Coast Of South Africa Research Articles

A brief overview of the ACEP project: Ecosystem Processes in the KwaZulu-Natal Bight

This introductory paper lays the basis for this supplementary issue by briefly presenting the state of knowledge on the KwaZulu-Natal (KZN) Bight at the start of this multi-disciplinary, multi-institutional, ship-based research project that ran from 2009 to 2013. The rationale and aims of the project are also described. The project was a major component of the South African Department of Science and Technology’s African Coelacanth Ecosystem Programme (ACEP), which has been prominent in supporting research on the east coast of South Africa and the wider South-West Indian Ocean. Pivotal to this was the RS Algoa, which was made available for two 30-day surveys (winter and summer) in the KZN Bight by the Department of Environmental Affairs. Although some aspects of the bight ecology are known, much of the research is dated and fragmented, and required refreshing and consolidation in order to produce a platform upon which the understanding of the region’s ecosystem functioning could be established. Much of the oceanographic knowledge is also dated, with no dedicated surveys and significant measurements undertaken since 1989. The overarching theme of the KZN Bight project was to examine the relative importance of sources of nutrients to the central KZN coast and how these are taken up and recycled in the ecosystem, and to describe aspects of the benthic biodiversity, which is poorly described in much of this region. An ambitious project, its accessibility to a ship-based research platform and the diverse scientific skills of the participating scientists allowed considerable success, as reflected in the papers that follow.

Subtropical demersal fish communities on soft sediments in the KwaZulu-Natal Bight, South Africa

The project entitled Ecosystem Processes in the KwaZulu-Natal Bight, part of the African Coelacanth Ecosystem Programme (ACEP), enabled the description of demersal fish communities over soft sediments, including from some areas that have rarely been explored in the subtropical waters of the east coast of South Africa. A total of 165 fish taxa from 78 families were caught, and were dominated by the Sparidae (five species), Triglidae (four species), Acropomatidae (three species), Macrouridae (eight species), Chlorophthalmidae (one species), Paralichthyidae (three species) and Sciaenidae (six species), which together contributed 75% and almost 60% to numbers and weight, respectively. The most ubiquitous species were Chlorophthalmus punctatus and Pagellus natalensis. Species composition was structured mainly by depth, and proximity to the Thukela River, the latter being particularly influential on the adjacent Thukela Bank that harbours a unique community. There are close affinities between KZN Bight soft-sediment fish communities and those off Western Australia, and particularly with communities from East Africa. The unique nature of fish communities off the Thukela River is part-motivation towards the establishment of a large marine protected area in the northern part of the KZN Bight, which is increasingly the focus of disruptions such as impoundments and mining.

Riverine influence determines nearshore heterogeneity of nutrient (C, N, P) content and stoichiometry in the KwaZulu-Natal Bight, South Africa

Riverine influences on nearshore oceanic habitats often have detrimental consequences leading to algal blooms and hypoxia. In oligo- to mesotrophic systems, however, nutrient delivery via rivers may stimulate production and even be a vital source of nutrients, as may nutrient supplements from upwelling. We investigated the nutrient content (C, N, P) and stoichiometry of sediment, and several pelagic, benthopelagic and benthic species in the KwaZulu-Natal (KZN) Bight, a narrow shelf area on the south-east coast of South Africa, bordering the Agulhas Current. Three suggested nutrient sources to the bight are the Thukela River in the central region of the bight, upwelling in the northern part and a semi-permanent eddy (Durban Eddy) in the southern part. Elemental content of the various groups studied showed significantly higher values for most groups at the site near the Thukela River. C:P and N:P were highest in the southern part of the bight, and lowest near the Thukela Mouth or at Richards Bay in the north, indicating the latter were the P-richer sites. Sediment organic matter showed lowest elemental content, as expected, and zooplankton stoichiometry was highest compared to all other biotic groups. Environmental heterogeneity played a greater role in organismal C, N and P content and stoichiometry compared to phylogeny, with the exception of the differences in C:P and N:P of zooplankton. From this bight-wide study, the higher elemental content and lower ratios at the Thukela Mouth site supported previous findings of the importance of coastal nutrient sources to the bight ecosystem. Reductions in river flow for water use in the catchment areas may therefore have negative consequences for the productivity of the entire ecosystem.

Observations and mechanisms of upwelling in the northern KwaZulu-Natal Bight, South Africa

New in situ time-series data were acquired by two ADCP moorings placed on the shelf off Richards Bay on the east coast of South Africa at depths of 25 m and 582 m between October 2009 and August 2010. The 11-month inshore bottom-temperature record revealed five substantial upwelling events lasting 5–10 days each where temperatures decreased by about 7 °C to 17–18 °C. Satellite sea surface temperature data showed these events to coincide with cold-water plumes occupying the northern wedge of the KwaZulu-Natal (KZN) Bight. Numerous shorter duration (1–2 days) upwelling events with less vivid surface expressions were also observed throughout the entire record where bottom temperature dropped by 2–3 °C. The last four months of the record were characterised by a protracted cool period lacking a seasonal trend but punctuated with oscillations of warm and cooler bottom water. In contrast to earlier studies that suggested upwelling was topographically and dynamically driven by the juxtaposition of the Cape St Lucia offset and the Agulhas Current (a solitary mechanism), our analysis showed almost all major and minor cold-water intrusions to coincide with upwelling-favourable north-easterly winds that simultaneously force a south-westerly coastal current. Ekman veering in the bottom boundary layer of the Agulhas Current, and the concomitant movement of cold water up the slope, was found to coexist at times with coastal upwelling, but its absence did not impede inshore cold-water intrusions, calling into question its role as a primary driver of upwelling. Both major and minor upwelling events were observed to promote phytoplankton blooms in the northern KZN Bight which commonly extended to the Thukela River. Wind-driven upwelling was also observed in the inner bight between Richards Bay and Port Durnford, explaining the ribbon of coastal chlorophyll continuously observed on ocean colour images between Cape St Lucia and the Thukela River. Similarities in upwelling character and mechanisms are observed between the northern KZN Bight and the Florida Current shelf systems.

Distribution of calcareous nannoplankton in surface sediments along the northern KwaZulu-Natal Bight, South Africa

The coccolith assemblages from seafloor sediments over the inner shelf in the northern region of the KwaZulu- Natal Bight on the east coast of South Africa were identified and their distribution determined. In all, 29 Recent species and taxonomic groups, as well as 29 reworked species were recorded. The distribution of the Recent species appears to be governed by environmental features that have been documented in other studies: temperature, salinity, nutrient concentration and water circulation pattern, which reveals the long-term existence of a circulation cell in the sector between Durban Bay and the Thukela River. The outer edge of the cell consists of nutrient-enriched mixed layers and is characterised by an enhanced abundance of Gephyrocapsa oceanica, whereas the central region consists of a stratified nutrient-depleted water mass with elevated abundance of Umbilicosphaera sibogae, Florisphaera profunda, and a group of umbelliform species. The elevated levels of G. oceanica, coupled with the rarity of U. sibogae, F. profunda and the umbelliform species, confirm the presence of a permanent upwelling cell off Richards Bay. The maximum abundance of F. profunda found between Richards Bay and Lake Nhlabane indicates a region of nutrient-depleted (except for nitrite) conditions.

Distribution and feeding modes of macrobenthos within three oceanographic feature areas of the KwaZulu-Natal Bight, South Africa

The composition and distribution of macrobenthic communities was investigated in three areas in the KwaZulu- Natal Bight, a section of shelf off the east coast of South Africa. Areas were pre-selected on the basis of three known oceanographic features, posited to deliver land- or Agulhas Current-derived nutrients onto the shelf and to drive ecosystem functioning in this region. Replicate sediment samples were collected with a 0.2 m2 van Veen grab, during two surveys (A, B) corresponding with normal periods of high and low rainfall, respectively. A subset of the full station array was selected across the shelf in an arrangement of increasing depths (inner-, mid- and outer shelf) through each feature area to investigate the spatial distribution and feeding modes of macrobenthic taxa. The two periods showed some differences in abundance and numbers of macrobenthic taxa, but were not statistically different. Total macrobenthic abundance from Survey A was 20 215 individuals from 642 taxa, decreasing to 18 000 individuals from 503 taxa during Survey B. Polychaeta and Crustacea were the dominant taxa sampled; abundance of the latter was attributed largely to a proliferation of Paguristes sp.1 at inner-shelf samples in the midbight (Thukela) region during Survey B. Similarity classification distinguished seven sample groups reflecting differences in feature areas and shelf positions under investigation. The Thukela River midshelf community supported the highest macrobenthic abundance, while the midshelf off the southern bight (Durban region) was most species rich. Findings were attributed to the habitat complexity of the midshelf which includes a palaeo-dune cordon at the 60 m isobath. Functionally, the community was dominated by interface- and deposit-feeding fauna, emphasising the importance of trophic plasticity in an environmentally variable and heterogeneous shelf environment.

Species composition, abundance and biomass of microphytoplankton in the KwaZulu-Natal Bight on the east coast of South Africa

Nearshore marine environments are influenced by an array of variables that can either be land-derived or of marine origin, and nearshore phytoplankton communities may differ in their taxonomic composition and biomass in response to such variables. The KwaZulu-Natal Bight (hereafter referred to as ‘the bight’) is an oligo-mesotrophic, nearshore oceanic environment, that is influenced by both terrestrial run-off and upwelling. A microphytoplankton survey of the bight conducted over several stations and depths and two seasons was conducted in order to ascertain species composition, abundance and biomass. Microphytoplankton abundance was generally low (a maximum of 180 000 cells l–1 was recorded) but differed considerably between sites and seasons. A total of 99 taxa of mainly Bacillariophyceae and some Dinophyceae, Prymnesiophyceae and Cyanophyceae were identified in the present study. In the central bight, higher abundance and biomass were measured in February (wet season), which may be a possible consequence of terrestrial nutrient inputs. In the northern and southern bight we measured higher abundance and biomass in August (dry season). Upwelling was not detected during the study, but an influence of terrestrial nutrient sources was detected at the coastal stations. Turbid conditions were specific to the site near the Thukela River mouth and possibly influenced abundance, biomass and species composition at this site. Historic data on microphytoplankton composition are scarce, but comparisons with surveys from the 1960s reveal that around 60% of the common diatoms recorded then also occurred in the present study. Small taxa [20–200 µm] dominated the microphytoplankton community. Community composition was fairly uniform throughout the bight in both seasons, dominated in general by Chaetoceros species, and on occasion co-dominated by Thalassionema nitzschioides and Dactyliosolen fragilissimus.

Holocene vegetation and climate variability between winter and summer rainfall zones of South Africa

To better understand Holocene vegetation and hydrological changes in South Africa, we analyzed pollen and microcharcoal records of two marine sites GeoB8331 and GeoB8323 from the Namaqualand mudbelt offshore the west coast of South Africa covering the last 9900 and 2200 years, respectively. Our data corroborate findings from literature that climate developments apparently contrast between the summer rainfall zone (SRZ) and winter rainfall zone (WRZ) over the last 9900 years, especially during the early and middle Holocene. During the early Holocene (9900–7800 cal. yr BP), a minimum of grass pollen suggests low summer rainfall in the SRZ, and the initial presence of Renosterveld vegetation indicates relatively wet conditions in the WRZ. Toward the middle Holocene (7800–2400 cal. yr BP), a rather moist savanna/grassland rich in grasses suggests higher summer rainfall in the SRZ resulting from increased austral summer insolation and a decline of fynbos vegetation accompanied by an increasing Succulent Karoo vegetation in the WRZ, which possibly suggests a southward shift of the Southern Hemisphere westerlies. During the last 2200 years, a trend toward higher aridity was observed for the SRZ, while the climate in the WRZ remained relatively stable. The ‘Little Ice Age’ (ca. 700–200 cal. yr BP) was rather cool in both rainfall zones and drier in the SRZ while it was wetter in the WRZ.

A Holocene vegetation history from the southern Cape coast of South Africa: palynological and microcharcoal evidence from Eilandvlei

A Holocene vegetation history from the southern Cape coast of South Africa: palynological and microcharcoal evidence from Eilandvlei

Holocene marine radiocarbon reservoir correction delta R for the west coast of South Africa

Holocene marine radiocarbon reservoir correction delta R for the west coast of South Africa

Age and growth of Cape stumpnose Rhabdosargus holubi (Pisces: Sparidae) in the Eastern Cape, South Africa

Rhabdosargus holubi is a small (maximum weight=2.4 kg) yet important fishery species in the estuaries of the south-east coast of South Africa. Little is known of its biology and specifically its growth rate, which is essential for sustainable management of the fishery. We examined and counted the opaque zones in the sectioned otoliths of 134 R. holubi to determine its age and growth parameters. The otoliths from two recaptured fish marked with oxytetracycline confirmed that one opaque zone was deposited annually. The species reached a maximum age of 18 years and growth was adequately described by a von Bertalanffy growth function of the form: Lt = 358.1 (1 – e−0.24(t+0.77)) mm fork length. There were no significant differences between any of the male and female growth parameters (likelihood ratio test: p = 0.3). The growth was slow (omega index: ω = 86.56); however, despite this, the unique life history of R. holubi may provide a degree of resilience to heavy fishing pressure in estuaries.

PUTTING PAID TO THE UNTOUCHABLES? The effects of dissolving the Directorate of Special Operations and the Specialised Commercial Crime Units

When law enforcement agencies arrest abalone poachers on the Western Coast of South Africa, they may not be aware that the drying and processing of the delicacy takes place in Gauteng and that the buyers are organised crime networks in China. It will not be evident that the criminals use the profits (at about R1 400 per kilogram) to buy drugs for the local Southern African market. The syndicate or loose network of crime groups may have a distribution chain of dispensable individuals of different nationalities encompassing several countries, specialising in particular aspects of the trade and dealing in a wide variety of illegal goods. Indeed, the arrest of the poachers is unlikely to reveal that the profits are being used to barter for drugs and that a large number of illegal and apparently legal companies are being used to transfer money across the globe. Catching these kinds of transnational, cross-border, multi-ethnic and flexible criminal groups is difficult unless law enforcement agencies have a multi-faceted strategy, use the skills of a wide range of personnel and have the time and resources to investigate and prosecute them effectively. Traditional law enforcement is geared towards arresting the criminal ‘runners’ rather than the ‘kingpins’. The DSO and the SCCU acquired a reputation as the ‘untouchables’ – units that are admired, revered and feared – and it seems unlikely that their replacement will enjoy the same success and reputation.

Subtidal macrozoobenthic community resilience to change following natural mouth breaching of the temporarily open/closed East Kleinemonde Estuary, South Africa

The East Kleinemonde Estuary, on the south-east coast of South Africa, typically opens for only short periods, usually <10 days. During a nine-month study in 2006, marine influence persisted for a near-continuous period of three months. This provided an opportunity to explore potential changes in the structure and pattern of the subtidal estuarine macrozoobenthic community. Salinity changes were minimal after mouth opening, decreasing by c. 4 and 8 in the lower and upper estuary, respectively. Salinity decrease was due to river dominance over tidal influence. Two biotic assemblages, structured by sediment characteristics, typified the community throughout the study: a sand-associated group near the mouth and a mud-associated group upstream. Amphipods were proportionally the most abundant group within each assemblage and on each sampling occasion. At the species level, high variability typified the community, with no trends or patterns observed. However, species richness declined from 27–30 to 23 after mouth opening. The number of species returned to former levels at the time of the final survey and just before final mouth closure. An analysis of the subtidal macrozoobenthos in the East Kleinemonde and other temporarily open/closed estuaries (TOCEs) of similar size in the bioregion indicated that communities were typically composed of relatively few, broadly tolerant euryhaline species with no species unique to TOCEs.

A preliminary fish survey of the estuaries on the southeast coast of South Africa, Kayser’s Beach – Kei Mouth: a comparative study

A basic ichthyofaunal and physico-chemical survey of estuaries on the southeast coast of South Africa from Kayser’s Beach to Kei Mouth was undertaken during September and October 1996. Twenty-eight (28) estuaries have been identified along this stretch of coastline, and these were grouped into three types: small ( 10 ha) predominantly closed estuaries, and predominantly open estuaries. Multivariate analyses revealed significant differences between estuarine types both in terms of their physico-chemical characteristics and fish communities. These features were consistent with those reported in other parts of the south and southeast coast. Overall, predominantly closed estuaries had a lower species diversity than predominantly open estuaries and smaller systems had a lower species diversity than moderate to large systems. Although differences were observed between estuarine types, most systems provided important habitat for a number of estuarine-dependent marine species as well as resident species, which were often recorded in high numbers. Many of these species were also endemic, which further emphasises the importance of these estuaries in maintaining ichthyofaunal diversity in the region. This survey represents one of the few fish surveys undertaken along this little-studied section of coastline. Keywords: ichthyofauna, estuarine survey, fish habitat, southeast coast

Some deep-water cheilostome Bryozoa from the south coast of South Africa

Twelve species of deep-water cheilostome Bryozoa are reported from an incidental deep-water collection from the south coast of South Africa. The collection represents nine families and ten genera. One species, Arthropoma lioneli sp. nov., is new to science. The results reinforce the need for targeted sampling of South Africa's poorly known deep-water benthic fauna to assist the assignment of offshore marine protected areas within its Exclusive Economic Zone. With the addition of the new species, the bryozoan fauna of South Africa comprises no fewer than 271 valid marine species.

A new species of Taylorius (Bryozoa: Escharinidae) from the east coast of South Africa

A new species of Escharinidae, Taylorius nyembezi sp. nov., is described and illustrated from material collectedby the R.V. Meiring Naude cruises at 90 m depth off the east coast of South Africa in 1979 and lodged in the collections of the Iziko Museums of South Africa, Cape Town and The Natural History Museum, London. The specimens were previously reported as conspecific with recent and fossil specimens from New Zealand and misidentified as Escharina waiparaensis (Brown, 1952) by Hayward & Cook (1983). Subsequently Gordon (2014) clarified the taxonomic status of the unique species that constitutes Escharina waiparaensis. In this paper we erect Taylorius nyembezi sp. nov., for the South African specimens based on its unique anter and sinus shape, metrics of its zooids and orifices, and the large size and position of the spine bases.

First survey of fishes in the Betty's Bay Marine Protected Area along South Africa's temperate south-west coast

This first survey of fish in the Betty's Bay Marine Protected Area (MPA), on the south coast of South Africa, was conducted using baited remote underwater video systems (BRUVs). A total of 58 deployments recorded 42 species in 20 km2, including reef, kelp and sand habitats in protected and exploited zones, at between 5 and 40 m depth. Chondrichthyans accounted for 28% of diversity. Teleost diversity was dominated by Sparidae, Cheilodactylidae, Sciaenidae and Ariidae. Diversity (H′) was highest in kelp and lowest over sand. Species composition differed among habitat and depths, but protection had no effect. Among four commercial species, only Pachymetopon blochii responded positively to protection. The apparent failure of protection may attest to poor compliance, but an investigation into fish size might show an effect. Many species were detected at the western extreme of their range. Diversity in Betty's Bay was predictably lower than in the more eastward Stilbaai MPA, but also lower than in the westward Table Mountain National Park MPA. Fish diversity did not follow a linear increase eastwards from Cape Point. Betty's Bay includes the most easterly protected kelp forests and contains seven species not recorded in the other two areas, and is therefore an important element in the MPA network.

Saldanha Bay, South Africa II: estimating bay productivity

Saldanha Bay is a narrow-mouth bay on the west coast of South Africa linked to the southern Benguela upwelling system. Bay productivity was investigated by use of the conventional light-and-dark bottle oxygen method, and, for comparison, through assimilation of the stable isotope tracer 13C. Gross community production GCP and net community production NCP, as determined from the oxygen method, were respectively 2.6 and 2.4 times higher than estimates determined from the stable isotope method. Chlorophyll a (Chl a) concentrations increased with the onset of spring and well-defined subsurface maxima developed in association with increasingly stratified conditions (mean water column Chl a concentrations ranged from 5.4 to 31.5 mg m−3 [mean 15.5 mg m−3; SD 7.6]). A sharp decline in photosynthetic rates P* (GCP normalised to Chl a concentration) with depth was attributed to light limitation, as demonstrated by the high vertical attenuation coefficients for downward irradiance Kd, which varied from 0.29 to 0.70 m−1 (mean 0.48 m−1; SD 0.12). Productivity maxima were consequently near-surface despite the presence of deeper subsurface biomass maxima. The community compensation depth Zcc, where gross community production balances respiratory carbon loss for the entire community, ranged from 2.9 to 9.2 m (mean 5.8 m; SD 2.2), and was typically shallower than the 1% light depth for PAR (photosynthetically available radiation), Z1%PAR, which is traditionally assumed to be the depth of the euphotic zone and which ranged from 6.6 to 15.9 m (mean 9 m; SD 2.6). Autotrophic communities, where organic matter is produced in excess of respiratory demand, were confined on average to the upper 5.8 m of the water column, and often excluded the bulk of the phytoplankton community, where light limitation is considered to lead to heterotrophic community metabolism. Estimates of integrated water column productivity ranged from 0.84 to 8.46 g C m–2 d−1 (mean 3.35 g C m−2 d−1; SD 1.9).

Siphonostomatoid copepods infecting Squalus acutipinnis Regan, 1908 off South Africa

Squalus acutipinnis (previously included in S. megalops) individuals caught off the east, south and west coasts of South Africa were examined for siphonostomatoid copepod infection. Collected siphonostomatoids were fixed and preserved in 70% ethanol and studied under microscopes using both transmitted and incidental light. The copepods were identified and the host-parasite associations estimated by calculating their prevalence, mean intensity and mean abundance. The siphonostomatoids represented four families and six species, and included new host records for Nemesis sp., Lernaeopoda sp. and Eudactylina acanthii, and a new geographical record for E. acanthii. Squalus acutipinnis individuals were infected by relatively low loads of siphonostomatoids. The most commonly found species was Achtheinus pinguis, the only species found off all three coasts. There was no difference in the prevalence of A. pinguis in sharks sampled off the three coasts but the highest mean intensity was found on the East Coast followed by the West Coast. The overall prevalence of A. pinguis was 33.6%, and was an order of magnitude higher than that of the other siphonostomatoids recorded. At such low levels of infection it will thus be necessary to examine a large number of hosts to determine the biodiversity of siphonostomatoids and geographical differences in prevalence in South African waters.

The Chilean black urchin, Tetrapygus niger (Molina, 1782) in South Africa: gone but not forgotten

It is important to keep lists of invasive and alien species up to date, but it can be difficult to determine when species should be removed from such lists. One such example is the urchin, Tetrapygus niger (Molina, 1782), which is believed to have been unintentionally introduced to Alexander Bay on the west coast of South Africa with oyster spat imported for aquaculture (the only recorded alien population of T. niger globally). This species is a kelp grazer in its native range, capable of converting healthy kelp populations to barren landscapes. This study involved the re-survey of two aquaculture dams in September 2014, which previously contained the urchin, as well as intertidal and subtidal transects of the surrounding coast. Tetrapygus niger were absent from all sites, despite the presence of a healthy population of native urchins Parechinus angulosus (Leske, 1778). There was also little indication of urchin grazing on kelp stipes. As a result of this absence record, it is recommended that T. niger be removed from the South African list of introduced marine species, and from global lists of invasive species.