Soil microbes have long been recognized to substantially affect the coexistence of pairwise plant species across terrestrial ecosystems. However, projecting their impacts on the coexistence of multispecies plant systems remains a pressing challenge. To address this challenge, we conducted a greenhouse experiment with 540 seedlings of five tree species in a subtropical forest in China and evaluated microbial effects on multispecies coexistence using the structural method, which quantifies how the structure of species interactions influences the likelihood for multiple species to persist. Specifically, we grew seedlings alone or with competitors in different microbial contexts and fitted individual biomass to a population dynamic model to calculate intra- and interspecific interaction strength with and without soil microbes. We then used these interaction structures to calculate two metrics of multispecies coexistence, structural niche differences (which promote coexistence) and structural fitness differences (which drive exclusion), for all possible communities comprising two to five plant species. We found that soil microbes generally increased both the structural niche and fitness differences across all communities, with a much stronger effect on structural fitness differences. A further examination of functional traits between plant species pairs found that trait differences are stronger predictors of structural niche differences than of structural fitness differences, and that soil microbes have the potential to change trait-mediated plant interactions. Our findings underscore that soil microbes strongly influence the coexistence of multispecies plant systems, and also add to the experimental evidence that the influence is more on fitness differences rather than on niche differences.
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