know the best methodology considering relevant biological factors based on differences in tissues (enamel and dentin) that allows us to know the year of birth through the 14C concentration comparing the yield between 14C analyses from carbonate in enamel and collagen in dentin. In this study, Accelerator Mass Spectrometry (AMS) has been performed in 22 contemporary teeth samples (each one donated from 1 different adult), participating 22 individuals by informed consent to enable a new tool and improve forensic practices in Mexico. Carbon is extracted, converted to graphite, and pressed into a cathode. The sample is taken to an AMS system, where carbon isotopes are separated, counted, and the 14C/12C and 13C/12C ratios determined. Our results for standards and teeth samples from Mexican people are in good agreement with the expected values; they are also useful to set up the best conditions for studies in dentin and enamel. However, this is a destructive technique for dental organs; it is not suitable for individuals born previous 1950. New challenges in sample preparation processes are to be solved to take advantage of the nuclear techniques developed in the last 50 years and make new contributions to society.

A case study on mineralogy and physico-mechanical properties of commercial bricks produced in Nepal

Uses of clay brick have practiced since ancient times in the Kathmandu valley of Nepal as structural materials for the construction of historical monuments, temples, and even modern buildings so on. However, their durability and sustainability properties are less studied scientifically in Nepal. Taking into consideration, analysis of mineralogical phases and physico-mechanical properties of modern clay bricks of Nepal was carried out using X-ray powder diffraction as well as Fourier transform infra-red techniques, and American Standards for Testing Materials standards, respectively. Quartz, feldspars, alumina-rich spinel, muscovite, primary mullite, and hematite are constituent in the bricks. Appearance of the spinel and primary mullite phases in burnt brick samples with diminishing feldspar peaks were to be different, indicating that the temperature applied for the making of these clay bricks presumed to be between 900 and 1050 °C. All the commercially used contemporary brick samples analyzed herein could be of II and III classes based on the estimated physical and mechanical properties. They showed the water absorption capacity (WAC), apparent porosity (PA), bulk density (DB), and compressive strength (SC) in the range of 5–30%, 10–40%, 1.1–2.15 g/cm3, and 3.35–10.53 MPa, respectively, and these properties have a reasonable correlation. The SC is to be decreased exponentially with increasing both the WAC and PA and increased exponentially with DB.

Microbiomes From Biorepositories? 16S rRNA Bacterial Amplicon Sequencing of Archived and Contemporary Intestinal Samples of Wild Mammals (Eulipotyphla: Soricidae)

Interest in gut microbial community composition has exploded recently as a result of the increasing ability to characterize these organisms and a growing understanding of their role in host fitness. New technologies, such as next generation amplicon (16S rRNA) sequencing, have enabled identification of bacterial communities from samples of diverse origin (e.g., fecal, skin, genital, environmental, etc.). Relatively little work, however, has explored the feasibility of utilizing historical samples (e.g., museum archived samples) of varying age, quality, and preservation type. Because natural history collections span multiple decades, these biorepositories have the potential to provide fundamental historical baselines to measure and better understand biodiversity on a changing planet. Utilizing even a small proportion of museum specimens could provide a means of sampling past microbial communities, allowing for direct comparison to contemporary communities and more complete understanding of dynamic shifts through time. We examined the feasibility of obtaining 16S rRNA amplicon microbiome data from whole gastrointestinal tracts (GIs) of shrews of varying age and preservation method, including 5 freshly collected shrew GIs immediately fixed in liquid nitrogen (LN2), 10 ten-year old shrew GIs frozen at -20°C (whole animal), and 10 shrews of varying ages (4 from 1968, 1 from 1980, 1 from 2001, 1 from 2004, 1 from 2007, 1 from 2011 and 2 from 2013) fixed and stored whole in 70% ethanol. Not surprisingly, results of 16S rDNA amplicon sequencing reveal significantly different bacterial communities between different preservation techniques and age of samples. Ten-year old frozen samples had bacterial communities most similar to freshly collected (LN2) samples, while the bacterial communities of both were significantly different from the 70% ethanol preserved samples of various ages. Amongst those preserved in 70% ethanol, age of samples also influenced bacterial community composition. Additionally, we compare results of OTU based and ASV based analyses. Looking ahead, field collectors and museums should develop and adopt best practices related to frozen preservation to ensure adequate material for future microbiome investigations.

Contemporary distribution of benthic foraminiferal assemblages in coastal wetlands of south-eastern Australia

Benthic foraminifera identified from the upper intertidal zone of coastal mangrove and saltmarsh wetlands of south-eastern Australia exhibit spatial zonation that varies with elevation and corresponds to position in the tidal frame. This study describes relationships between benthic foraminiferal assemblages and environmental variables, such as wetland elevation, pore-water salinity, substrate organic matter content and sediment grainsize. Agglutinated taxa dominated higher in the tidal frame, whereas calcareous taxa increased in both relative abundance and diversity lower in the tidal frame. Species composition varied within and between study sites, reflecting local differences in other environmental variables. Three major spatial clusters were identified in the upper intertidal zone from a dataset consisting of 111 contemporary samples: a high-to mid-elevation assemblage consisting of differing abundances of Entzia macrescens and Trochammina inflata; a mid-elevation assemblage comprised of Arenoparrella mexicana in association with Trochammina inflata and Quinqueloculina seminula; and mid-to low-elevation assemblage characterised by Cribroelphidium excavatum, Quinqueloculina seminula, Ammobaculites spp. and Miliammina fusca. Multivariate analysis correlated foraminiferal assemblages with environmental variables showing that foraminiferal distribution in the region is constrained primarily by wetland elevation, but also by pore-water salinity. Foraminiferal assemblages derived from cluster analysis correlated with vegetation zones, implying that both foraminifera and vegetation are influenced by elevation and salinity. This paper seeks to demonstrate that the consistency in spatial zonation of assemblages provides greater confidence that contemporary distribution of foraminiferal assemblages can assist with the interpretation of past depositional conditions and palaeo-environmental reconstructions, providing insights into the evolution of coastal wetlands of south-eastern Australia over the Holocene.

Diets of Longnose Sucker in Yellowstone Lake, Yellowstone National Park, USA

Invasive species introduction and expansion is the second greatest threat to global biodiversity decline after habitat degradation. Introduced in the 1930s, the benthivorous Longnose Sucker (Catostomus catostomus) became established in Yellowstone Lake, Wyoming, USA, and used tributary streams for spawning. With this introduction, concerns were raised regarding their possible competition for food resources with native adfluvial Yellowstone Cutthroat Trout (Oncorhynchus clarkii bouvieri). Additionally, insufficient literature exists on Longnose Sucker feeding habits throughout their range, and there has been no comprehensive study of Longnose Sucker diet in Yellowstone Lake. The need exists for understanding the community ecology and food web dynamics in Yellowstone Lake, especially as non-native Lake Trout (Salvelinus namaycush) have caused declines in Yellowstone Cutthroat Trout through predation. The objectives of this study were to examine possible size-specific shifts in feeding habits, evaluate feeding strategy, and compare historical and contemporary diet data of Longnose Suckers in Yellowstone Lake. Diet data collected during summer of 2018 were analyzed by length-class to test for size-specific diet shifts. As Longnose Sucker length increased, copepods (Diacyclops bicuspidatus thomasi, Leptodiaptomus ashlandi or Hesperodiaptomus shoshone) decreased in proportion by weight. In contrast, dipterans (Chironomidae) and amphipods (Hyalella spp. or Gammarus spp.) varied in proportion by weight in the diet across length classes. We assessed the feeding strategy by evaluating the relationship between prey-specific abundance and percent frequency of occurrence. This assessment indicates that Longnose Suckers have a heterogeneous diet and generalized feeding strategy as all prey items had a prey-specific abundance value of <50%. Diet composition differed significantly between historical and contemporary samples, likely related to the differences in sampling locations and possibly due to a Lake Trout-induced trophic cascade. This study established the diet composition and feeding habits of Longnose Suckers residing in Yellowstone Lake, thus, expanding our knowledge of Longnose Sucker feeding patterns and ecology.

Understanding the transfer of contemporary temperature signals into lake sediments via paired oxygen isotope ratios in carbonates and diatom silica: Problems and potential

Although the oxygen isotope composition (δ18O) of calcite (δ18Ocalcite) and, to a lesser extent, diatom silica (δ18Odiatom) are widely used tracers of past hydroclimates (especially temperature and surface water hydrology), the degree to which these two hosts simultaneously acquire their isotope signals in modern lacustrine environments, or how these are altered during initial sedimentation, is poorly understood. Here, we present a unique dataset from a natural limnological laboratory to explore these issues. This study compares oxygen and hydrogen isotope data (δ18O, δ2H) of contemporary lake water samples at ~2-weekly intervals over a 2-year period (2010–12) with matching collections of diatoms (δ18Odiatom) and calcite (δ18Ocalcite) from sediment traps (at 10 m and 25 m) at Rostherne Mere (maximum depth 30 m), a well-monitored, eutrophic, seasonally stratified monomictic lake in the UK. The epilimnion shows a seasonal pattern of rising temperature and summer evaporative enrichment in 18O, and while there is a temperature imprint in both δ18Odiatom and δ18Ocalcite, there is significant inter-annual variability in both of these signals. The interpretation of δ18Odiatom and δ18Ocalcite values is complicated due to in-lake processes (e.g. non-equilibrium calcite precipitation, especially in spring, leading to significant 18Ocalcite depletion), and for δ18Odiatom, by post-mortem, depositional and possibly dissolution or diagenetic effects. For 2010 and 2011 respectively, there is a strong temperature dependence of δ18Ocalcite and δ18Odiatom in fresh trap material, with the fractionation slope for δ18Odiatom of ca. −0.2‰/°C, in agreement with several other studies. The δ18Odiatom data indicate the initiation of rapid post-mortem secondary alteration of fresh diatom silica (within ~6 months), with some trap material undergoing partial maturation in situ. Diatom δ18O of the trap material is also influenced by resuspension of diatom frustules from surface sediments (notably in summer 2011), with the net effect seen as an enrichment of deep-trap 18Odiatom by about +0.7‰ relative to shallow-trap values. Contact with anoxic water and anaerobic bacteria are potentially key to initiating this silica maturation process, as deep-trap samples that were removed prior to anoxia developing do not show enrichment. Dissolution (perhaps enhanced by anaerobic bacterial communities) may also be responsible for changes to δ18Odiatom that lead to increasing, but potentially predictable, error in inferred temperatures using this proxy. High resolution, multi-year monitoring can shed light on the complex dynamics affecting δ18Odiatom and δ18Ocalcite and supports the careful use of sedimentary δ18Odiatom and δ18Ocalcite as containing valuable hydroclimatic signals especially at a multi-annual resolution, although there remain substantial challenges to developing a reliable geothermometer on paired δ18Odiatom and δ18Ocalcite. In particular, δ18Odiatom needs cautious interpretation where silica post-mortem secondary alteration is incomplete and diatom preservation is not perfect, and we recommend dissolution be routinely assessed on diatom samples used for isotopic analyses.

Size reductions and genomic changes within two generations in wild walleye populations: associated with harvest?

The extent and rate of harvest‐induced genetic changes in natural populations may impact population productivity, recovery, and persistence. While there is substantial evidence for phenotypic changes in harvested fishes, knowledge of genetic change in the wild remains limited, as phenotypic and genetic data are seldom considered in tandem, and the number of generations needed for genetic changes to occur is not well understood. We quantified changes in size‐at‐age, sex‐specific changes in body size, and genomic metrics in three harvested walleye (Sander vitreus) populations and a fourth reference population with low harvest levels over a 15‐year period in Mistassini Lake, Quebec. We also collected Indigenous knowledge (IK) surrounding concerns about these populations over time. Using ~9,000 SNPs, genomic metrics included changes in population structure, neutral genomic diversity, effective population size, and signatures of selection. Indigenous knowledge revealed overall reductions in body size and number of fish caught. Smaller body size, a small reduction in size‐at‐age, nascent changes to population structure (population differentiation within one river and homogenization between two others), and signatures of selection between historical and contemporary samples reflected coupled phenotypic and genomic change in the three harvested populations in both sexes, while no change occurred in the reference population. Sex‐specific analyses revealed differences in both body size and genomic metrics but were inconclusive about whether one sex was disproportionately affected. Although alternative explanations cannot be ruled out, our collective results are consistent with the hypothesis that genetic changes associated with harvesting may arise within 1–2.5 generations in long‐lived wild fishes. This study thus demonstrates the need to investigate concerns about harvest‐induced evolution quickly once they have been raised.

Status of Hornyhead Chub (Nocomis biguttatus) and Redspot Chub (Nocomis asper) in Kansas

The Hornyhead Chub (Nocomis biguttatus) and Redspot Chub (Nocomis asper) are threatened species in Kansas, with population declines attributed largely to agriculture and impoundments. Both species are ecosystem engineers via their reproductive behavior, as they create and guard spawning mounds which other fishes use for spawning habitat. As such, declines of Kansas Nocomis have multi-species conservation implications. The objective of our research was to determine the current population status of Kansas Nocomis, which we accomplished by compiling known collection records, examining trends in those collection records, and by conducting our own contemporary sampling effort for Nocomis during 2017-2018. We found 112 unique collection records in Kansas for the Hornyhead Chub spanning from 1885-2014. Forty of the 112 records (36%) occurred since 1990, with only one since 2010 (<1%). All Hornyhead Chub collections since 1953 have come from the Osage River basin, with the most numerous and recent collections occurring in Elm Creek (WB and LY counties), Locust Creek (WB county), Marmaton River (BB county), North Wea Creek (MI county), and South Fork Pottawatomie Creek (AN county). Our 2017-2018 survey captured 111 Hornyhead Chubs at seven of 22 (32%) sample sites. For the Redspot Chub we found 59 unique collection records, with 34% of those collections happening since 1990, and none since 2007. All collections since 1963 were from Spring River or Shoal Creek in Cherokee county, although Redspot Chub had not been found in the Spring River since 1995. We captured four Redspot Chubs during 2017-2018, all in Shoal Creek. Our research indicated that the continued persistence of Nocomis in Kansas is in a precarious state, although the situation is much more perilous for the Redspot Chub than the Hornyhead Chub. Watershed protection and restoration coupled with propagation and repatriation may help prevent the extirpation of Nocomis species from Kansas.

A tale of textiles: Genetic characterization of historical paper mulberry barkcloth from Oceania.

Humans introduced paper mulberry (Broussonetia papyrifera) from Taiwan into the Pacific over 5000 years ago as a fiber source to make barkcloth textiles that were, and still are, important cultural artifacts throughout the Pacific. We have used B. papyrifera, a species closely associated to humans, as a proxy to understand the human settlement of the Pacific Islands. We report the first genetic analysis of paper mulberry textiles from historical and archaeological contexts (200 to 50 years before present) and compare our results with genetic data obtained from contemporary and herbarium paper mulberry samples. Following stringent ancient DNA protocols, we extracted DNA from 13 barkcloth textiles. We confirmed that the fiber source is paper mulberry in nine of the 13 textiles studied using the nuclear ITS-1 marker and by statistical estimates. We detected high genetic diversity in historical Pacific paper mulberry barkcloth with a set of ten microsatellites, showing new alleles and specific genetic patterns. These genetic signatures allow tracing connections to plants from the Asian homeland, Near and Remote Oceania, establishing links not observed previously (using the same genetic tools) in extant plants or herbaria samples. These results show that historic barkcloth textiles are cultural materials amenable to genetic analysis to reveal human history and that these artifacts may harbor evidence of greater genetic diversity in Pacific B. papyrifera in the past.

Hybridization ddRAD-sequencing for population genomics of nonmodel plants using highly degraded historical specimen DNA.

Species' responses at the genetic level are key to understanding the long-term consequences of anthropogenic global change. Herbaria document such responses, and, with contemporary sampling, provide high-resolution time-series of plant evolutionary change. Characterizing genetic diversity is straightforward for model species with small genomes and a reference sequence. For nonmodel species-with small or large genomes-diversity is traditionally assessed using restriction-enzyme-based sequencing. However, age-related DNA damage and fragmentation preclude the use of this approach for ancient herbarium DNA. Here, we combine reduced-representation sequencing and hybridization-capture to overcome this challenge and efficiently compare contemporary and historical specimens. Specifically, we describe how homemade DNA baits can be produced from reduced-representation libraries of fresh samples, and used to efficiently enrich historical libraries for the same fraction of the genome to produce compatible sets of sequence data from both types of material. Applying this approach to both Arabidopsis thaliana and the nonmodel plant Cardamine bulbifera, we discovered polymorphisms de novo in an unbiased, reference-free manner. We show that the recovered genetic variation recapitulates known genetic diversity in A. thaliana, and recovers geographical origin in both species and over time, independent of bait diversity. Hence, our method enables fast, cost-efficient, large-scale integration of contemporary and historical specimens for assessment of genome-wide genetic trends over time, independent of genome size and presence of a reference genome.

Temporal and structural genetic variation in reindeer (Rangifer tarandus) associated with the pastoral transition in Northwestern Siberia.

Just as the domestication of livestock is often cited as a key element in the Neolithic transition to settled, the emergence of large‐scaled reindeer husbandry was a fundamental social transformation for the indigenous peoples of Arctic Eurasia. To better understand the history of reindeer domestication, and the genetic processes associated with the pastoral transition in the Eurasian Arctic, we analyzed archaeological and contemporary reindeer samples from Northwestern Siberia. The material represents Rangifer genealogies spanning from 15,000 years ago to the 18th century, as well as modern samples from the wild Taĭmyr population and from domestic herds managed by Nenetses. The wild and the domestic population are the largest populations of their kind in Northern Eurasia, and some Nenetses hold their domestic reindeer beside their wild cousins. Our analyses of 197 modern and 223 ancient mitochondrial DNA sequences revealed two genetic clusters, which are interpreted as representing the gene pools of contemporary domestic and past wild reindeer. Among a total of 137 different mitochondrial haplotypes identified in both the modern and archaeological samples, only 21 were detected in the modern domestic gene pool, while 11 of these were absent from the wild gene pool. The significant temporal genetic shift that we associate with the pastoral transition suggests that the emergence and spread of reindeer pastoralism in Northwestern Siberia originated with the translocation and subsequent selective breeding of a special type of animal from outside the region. The distinct and persistent domestic characteristics of the haplotype structure since the 18th century suggests little genetic exchange since then. The absence of the typical domestic clade in modern nearby wild populations suggests that the contemporary Nenets domestic breed feature an ancestry from outside its present main distribution, possibly from further South.

Biological archives reveal contrasting patterns in trace element concentrations in pelagic seabird feathers over more than a century

Contamination of diverse environments and wild species by some contaminants is projected to continue and increase in coming decades. In the marine environment, large volumes of data to assess how concentrations have changed over time can be gathered from indicator species such as seabirds, including through sampling feathers from archival collections and museums. As apex predators, Flesh-footed Shearwaters (Ardenna carneipes) are subject to high concentrations of bioaccumulative and biomagnifying contaminants, and reflect the health of their local marine environment. We analysed Flesh-footed Shearwater feathers from Australia from museum specimens and live birds collected between 1900 and 2011 and assessed temporal trends in three trace elements of toxicological concern: cadmium, mercury, and lead. Concentrations of cadmium increased by 1.5% per year (95% CI: +0.6, +3.0), while mercury was unchanged through the time series (−0.3% per year; 05% CI: -2.1, +1.5), and lead decreased markedly (−2.1% per year, 95% CI: -3.2, −1.0). A reduction in birds’ trophic position through the 20th century, and decreased atmospheric emissions were the likely driving factors for mercury and lead, respectively. By combining archival material from museum specimens with contemporary samples, we have been able to further elucidate the potential threats posed to these apex predators by metal contamination.

Cervical ribs in human early life: morphological variability and first identification as a morbidity criterion in a past population.

Despite the medical literature on supernumerary cervical ribs in extant adult samples, little is known about their development and occurrence in early infancy. The documentation of cervical ribs in modern samples of fetuses and neonates is indeed affected by ethical as well as technical limitations. The aim of the present study was to investigate their frequencies and morphological variability in the first known archaeological collection of very young children with this anatomical variant. The study sample comes from the 8B-51 necropolis on the Saï island (Sudan) and dates to the Classic Kerma Period (XVIIIe-XVIe centuries BC). It consists of 64 individuals deceased between 24weeks of amenorrhoea and 2years of age. Bilateral or unilateral cervical ribs were found in 27 individuals. A total of 43 cervical ribs were identified, 38 of which are fully preserved. According to these observations, at least 42% of the individuals have unilateral or bilateral cervical ribs, with an average maximum length of < 1 cm. This frequency is very high compared to those observed in contemporary adult samples (up to 3%). First, the comparison of our results with biological and genetic research demonstrating the link between the occurrence of cervical ribs and a reduced chance of survival during infancy allows the first identification of this trait as an indicator of morbidity in an archaeological collection, a morbidity to which a genetic homogeneity or even endogamy could contribute. Second, the number of ribs studied makes it possible to propose a morphological classification based on the general shape and the shape of the articular facets, classification that can be used tos refine the analyses of the trait in future samples.

Temperature is a common climatic descriptor of lachryphagous activity period in Phortica variegata (Diptera: Drosophilidae) from multiple geographical locations

BackgroundThe drosophilid Phortica variegata is known as vector of Thelazia callipaeda, the oriental eyeworm native to Asia that has become an emergent zoonotic agent in several European regions. Unlike almost all other arthropod vectors of pathogens, only P. variegata males feed of lachrymal secretions of animals, ingesting first-stage larvae (L1) of the worm living in the orbital cavities of the host, and allowing with the same behaviour the introduction of infective L3. Despite the increased detection of T. callipaeda in many European countries, information about the length of the lachryphagous activity period of P. variegata and a deep knowledge of the environmental and climatic variables involved are still limited.MethodsWe herein present the results of a multicentre study involving five sites from four different countries (Italy, Spain, UK and USA) where canine thelaziosis is endemic and/or where it has already been ascertained the presence of P. variegata. Field data have been obtained on a fortnightly basis from mid-April to the end of November 2018 from a contemporary standardized sampling (same sampling effort and time of collection in all sites) of lachryphagous flies collected around the eyes of a human bait using an entomological net. These data have been associated to data collection of local climatic variables (day length, temperature, wind speed, barometric pressure and relative humidity).ResultsOverall, a total of 4862 P. variegata flies (4637 males and 224 females) were collected, with high differences in densities among the different sampling sites. Significant positive correlations were found between P. variegata male density and temperature and wind speed, while negative correlations were observed for barometric pressure and relative humidity. However, the above significant differences are confirmed in each sampling site separately only for the temperature.ConclusionsThis multicentre study highlights that temperature is the major common environmental driver in describing the lachryphagous activity of P. variegata in Europe and USA and, therefore, the transmission risk of thelaziosis.

Chemical profiling and cytotoxic activity of 150-year old original sample of Jerusalem Balsam

Herbal formulations have been used in ethnomedicine and pharmacy around the world for thousands of years. One of them is Jerusalem Balsam (JB), which came into use in the seventeenth century. Today, people still produce and use it regularly as prophylactic supplement.JB has been widely used in Europe since the nineteenth century, as a remedy possessing antibacterial, antifungal and anti-inflammatory activities. The composition of the product was not known, although possible formulations were reported. In this study the original sample, which dated back to 1870, was investigated for chemical composition and cytotoxic activity. The obtained results were compared with results from more recently produced samples. Several tests were carried out, namely GC-MS, UPLC-PDA-Q-TOF-MS and MTT.Only the 150-year old sample showed a significant cytotoxic activity on cancer cell lines. At a concentration of 125 μg/mL after 72 h of incubation, the original sample inhibited almost 90% of cell metabolic activity, while contemporary samples showed none or little activity. None of the tested samples showed a significant impact on normal cells. These results may be attributed to the activities of benzoic acid and its derivatives, cinnamic acid derivatives, vanillin, group of sesquiterpenes and cembrene.

The wellbeing of working-age adults with and without disability in the UK: Associations with age, gender, ethnicity, partnership status, educational attainment and employment status

BackgroundFew population-based studies have examined the association between disability and personal wellbeing (PWB) among working-age adults.Objective/Hypothesis: To determine: (1) the magnitude of differences in wellbeing between working-age adults with and without disability in contemporary samples representative of the UK population; and (2) whether the size of any observed differences between people with and without disability is moderated by age, gender, ethnicity, partnership status, educational attainment or employment status. MethodsSecondary analysis of data from three national cross-sectional surveys. ResultsIn each survey, people with disability scored lower than people without disability on all four indicators of PWB. Adjusting for the main effects of potentially moderating variables reduced the effect size of disability on PWB by an average of 24%. Subsequently adjusting for the two-way interaction terms between disability and potentially moderating variables reduced the effect size of disability (main effect) on PWB by an additional average of 73%. PWB among people with disability was significantly lower for: (1) men; (2) younger people; (3) those who belong to the majority ethnic group (white British); (4) those without a partner; and (5) people with lower socio-economic position. ConclusionsOur findings indicate that demographic characteristics and exposure to specific social determinants of poor health play a major role in the negative association between disability and personal wellbeing. A more sophisticated understanding of how social determinants interact to produce inequities associated with identities such as disability, gender, race, sexuality, and class (intersectionality) can inform effective policy interventions.

Long-term stocking practices threaten the original genetic diversity of the southernmost European populations of Atlantic salmon Salmo salar

Many Atlantic salmonSalmo salarpopulations in Europe are threatened by previous stocking with foreign hatchery strains. Temporal patterns of genetic characteristics of salmon from northern Spain, the southernmost European populations, were compared before and after species decline and heavy stocking with specimens from northern Europe. Eleven microsatellite loci were analysed in archival (scales from 1958-1960) and contemporary (2007-2008) samples from the River Sella. Temporal analyses revealed a similar heterozygosity between archival and contemporary samples, despite a drastic decrease in population abundance, while the contemporary sample showed a higher allelic richness due to the occurrence of foreign alleles. Considering only the alleles with at least 4% frequency in the archival sample, 2 alleles exclusive to the River Sella were absent in the contemporary sample, and 14 alleles showed a decrease of at least 4% frequency. Four alleles common in Scotland showed a high occurrence in the contemporary sample, so they are good candidates as markers of introgression of foreign genes. The heavy stocking with non-native Scottish broodstocks between 1970 and 1990 caused the introgression found in the contemporary sample when compared with the pristine population. An abrupt decrease was evident when the estimates of effective number of breeders were adjusted to take into account overlapping generations (NbAdj), effective population size (NeAdj) estimated fromNbAdj, and number of breeders estimated using the sibship assignment method (NbSIB). The very low effective size values found in the contemporary sample, together with the detrimental synergy between genetic drift and high rates of introgression, represent a severe risk for the conservation of native salmon.

A new model for efficient, need-driven progress in generating primary biodiversity information resources.

PremiseThe field of biodiversity informatics has developed rapidly in recent years, with broad availability of large‐scale information resources. However, online biodiversity information is biased spatially as a result of slow and uneven capture and digitization of existing data resources. The West African Plants Initiative approach to data capture is a prototype of a novel solution to the problems of the traditional model, in which the institutional “owner” of the specimens is responsible for digital capture of associated data.MethodsWe developed customized workflows for data capture in formats directly and permanently useful to the “owner” herbarium, and digitized significant numbers of new biodiversity records, adding to the information available for the plants of the region.ResultsIn all, 190,953 records of species in 1965 genera and 331 families were captured by mid‐2018. These data records covered 16 West African countries, with most of the records (10,000–99,999) from Côte d'Ivoire, Ghana, Togo, Nigeria, and Cameroon, and the fewest data records from Mauritania (<100 records). The West African Plants Initiative has increased available digital accessible knowledge records for West African plants by about 54%. Several of the project institutions have put initial project data online as part of their Global Biodiversity Information Facility data contributions. The average cost of data capture ranged from US$0.50−1.00 per herbarium sheet.DiscussionData capture has been cost‐effective because it is much less expensive than de novo field collections, allows for development of information resources even for regions in which political situations make contemporary field sampling impossible, and provides a historical baseline against which to compare newer data as they become available. This new paradigm in specimen digitization has considerable promise to accelerate and improve the process of generating high‐quality biodiversity information, and can be replicated and applied in many biodiversity‐rich, information‐poor regions to remedy the present massive gaps in information availability.