Industrially-produced carbon nanotube (CNT) networks are a promising base for high-performance, continuous CNT nanocomposites, motivating widespread use in research and application development. Floating catalyst chemical vapor deposition (FCCVD) is a scalable, widely-adopted approach for synthesis of CNT networks; however, FCCVD can yield networks with organic impurities which complicate their characterization and processing. Herein, we analyze two varieties of FCCVD-synthesized commercial CNT yarn to explore the effects of densification and purification as they relate to forming infiltrated polymer composites. First, the fluid permeabilities and porosities of neat roving and chemically-stretched CNT yarns (CSYs) are estimated and compared to gas adsorption studies, which suggest high-tenacity CSYs are largely impermeable, leading to dry-core composites when polymer infiltration is attempted. Next, the presence and effects of oxygen-rich amorphous carbon impurities in the CSYs are identified and found to exist at the scale of CNT bundles, wherein the amorphous carbon behaves like a hygroscopic polymer matrix in a composite. Removal of the amorphous carbon phase in a 130%-increase in specific surface area, as quantified by BET analysis, and a statistically significant reduction in tensile properties. We discuss challenges in estimating yarn alignment and crystallinity resulting from these factors, and place our results in context of past studies analyzing intrinsic organic coatings in FCCVD-synthesized CNT networks.