Polymer Conformation Research Articles

Aqueous Polyelectrolyte Electrodeposition: The Effects of Alkyl Substitution and Varying Supporting Electrolyte Concentrations on the Deposition Efficiency

AbstractThe controlled growth of surface‐modifying polymer films by electrodeposition often fails because of the lack of redox activity of these compounds. Here, electroactive complexants help to electrodeposit non‐electroactive polymers. Hence, we investigate the counterion‐induced electrodeposition of polyelectrolytes: three quaternized poly(N,N‐dialkylaminoethyl methacrylate)s (qPDAAEMA), in particular their methyl, ethyl, and isopropyl derivatives (i. e. qPDMAEMA, qPDEAEMA, and qPDPAEMA), provide transparent solutions in the presence of hexacyanoferrate(II) (ferrocyanide) at specific concentration windows of the KCl supporting electrolyte. Below a certain KCl concentration, insolubility dominates irrespective of the hexacyanoferrate valency, whilst above an upper threshold, full solubility is observed. Between these limits, oxidation reversibly electrodeposits polymer/hexacyanoferrate(III) (ferricyanide) complexes. Hydrodynamic voltammetry (and data analysis using in‐house software) provides access to the deposition efficiency (DE). qPDEAEMA with ethyl substituents shows highest DEs; larger or smaller substituents fall short because of a balance between “hydrophobicity” and charge separation, shifting the window toward smaller salt concentrations with increasing alkyl size. We always observe a DE maximum close to the minimum salt concentration, whilst electrochemical quartz crystal microbalance (EQCM) measurements indicate a change in film water content close to the maximum. These effects, being also discussed in terms of polymer conformation, can direct the future engineering of electroassisted coatings.

Protein-Inspired Control over Synthetic Polymer Folding for Structured Functional Nanoparticles in Water.

The folding of proteins into functional nanoparticles with defined 3D structures has inspired chemists to create simple synthetic systems mimicking protein properties. The folding of polymers into nanoparticles in water proceeds via different strategies, resulting in the global compaction of the polymer chain. Herein, we review the different methods available to control the conformation of synthetic polymers and collapse/fold them into structured, functional nanoparticles, such as hydrophobic collapse, supramolecular self-assembly, and covalent cross-linking. A comparison is made between the design principles of protein folding to synthetic polymer folding and the formation of structured nanocompartments in water, highlighting similarities and differences in design and function. We also focus on the importance of structure for functional stability and diverse applications in complex media and cellular environments.

Hierarchical Model of Weak Polyelectrolytes with Ionization and Conformation Consistency

Conventional models of weak polyelectrolytes are formulated in terms of either an average degree of ionization or a rigid polymer conformation. While the decoupling of segment-level ionization and polymer structure simplifies the theoretical procedure and is beneficial from a computational perspective, it misses intrachain correlations (i.e., interactions beyond adjacent monomers) that are important for systems at a low polymer concentration with strong electrostatic interactions. In this work, we propose a hierarchical method that incorporates the liquid-state theories with the site-binding model to account for the effects of the local ionic environment on both inter- and intrachain correlations. A wormlike-chain model is introduced to describe the coupling of polymer conformation and monomeric ionization with the long-range electrostatic interactions accounted for by using the Gibbs–Bogoliubov variational principle. Through an extensive comparison of the theoretical predictions with experimental titration curves for poly(acrylic acid) in different alkali chloride solutions, we demonstrate that the hierarchical model is able to quantify the charging behavior of weak polyelectrolytes over a broad range of solution conditions.

Universality in conformations and transverse fluctuations of a semi-flexible polymer in a crowded environment.

We study the universal aspects of polymer conformations and transverse fluctuations for a single swollen chain characterized by a contour length L and a persistence length ℓp in two dimensions (2D) and three dimensions (3D) in the bulk, as well as in the presence of excluded volume (EV) particles of different sizes occupying different area/volume fractions. In the absence of the EV particles, we extend the previously established universal scaling relations in 2D [Huang et al., J. Chem. 140, 214902 (2014)] to include 3D and demonstrate that the scaled end-to-end distance ⟨RN2⟩/(2Lℓp) and the scaled transverse fluctuation ⟨l⊥2⟩/L as a function of L/ℓp collapse onto the same master curve, where ⟨RN2⟩ and ⟨l⊥2⟩ are the mean-square end-to-end distance and transverse fluctuations. However, unlike in 2D, where the Gaussian regime is absent due to the extreme dominance of the EV interaction, we find that the Gaussian regime is present, albeit very narrow in 3D. The scaled transverse fluctuation in the limit L/ℓp ≪ 1 is independent of the physical dimension and scales as ⟨l⊥2⟩/L∼(L/ℓp)ζ-1, where ζ = 1.5 is the roughening exponent. For L/ℓp ≫ 1, the scaled fluctuation scales as ⟨l⊥2⟩/L∼(L/ℓp)ν-1, where ν is the Flory exponent for the corresponding spatial dimension (ν2D = 0.75 and ν3D = 0.58). When EV particles of different sizes for different area or volume fractions are added into 2D and 3D systems, our results indicate that the crowding density either does not or does only weakly affect the universal scaling relations. We discuss the implications of these results in living matter by showing the experimental result for a dsDNA on the master plot.

Globular Proteins and Where to Find Them within a Polymer Brush-A Case Study.

Protein adsorption by polymerized surfaces is an interdisciplinary topic that has been approached in many ways, leading to a plethora of theoretical, numerical and experimental insight. There is a wide variety of models trying to accurately capture the essence of adsorption and its effect on the conformations of proteins and polymers. However, atomistic simulations are case-specific and computationally demanding. Here, we explore universal aspects of the dynamics of protein adsorption through a coarse-grained (CG) model, that allows us to explore the effects of various design parameters. To this end, we adopt the hydrophobic-polar (HP) model for proteins, place them uniformly at the upper bound of a CG polymer brush whose multibead-spring chains are tethered to a solid implicit wall. We find that the most crucial factor affecting the adsorption efficiency appears to be the polymer grafting density, while the size of the protein and its hydrophobicity ratio come also into play. We discuss the roles of ligands and attractive tethering surfaces to the primary adsorption as well as secondary and ternary adsorption in the presence of attractive (towards the hydrophilic part of the protein) beads along varying spots of the backbone of the polymer chains. The percentage and rate of adsorption, density profiles and the shapes of the proteins, alongside with the respective potential of mean force are recorded to compare the various scenarios during protein adsorption.

Prediction of Electronic Properties of Radical-Containing Polymers at Coarse-Grained Resolutions

The properties of soft electronic materials depend on the coupling of electronic and conformational degrees of freedom over a wide range of spatiotemporal scales. The description of such properties requires multiscale approaches capable of, at the same time, accessing electronic properties and sampling the conformational space of soft materials. This could in principle be realized by connecting the coarse-grained (CG) methodologies required for adequate conformational sampling to conformationally averaged electronic property distributions via backmapping to atomistic-resolution level models and repeated quantum-chemical calculations. Computational demands of such approaches, however, have hindered their application in high-throughput computer-aided soft materials discovery. Here, we present a method that, combining machine learning and CG techniques, can replace traditional backmapping-based approaches without sacrificing accuracy. We illustrate the method for an emerging class of soft electronic materials, namely, nonconjugated, radical-containing polymers, promising materials for all-organic energy storage. Supervised machine learning models are trained to learn the dependence of electronic properties on polymer conformation at CG resolutions. We then parametrize CG models that retain electronic structure information, simulate CG condensed phases, and predict the electronic properties of such phases solely from the CG degrees of freedom. We validate our method by comparing it against a full backmapping-based approach and find good agreement between both methods. This work demonstrates the potential of the proposed method to accelerate multiscale workflows and provides a framework for the development of CG models that retain electronic structure information.

Research progress of intrinsic polymer dielectrics with high thermal conductivity

AbstractHeat dissipation has become an important challenge and technical bottleneck for the rapid development of high‐frequency microelectronic devices and high‐voltage electrical equipment. Thus, there is a great urgent need for high‐performance intrinsically thermally conductive polymer (ITCP) to realise effective heat dissipation. In recent year, the ITCP has received extensive attention due to excellent overall performances and clear advantages over conventional heat conductive polymer composites. The thermal transport physics and its relation with the multiscale chain conformations in polymers with diverse morphologies are reviewed. Then, the current understanding of how the chemistry of polymers, multiscale chain morphologies and conformations would affect phonon transport and the resulting thermal conductivity (TC) in both amorphous and crystalline polymers to unveil the important chemistry‐structure‐property relationships is discussed and anaysed. The latest advances in engineering ITCP from oriented fibre to bulk amorphous states for a high TC are summarised. Lastly, the challenges, prospects and outlook of ITCP have been proposed. The authors anticipate that the present paper will spire more fundamental and applied research in the intrinsic polymer dielectrics field to advance scientific understanding and industrial applications.

Toward Memory in a DNA Brush: Site-Specific Recombination Responsive to Polymer Density, Orientation, and Conformation.

Site-specific recombination is a cellular process for the integration, inversion, and excision of DNA segments that could be tailored for memory transactions in artificial cells. Here, we demonstrate the compartmentalization of cascaded gene expression reactions in a DNA brush, starting from the cell-free synthesis of a unidirectional recombinase that exchanges information between two DNA molecules, leading to gene expression turn-on/turn-off. We show that recombination yield in the DNA brush was responsive to gene composition, density, and orientation, with kinetics faster than in a homogeneous dilute bulk solution reaction. Recombination yield scaled with a power law greater than 1 with respect to the fraction of recombining DNA polymers in a dense brush. The exponent approached either 1 or 2, depending on the intermolecular distance in the brush and the position of the recombination site along the DNA contour length, suggesting that a restricted-reach effect between the recombination sites governs the recombination yield. We further demonstrate the ability to encode the DNA recombinase in the same DNA brush with its substrate constructs, enabling multiple spatially resolved orthogonal recombination transactions within a common reaction volume. Our results highlight the DNA brush as a favorable compartment to study DNA recombination, with unique properties for encoding autonomous memory transactions in DNA-based artificial cells.

Tuning the Thermometric Features in 1D Luminescent EuIII and TbIII Coordination Polymers through Different Bridge Phosphine Oxide Ligands.

TbIII and EuIII systems have been investigated as ratiometric luminescent temperature probes in luminescent coordination polymers due to TbIII → EuIII energy transfer (ET). To help understand how ion-ion separation, chain conformation as well as excitation channel impact their thermometric properties, herein, [Eu(tfaa)3(μ-L)Tb(tfaa)3]n one-dimensional (1D) coordination polymers (tfaa- = trifluoroacetylacetonate, and L = [(diphenylphosphoryl)R](diphenyl)phosphine oxide, R = ethyl - dppeo - or butyl - dppbo) were synthesized. The short μ-dppeo bridge ligand leads to a more linear 1D polymeric chain, while the longer μ-dppbo bridge leads to tighter packed chains. As the temperature rises from 80 K, upon direct TbIII excitation at 488 nm, the TbIII emission intensity decreases, while the EuIII emission intensity increases after 160 and 200 K when L = dppeo or dppbo, respectively. The temperature-dependent emission intensities, due to TbIII → EuIII ET, enable the development of ratiometric luminescent temperature probes featuring maximum relative thermal sensitivity up to 3.8% K-1 (250 K, L = dppbo, excitation at 488 nm). On the other hand, the same system displays maximum thermal sensitivity up to 3.5% K-1 (323 K) upon ligand excitation at 300 nm. Thus, by changing the excitation channel and bridge ligand that leads to modification of the polymer conformations, the maximum relative thermal sensitivity can be tuned.

Fast-release kinetics of a pH-responsive polymer detected by dynamic contact angles.

Polymers conjugated with active agents have applications in biomedicine, anticorrosion, and smart agriculture. When the active agent is used as a drug, corrosion inhibitor, or pesticide, it can be released upon a specific stimulus. The efficiency and the sustainability of active agents are determined by the released kinetics. In this work, we study the fast-release kinetics of 8-hydroxyquinoline (8HQ) from a pH-responsive, random copolymer of methyl methacrylate and 8-quinolinyl-sulfide-ethyl acrylate [P(MMA-co-HQSEA)] by hydrolysis of the β-thiopropionate groups. We used contact angle measurements of sliding drops as an elegant way to characterize the release kinetics. Based on the results gained from 1H nuclear magnetic resonance measurement, fluorescent intensity measurement, and velocity-dependent contact angle measurement, we found that both the hydrolysis rate and polymer conformation affect the release kinetics of 8HQ from a P(MMA-co-HQSEA) film. Polymer chains collapse and further suppress the release from the inner layer in acidic conditions, while polymer chains in a stretched condition further facilitate the release from the inner layer. As a result, the cumulative release rate of 8HQ is higher in the basic condition than in the acidic condition.

Scalable Fabrication of Reversible Antifouling Block Copolymer Coatings via Adsorption Strategies.

Fouling remains a widespread challenge as its nonspecific and uncontrollable character limits the performance of materials and devices in numerous applications. Although many promising antifouling coatings have been developed to reduce or even prevent this undesirable adhesion process, most of them suffer from serious limitations, specifically in scalability. Whereas scalability can be particularly problematic for covalently bound antifouling polymer coatings, replacement by physisorbed systems remains complicated as it often results in less effective, low-density films. In this work, we introduce a two-step adsorption strategy to fabricate high-density block copolymer-based antifouling coatings on hydrophobic surfaces, which exhibit superior properties compared to one-step adsorbed coatings. The obtained hybrid coating manages to effectively suppress the attachment of both lysozyme and bovine serum albumin, which can be explained by its dense and homogeneous surface structure as well as the desired polymer conformation. In addition, the intrinsic reversibility of the adhered complex coacervate core micelles allows for the successful triggered release and regeneration of the hybrid coating, resulting in full recovery of its antifouling properties. The simplicity and reversibility make this a unique and promising antifouling strategy for large-scale underwater applications.

Molecular dynamics simulation of the lubricant conformation changes and energy transfer of the confined thin lubricant film

The lubrication system plays an important role in the reliability of moving links for spacecrafts while lubrication failure has emerged as one of the challenges in developing advanced spacecrafts with long life and high reliability. However, the process and mechanism of lubrication in space are still unclear due to a complex environment. In this study, the lubrication behavior under various pressure loads was studied by analyzing the lubricant conformation changes and energy transfer through molecular dynamics simulations. Results indicated that a “one-step” or “two-step” adjustment in the polymer conformations occurred, and the film exhibited different motion modes and temperature fields under different pressure loads. This work studied polymer thin film lubricant via energy transfer and molecular motion at a molecular level and gave a fundamental understanding on the lubrication behavior and lubrication failure of polymer thin film in space, providing theoretical guidance in developing advanced space lubrication technology.

Topology-Directed Self-Locking of Colloidal Suprastructures

The robustness and stability of self-assembled colloidal suprastructures are pivotal and challenging in the field of soft condensed matter and nanotechnology. Herein, we develop a novel approach to “self-locking” the colloidal suprastructures to achieve excellent stability by taking advantage of the topology of polymer brushes on nanoparticles. Compared to linear polymer brushes, looped polymer brushes can significantly improve the structural stability of the suprastructures. A combination of experiments and simulations reveals that the suprastructures achieve their significant stabilities through a “self-locking” mechanism by forming folded entanglement between looped polymer molecules. The stabilized suprastructures can stay intact in various organic solvent environments or under heating and mechanical oscillations. Furthermore, the interparticle spacing of suprastructures can be modulated by controlling polymer conformations in an aqueous solution through varying salt concentrations. This new approach of “self-locking” provides an easy-to-operate strategy to stabilize suprastructures and modulate interparticle distances without adding chemicals, which allows the potentially wide applications of colloidal suprastructures under harsh environments.

Energetic preference and topological constraint effects on the formation of DNA twisted toroidal bundles.

DNA toroids are compact torus-shaped bundles formed by one or multiple DNA molecules being condensed from the solution due to various condensing agents. It has been shown that the DNA toroidal bundles are twisted. However, the global conformations of DNA inside these bundles are still not well understood. In this study, we investigate this issue by solving different models for the toroidal bundles and performing replica-exchange molecular dynamics (REMD) simulations for self-attractive stiff polymers of various chain lengths. We find that a moderate degree of twisting is energetically favorable for toroidal bundles, yielding optimal configurations of lower energies than for other bundles corresponding to spool-like and constant radius of curvature arrangements. The REMD simulations show that the ground states of the stiff polymers are twisted toroidal bundles with the average twist degrees close to those predicted by the theoretical model. Constant-temperature simulations show that twisted toroidal bundles can be formed through successive processes of nucleation, growth, quick tightening, and slow tightening of the toroid, with the two last processes facilitating the polymer threading through the toroid's hole. A relatively long chain of 512 beads has an increased dynamical difficulty to access the twisted bundle states due to the polymer's topological constraint. Interestingly, we also observed significantly twisted toroidal bundles with a sharp U-shaped region in the polymer conformation. It is suggested that this U-shaped region makes the formation of twisted bundles easier by effectively reducing the polymer length. This effect can be equivalent to having multiple chains in the toroid.

Role of Lipid Packing Defects in Determining Membrane Interactions of Antimicrobial Polymers.

Understanding the emergence and role of lipid packing defects in the detection and subsequent partitioning of antimicrobial agents into bacterial membranes is essential for gaining insights into general antimicrobial mechanisms. Herein, using methacrylate polymers as a model platform, we investigate the effects of inclusion of various functional groups in the biomimetic antimicrobial polymer design on the aspects of lipid packing defects in model bacterial membranes. Two antimicrobial polymers are considered: ternary polymers composed of cationic, hydrophobic, and polar moieties and binary polymers with only cationic and hydrophobic moieties. We find that differing modes of insertion of these two polymers lead to different packing defects in the bacterial membrane. While insertion of both binary and ternary polymers leads to an enhanced number of deep defects in the upper leaflet, shallow defects are moderately enhanced upon interaction with ternary polymers only. We provide conclusive evidence that insertion of antimicrobial polymers in bacterial membrane is preceded by sensing of interfacial lipid packing defects. Our simulation results show that the hydrophobic groups are inserted at a single colocalized deep defect site for both binary and ternary polymers. However, the presence of polar groups in the ternary polymers use the shallow defects close to the lipid-water interface, in addition, to insert into the membrane, which leads to a more folded conformation of the ternary polymer in the membrane environment, and hence a different membrane partitioning mechanism compared to the binary polymer, which acquires an amphiphilic conformation.

The conformational phase diagram of neutral polymers in the presence of attractive crowders.

Extensive coarse-grained molecular dynamics simulations are performed to investigate the conformational phase diagram of a neutral polymer in the presence of attractive crowders. We show that, for low crowder densities, the polymer predominantly shows three phases as a function of both intra-polymer and polymer-crowder interactions: (1) weak intra-polymer and weak polymer-crowder attractive interactions induce extended or coil polymer conformations (phase E), (2) strong intra-polymer and relatively weak polymer-crowder attractive interactions induce collapsed or globular conformations (phase CI), and (3) strong polymer-crowder attractive interactions, regardless of intra-polymer interactions, induce a second collapsed or globular conformation that encloses bridging crowders (phase CB). The detailed phase diagram is obtained by determining the phase boundaries delineating the different phases based on an analysis of the radius of gyration as well as bridging crowders. The dependence of the phase diagram on strength of crowder-crowder attractive interactions and crowder density is clarified. We also show that when the crowder density is increased, a third collapsed phase of the polymer emerges for weak intra-polymer attractive interactions. This crowder density-induced compaction is shown to be enhanced by stronger crowder-crowder attraction and is different from the depletion-induced collapse mechanism, which is primarily driven by repulsive interactions. We also provide a unified explanation of the observed re-entrant swollen/extended conformations of the earlier simulations of weak and strongly self-interacting polymers in terms of crowder-crowder attractive interactions.

Effect of Block Sequence on the Solution Self-Assembly of Symmetric ABCBA Pentablock Polymers in a Selective Solvent

Solution self-assembly of multiblock polymers offers a platform to create complex functional self-assembled nanostructures. However, a complete understanding of the effect of the different single-molecule-level parameters and solution conditions on the self-assembled morphology is still lacking. In this work, we have used dissipative particle dynamics to investigate the solution self-assembly of symmetric ABCBA linear pentablock polymers in a selective solvent and examined the effect of the block sequence, composition, and polymer concentration on the final morphology and polymer conformations. We confirmed that block sequence has an effect on the self-assembled morphologies, and it has a strong influence on polymer conformations that give place to physical gels for the sequence where the solvophilic block is located in the middle of the macromolecule. Our results are summarized in terms of morphology diagrams in the composition-concentration parameter space.

Brownian motion of flexibly linked colloidal rings.

Ring, or cyclic, polymers have unique properties compared to linear polymers, due to their topologically closed structure that has no beginning or end. Experimental measurements on the conformation and diffusion of molecular ring polymers simultaneously are challenging due to their inherently small size. Here, we study an experimental model system for cyclic polymers, that consists of rings of flexibly linked micron-sized colloids with n=4-8 segments. We characterize the conformations of these flexible colloidal rings and find that they are freely jointed up to steric restrictions. We measure their diffusive behavior and compare it to hydrodynamic simulations. Interestingly, flexible colloidal rings have a larger translational and rotational diffusion coefficient compared to colloidal chains. In contrast to chains, their internal deformation mode shows slower fluctuations for n≲8 and saturates for higher values of n. We show that constraints stemming from the ring structure cause this decrease in flexibility for small n and infer the expected scaling of the flexibility as function of ring size. Our findings could have implications for the behavior of both synthetic and biological ring polymers, as well as for the dynamic modes of floppy colloidal materials.

Conformational Regulation of Dielectric Poly(Vinylidene Fluoride)‐Based Solid‐State Electrolytes for Efficient Lithium Salt Dissociation and Lithium‐Ion Transportation

AbstractRestricted by the poor ability of polymers to dissociate lithium salts and transport ions, solid‐state polymer electrolytes (SPEs) show extremely low ionic conductivities (≈10−7–10−5 S cm−1) and transference number of lithium ions (tLi+ ≈0.2–0.4) at 25 °C. Here, a novel polymer matrix of SPEs that simultaneously promotes lithium salt dissociation and ion transportation based on a high dielectric poly(vinylidene fluoride‐trifluoroethylene‐chlorotrifluoroethylene) (TerP) and an all‐trans conformational poly(vinylidene fluoride‐trifluoroethylene) (CoP), is developed. The high dielectric constant increases the polarity of CH2CF2 polar groups; then, brings a strong electronegative end that dissociates Li+ from lithium salts. The all‐trans conformation assures all fluorine atoms locate on one side of the chain, constructing ion hopping highways. As a result, the TerP/CoP (TC) SPE exhibits a high ionic conductivity (2.37 × 10−4 S cm−1) and a quite large tLi+ of 0.61 at 25 °C. The Li/TC SPE/Li symmetric cells cycle stably for more than half a year (>4500 h) and the LiNi0.8Co0.1Mn0.1O2/TC SPE/Li cell cycles steadily for 1000 and 600 cycles at 1 C and 2 C at 25 °C, respectively. This work paves a new way to prepare high‐performance SPEs by simultaneously modulating dielectric constants and conformation of polymers.

Anisotropic van der Waals dispersion forces in polymers: Structural symmetry breaking leads to enhanced conformational search

Both structure and dynamics of (bio)polymers are profoundly affected by van der Waals interactions. Many-body van der Waals forces are shown to depend on the global conformation of polymers, in contrast with the limited distance range of widely used pairwise van der Waals models. This is shown to produce an increased smoothness of the potential energy surface and qualitatively different steady-state geometries.