Coherent Fiber Bundle Research Articles

Design and validation of an angle-resolved low-coherence interferometry fiber probe for in vivo clinical measurements of depth-resolved nuclear morphology

We present a novel Fourier-domain angle-resolved low-coherence interferometry (a /LCI) fiber probe designed for in vivo clinical application in gastrointestinal endoscopy. The a/LCI technique measures the depth-resolved angular scattering distribution to determine the size distribution and optical density of cell nuclei for assessing the health of epithelial tissues. Clinical application is enabled by an endoscopic fiber-optic probe that employs a 2.3-m-long coherent fiber bundle and is compatible with the standard 2.8-mm-diam biopsy channel of a gastroscope. The probe allows for real-time data acquisition by collecting the scattering from multiple angles in parallel, enabled by the Fourier domain approach. The performance of the probe is characterized through measurement of critical parameters. The depth-resolved sizing capability of the system is demonstrated using single- and double-layer microsphere phantoms with subwavelength sizing precision and accuracy achieved. Initial results from a clinical feasibility test are also presented to show in vivo application in the human esophagus.

Optical transfection using an endoscope-like system

Optical transfection is a powerful method for targeted delivery of therapeutic agents to biological cells. A tightly focused pulsed laser beam may transiently change the permeability of a cell membrane to facilitate the delivery of foreign genetic material into cells. We report the first realization of an endoscope-like integrated system for optical transfection. An imaging fiber (coherent optical fiber bundle) with ∼ 6000 cores (pixels) embedded in a fiber cladding of ∼ 300 μm in diameter, produces an image circle (area) of ∼ 270 μm diam. This imaging fiber, with an ordered axicon lens array chemically etched at its exit face, is used for the delivery of a femtosecond laser to the cell membrane for optical transfection along with subcellular resolution imaging. A microcapillary-based microfluidic system for localized drug delivery was also combined in this miniature, flexible system. Using this novel system, a plasmid transfection efficiency up to ∼ 72% was obtained for CHO-K1 cells. This endoscope-like system opens a range of exciting applications, in particular, in the targeted in vivo optical microsurgery area.

Opto-electrochemical nanosensor array for remote DNA detection

A high-density array of opto-electrochemical nanosensors is presented for remote DNA detection. It was fabricated by chemical etching of a coherent optical fibre bundle to produce a nanotip array. The surface of the etched bundle was sputter-coated with a thin ITO layer which was eventually insulated by an electrophoretic paint. The fabrication steps produced a high-density array of electrochemical nanosensors which retains the optical fibre bundle architecture and its imaging properties. A DNA probe was then immobilized on the nanosensor array surface in a polypyrrole film by electropolymerisation. After hybridisation with the complementary sequence, detection of the strepavidin-R-phycoerythrin label is performed by fluorescence imaging through the optical fibre bundle itself. Control experiments and regeneration steps have also been successfully demonstrated on this nanostructured opto-electrochemical platform.

Coherent hollow-core waveguide bundles for thermal imaging

There has been very little work done in the past to extend the wavelength range of fiber image bundles to the IR range. This is due, in part, to the lack of IR transmissive fibers with optical and mechanical properties analogous to the oxide glass fibers currently employed in the visible fiber bundles. Our research is aimed at developing high-resolution hollow-core coherent IR fiber bundles for transendoscopic infrared imaging. We employ the hollow glass waveguide (HGW) technology that was used successfully to make single-HGWs with Ag/AgI thin film coatings to form coherent bundles for IR imaging. We examine the possibility of developing endoscopic systems to capture thermal images using hollow waveguide fiber bundles adjusted to the 8-10?mum spectral range and investigate the applicability of such systems. We carried out a series of measurements in order to characterize the optical properties of the fiber bundles. These included the attenuation, resolution, and temperature response. We developed theoretical models and simulation tools that calculate the light propagation through HGW bundles, and which can be used to calculate the optical properties of the fiber bundles. Finally, the HGW fiber bundles were used to transmit thermal images of various heated objects; the results were compared with simulation results. The experimental results are encouraging, show an improvement in the resolution and thermal response of the HGW fiber bundles, and are consistent with the theoretical results. Nonetheless, additional improvements in the attenuation of the bundles are required in order to be able to use this technology for medical applications.

Miniaturized selective plane illumination microscopy for high-contrast in vivo fluorescence imaging

Light-sheet-based fluorescence imaging techniques rely on simultaneous excitation of a single optical plane and thus permit high-contrast optically sectioned imaging of extended tissue samples. Here, we introduce a miniaturized fiber-optic implementation of a selective plane-illumination microscope (miniSPIM). The excitation light was delivered through a single-mode optical fiber, and a light-sheet was created with a cylindrical gradient-index lens and a right-angle microprism. Fluorescence emission was collected orthogonally to the light-sheet through a gradient-index lens assembly and a coherent fiber bundle. The end face of the fiber bundle was imaged onto a charge-coupled device camera. The spatial resolutions of the miniSPIM were 3.2 microm laterally and 5.1 microm axially. Images of fluorescent beads and neurons in mouse neocortex exhibited superior axial resolution and contrast in the miniSPIM-mode compared to images recorded in epi-illumination mode. The miniSPIM may thus enable novel in vivo imaging approaches.

Design and evaluation of an ultra-slim objective for in-vivo deep optical biopsy.

An estimated 1.6 million breast biopsies are performed in the US each year. In order to provide real-time, in-vivo imaging with sub-cellular resolution for optical biopsies, we have designed an ultra-slim objective to fit inside the 1-mm-diameter hypodermic needles currently used for breast biopsies to image tissue stained by the fluorescent probe proflavine. To ensure high-quality imaging performance, experimental tests were performed to characterize fiber bundle’s light-coupling efficiency and simulations were performed to evaluate the impact of candidate lens materials’ autofluorescence. A prototype of NA = 0.4, 250-µm field of view, ultra-slim objective optics was built and tested, yielding diffraction-limited performance and estimated resolution of 0.9 µm. When used in conjunction with a commercial coherent fiber bundle to relay the image formed by the objective, the measured resolution was 2.5 µm.

Fabrication of a Macroporous Microwell Array for Surface‐Enhanced Raman Scattering

AbstractHere, a colloidal templating procedure for generating high‐density arrays of gold macroporous microwells, which act as discrete sites for surface‐enhanced Raman scattering (SERS), is reported. Development of such a novel array with discrete macroporous sites requires multiple fabrication steps. First, selective wet‐chemical etching of the distal face of a coherent optical fiber bundle produces a microwell array. The microwells are then selectively filled with a macroporous structure by electroless template synthesis using self‐assembled nanospheres. The fabricated arrays are structured at both the micrometer and nanometer scale on etched imaging bundles. Confocal Raman microscopy is used to detect a benzenethiol monolayer adsorbed on the macroporous gold and to map the spatial distribution of the SERS signal. The Raman enhancement factor of the modified wells is investigated and an average enhancement factor of 4 × 104 is measured. This demonstrates that such nanostructured wells can enhance the local electromagnetic field and lead to a platform of ordered SERS‐active micrometer‐sized spots defined by the initial shape of the etched optical fibers. Since the fabrication steps keep the initial architecture of the optical fiber bundle, such ordered SERS‐active platforms fabricated onto an imaging waveguide open new applications in remote SERS imaging, plasmonic devices, and integrated electro‐optical sensor arrays.

Spatially resolved scattering polarimeter

We demonstrate a compact, spatially resolved polarimeter based on a coherent optical fiber bundle coupled with a thin layer of scattering centers. The use of scattering for polarization encoding allows the polarimeter to work across broad angular and spectral domains. Optical fiber bundles provide high spatial resolution of the incident field. Because neighboring elements of the bundle interact with the incident field differently, only a single interaction of the fiber bundle with the unknown field is needed to perform the measurement. Experimental results are shown to demonstrate the capability to perform imaging polarimetry.

Experimental and theoretical analysis of core-to-core coupling on fiber bundle imaging

Flexible endoscopes commonly use coherent fiber bundles with high core density to facilitate in vivo imaging. Small, closely spaced cores are desired for achieving a high number of resolvable pixels in a small diameter fiber bundle. On the other hand, closely spaced cores potentially lead to strong core-to-core coupling. Based on numerical simulations, it was previously explained that image fiber bundles can successfully transmit images because of nonuniformities in the core size that reduce coupling. In this paper, we show numerically and experimentally that, due to the randomness of the structural nonuniformity, significant core-to-core coupling still exists in fiber bundles that are routinely used for imaging. The coupling is highly dependent on the illumination wavelength and polarization state. We further show that the resolution achievable by a fiber bundle depends not only on the core density, but also on the inter-core coupling strength. Finally, we propose that increasing the core-cladding index contrast is a promising approach to achieve a fiber bundle with low core coupling, high core density, and effectively single moded propagation in individual cores.

A flexible luminescent probe to monitor fast ion losses at the edge of the TJ-II stellarator

A mobile luminescent probe has been developed to detect fast ion losses and suprathermal ions escaping from the plasma of the TJ-II stellarator device. The priorities for its design have been flexibility for probe positioning, ease of maintenance, and detector sensitivity. It employs a coherent fiber bundle to relay, to the outside of the vacuum chamber, ionoluminescence images produced by the ions that impinge, after entering the detector head through a pinhole aperture, onto a screen of luminescent material. Ionoluminescence light detection is accomplished by a charge-coupled device camera and by a photomultiplier, both of which are optically coupled to the in-vacuum fiber bundle head by means of a standard optical setup. A detailed description of the detector, and the first results obtained when operated close to the plasma edge, are reported.

High Angular Resolution Diffusion MRI Segmentation Using Region-Based Statistical Surface Evolution

In this article we develop a new method to segment high angular resolution diffusion imaging (HARDI) data. We first estimate the orientation distribution function (ODF) using a fast and robust spherical harmonic (SH) method. Then, we use a region-based statistical surface evolution on this image of ODFs to efficiently find coherent white matter fiber bundles. We show that our method is appropriate to propagate through regions of fiber crossings and we show that our results outperform state-of-the-art diffusion tensor (DT) imaging segmentation methods, inherently limited by the DT model. Results obtained on synthetic data, on a biological phantom, on real datasets and on all 13 subjects of a public NMR database show that our method is reproducible, automatic and brings a strong added value to diffusion MRI segmentation.

Surface strain measurement using multi-component shearography with coherent fibre-optic imaging bundles

Shearography is a full-field interferometric speckle technique used to determine displacement derivatives. Measurement of surface strain is possible using shearography if six components of displacement gradient are calculated. This can be achieved using shearography instrumentation that incorporates at least three measurement channels combined with two orthogonal shear directions. This paper presents a laser shearography instrument that utilizes coherent imaging fibre bundles to port four spatially multiplexed speckle images to a single CCD camera via a shearing Michelson interferometer. The four images are spatially multiplexed onto the sensor of a CCD camera. Wrapped phase maps are derived from the recorded speckle interferograms using temporal phase stepping. The unwrapped phase maps are combined with the measurement channel sensitivity vectors using a matrix operation to determine the required displacement derivatives. Results from an out-of-plane displacement of a flat aluminium plate are presented and compared with a computational model. Results from a second test object that show in-plane and out-of-plane strain components are also shown.

Advances in fibre-optic sensing in medicine and biology

This paper presents a review of medical and biological applications of optical fibres, which span a wide range from light-pipes and pressure or displacement sensors through to complex chemical sensors. Coherent fibre bundles are needed for endoscopic imaging whilst single fibres may be used in both near infrared tomography and optical coherence tomography. Delivery of light to tissues, for example to activate targeted chemo-therapeutic agents (PDT), is also achieved conveniently with fibres. Chemical sensing can simply be achieved by transporting light to and from a measurement site with a plain fibre light guide for spectrophotometric or fluorimetry analysis. A further family of fibre-optic chemical sensors has either surface attached molecular recognition sites or a reaction chamber for achieving specific molecular detection. These chemical sensors may be based on the principles of surface plasmon resonance, interferometry, spectrophotometry or fluorimetry. Biological recognition with enzymes or antigen–antibody binding are used to achieve high specificity. The range of potential target molecules has increased rapidly over recent years from simple gases and ions through to large molecules such as DNA.

Remote in vivo imaging of human skin corneocytes by means of an optical fiber bundle

Human corneocytes forming the outermost layer of the epidermis (stratum corneum) were imaged in vivo by epifluorescence through a coherent optical fiber bundle. A very simple and rapid method to remotely visualize the cells forming this protective layer of the skin is presented. After the topical application of fluorescein, the distal face of an optical fiber bundle is gently applied perpendicularly onto the labeled skin (contact mode). Remote fluorescence images of the corneocytes are acquired in 50 ms through the bundle comprising 30 000 individually cladded 3.5 microm diameter optical fibers. The very short focal distance which is an intrinsic characteristic of such bundles, allows visualizing only the most superficial monolayer of cells in contact with the external environment. An image displays about 400-500 cells directly on the human body. The size and the arrangement of the corneocytes can thus be acquired and analyzed in a very simple and easy way. The method is flexible and can be used for any location on the human body. Using a gradient-index lens objective (magnification 2.8x) fused to the distal face of the bundle allows the shape of the corneocytes to be better resolved. In addition, the working distance is 300 microm and hence this second approach works in a noncontact imaging mode. Both approaches are complementary and allow providing instantaneously either a global view of the cells with a possible statistical determination of their area or morphological information, which are essential for dermatology and cosmetic sciences. Finally, to improve the quality and the contrast of the recorded images, we tested silica nanoparticles containing fluorescein. In brief, this diagnostic method is nontoxic, painless, easy to use, noninvasive, and nondestructive.

Equivalent geometric transformations for spin and orbital angular momentum of light

We consider the analogous geometric transformations for spin and orbital angular momentum states of light. Spin angular momentum is manifested as polarization and its possible transformations are typified by those introduced by waveplates and the rotation associated with optical activity. Orbital angular momentum is associated with the mode structure of the beam and, while the action of a waveplate is similar to that of a mode converter, the equivalent analogue of optical activity is not obvious. We reason that the equivalent is a rotation of the transmitted image. We consider the extent to which an image orientation of this type might be achieved by a coherent fibre bundle, twisted around its central axis. The possibility of equivalents to the Kerr, Pockels and Faraday electro-optic effects for orbital angular momentum is raised.

Numerical analysis of light propagation in image fibers or coherent fiber bundles

The coupling properties of multi-core fibers are analyzed using the multipole method and coupled mode theory in order to gain insights into the performance of image fibers that are commonly used in flexible endoscopes. It is explained that coherent fiber bundles with high core density are able to transport images because nonuniformity in the pixel size reduces the inter-core coupling that causes crosstalk. The wavelength, average core size and separation, and degree of core size variation determine the strength of coupling between adjacent cores, such that fibers with a smaller core size and separation at longer wavelengths require more nonuniformity in order for reliable image transmission. Guidelines are given for assessing the performance of image fibers in a particular system.

Imaging system for hypervelocity dust injection diagnostic on NSTX

The novel hypervelocity dust injection diagnostic will facilitate our understanding of basic aspects of dust-plasma interaction and magnetic field topology in fusion plasma devices, by observing “comet tails” associated with the injected micron-size dust particles. A single projection of the tail onto an image plane will not provide sufficient information; therefore, we plan to use two views, with intensified DiCam-Pro cameras on two NSTX ports. Each camera can furnish up to five overlaying sequential images with gate times greater than 3ns and 1280×1024pixel resolution. A coherent fiber bundle with 1500×1200 fibers will relay the image from an imaging lens installed directly on the port to the camera optics. The lens receives light from the outer portion of the NSTX cross section and focuses a 1cm tail onto at least 60 fibers for adequate resolution. The estimated number of photons received by the camera indicates signal-to-noise ratios of 102–104, with the use of a 10nm bandwidth filter. The imaging system with one camera was successfully tested on NSTX in 2005. Photographing lithium pellets yielded bright and distinctive pictures of the tails nearly aligned with B lines. We also observed that the bright “filaments”—plasma cords with high density and temperature—are present in both top and bottom portions of the machine.

Development of an ordered microarray of electrochemiluminescent nanosensors

A microarray of electrochemiluminescent (ECL) nanosensors for remote detection is reported. Such nanosensor arrays were created on the distal face of coherent optical fibre bundles by adapting near-field optical probe and nanoelectrode methodologies. The fabrication process allows the production of high-density microarrays of nanosensors where each optical aperture is surrounded by a gold nanoring electrode. The initial architecture of the optical fibre bundle is retained and thus the microarray keeps its imaging properties. The electrochemical response of the array displays a steady-state current. This feature indicates that the nanoelectrodes forming the array can be considered as diffusively independent. In other words, each ring-shaped electrode of the array probes electrochemically a different micro-environment. We also show that this microdevice can be used as an ECL nanosensor microarray. Indeed, ECL light is initiated by the gold nanoring electrode in the presence of a co-reactant biospecies, NADH. A fraction of the isotropically electrochemically generated light is collected by the same aperture, transmitted by the corresponding fibre core and eventually imaged by a CCD camera. The gold coating therefore acts as an electrode material and also to confine the ECL light in each etched core. Such nanostructured microdevice integrates ECL-light generation, collection and imaging in a microarray format.

Fourier-domain angle-resolved low coherence interferometry through an endoscopic fiber bundle for light-scattering spectroscopy

We present a novel endoscopic fiber bundle probe incorporated in a Fourier-domain angle-resolved low coherence interferometry system for the measurement of depth-resolved angular scattering distributions to permit the determination of scatterer size via elastic scattering properties. Depth resolution is achieved with a superluminescent diode via a Mach-Zehnder interferometer. The sample is illuminated with a collimated beam, and a Fourier plane image of the backscattered light is collected by a coherent fiber bundle. The angular scattering distribution relayed by the fiber bundle is mixed with the reference field and made to coincide with the input slit of an imaging spectrograph. The data collected are processed in real time, producing a depth-resolved angular scattering distribution in 0.37 s. The data are used to determine the sizes of polystyrene microspheres with subwavelength precision and accuracy.

Remote NADH imaging through an ordered array of electrochemiluminescent nanoapertures

In this report, we present an ordered array comprising thousands of nanoapertures for the electrochemiluminescent (ECL) detection of NADH. It was fabricated on the distal face of a coherent optical fiber bundle. Such a high-density array of nanoapertures combines optical, imaging and electrochemical properties. Indeed, each nanoaperture is surrounded by a gold nanoring, which acts as an electrode material. The behavior of the array was characterized by cyclic voltammetry and it shows excellent electrochemical performances. NADH is the analyte, which is measured in presence of Ru(bpy) 3 2+. The ruthenium complex mediates the NADH oxidation and this coenzyme acts as a co-reactant in the ECL mechanism. ECL light is generated at the distal face of the array by each gold ring electrode. A fraction of this ECL light is collected by the corresponding nanoaperture, transmitted through the optical fiber bundle and finally imaged on the proximal face with a CCD camera. In this work, we show that NADH concentration is remotely detected by an oxidative-reductive ECL mechanism. We present also some preliminary results about the ECL process of NADH with Ru(bpy) 3 2+. The ECL behavior of NADH on gold surface is reported. The influence of the applied potential on the collected light intensity was investigated. The variation of the ECL intensity measured through the nanoaperture array with NADH concentration is linear. Remote ECL detection of NADH is spatially resolved over a large area with a micrometer resolution through the array. Therefore, such array integrates several complementary functions: ECL light generation, collection, transmission and remote imaging in an array format.