Coastal Transect Research Articles

Phenology and population radiation of the nettle caterpillar, Darna pallivitta (Moore) (Lepidoptera: Limacodidae) in Hawai’i

The nettle caterpillar, Darna pallivitta (Moore) (Lepidoptera: Limacodidae), is an invasive pest with established populations on three Hawai’ian islands. Indigenous to Southeast Asia, D. pallivitta caterpillars cause defoliation of ornamental nursery stock and pose a human health hazard due to their urticating hairs that can cause painful skin reactions. Identification of the pheromone component n-butyl (E)-7,9-decadienoate (E7,9-10:COOnBu) from D. pallivitta has made it possible to investigate the phenology and population dynamics using baited traps. Male captures in Jackson traps baited with E7,9-10:COOnBu showed a vegetation preference for tall-grass fields and forest/grass interfaces over forest areas. Microlocation preferences were also found for trap height, with over 65% of males being caught in traps suspended at 1 m, compared with the traps at 3 and 5 m. Captures of male moths in traps baited with live females, and direct observations of female calling behavior, showed peak activities 6–7 h after the onset of scotophase. This is a much later communication period than for D. bradleyi and D. trima and may provide a mechanism by which D. pallivitta maintains reproductive isolation in areas where all three species are present. Coastal and inland transects established in eastern Hawai’i measured aspects of population fluctuations and radiation into new areas with relation to elevation and microclimate. Population expansion was measured by comparing moth population means and 80% population boundaries over time. Both population measures showed a higher expansion for the coastal transect. Differences in population expansion may be attributed in part to temperature and elevation, while precipitation does not seem to have a strong effect. Both the behavioral and ecological data collected can be used to optimize deployment of detection/control strategies and to predict population expansion/risk assessment for establishing quarantine protocols for the nettle caterpillar.

Landscape analysis and pattern of hurricane impact and circulation on mangrove forests of the Everglades

The Everglades ecosystem contains the largest contiguous tract of mangrove forest outside the tropics that were also coincidentally intersected by a major Category 5 hurricane. Airborne videography was flown to capture the landscape pattern and process of forest damage in relation to storm trajectory and circulation. Two aerial video transects, representing different topographic positions, were used to quantify forest damage from video frame analysis in relation to prevailing wind force, treefall direction, and forest height. A hurricane simulation model was applied to reconstruct wind fields corresponding to the ground location of each video frame and to correlate observed treefall and destruction patterns with wind speed and direction. Mangrove forests within the storm’s eyepath and in the right-side (forewind) quadrants suffered whole or partial blowdowns, while left-side (backwind) sites south of the eyewall zone incurred moderate canopy reduction and defoliation. Sites along the coastal transect sustained substantially more storm damage than sites along the inland transect which may be attributed to differences in stand exposure and/or stature. Observed treefall directions were shown to be non-random and associated with hurricane trajectory and simulated forewind azimuths. Wide-area sampling using airborne videography provided an efficient adjunct to limited ground observations and improved our spatial understanding of how hurricanes imprint landscape-scale patterns of disturbance.

BIOGEOGRAPHICAL ANALYSIS OF SCARABAEINAE AND GEOTRUPINAE ALONG A TRANSECT IN CENTRAL MEXICO (COLEOPTERA, SCARABAEOIDEA)

Scarabaeinae and Geotrupinae (Coleoptera, Scarabaeoidea) species composition is analyzed along a 150 km long altitudinal transect that runs S-NE in the Mexican Transition zone. The transect is located in the state of Hidalgo in central-eastern Mexico. The spatial unit of analysis is the landscape. The transect crosses five different landscapes. As terms of reference for studying the geographic distribution of the species, the entomofauna distribution patterns for the Mexican Transition zone were used. The transect includes all the patterns established by Halffter for this zone. Only genera with northern origins were found in landscape of the Pachuca Sierra (mountain range). The two landscapes of the High Plateau (temperate and arid) have one genus with a northern origin (<em>Onthophagus</em>), along with species belonging to genera with Neotropical origins that evolved on the High Plateau. For the landscapes of the zacualtipán Sierra and the slope down to the Gulf–Las Huastecas region genera of Neotropical affinity dominate, and there are also some species with a tropical distribution and of northern-Old World origin. The relationship between the mountains and the phyletic lineages or genera of northern origin and of recent entry into the Mexican Transition zone is confirmed, as is that between the tropical lowlands and the Neotropical lines or genera, also recent arrivals. Taxa that arrived a long time ago, of either origin, do not exhibit this geographic-ecological dependence. The Hidalgo Transect is compared with two other, similar transects sampled in the Mexican Transition zone: the Cofre de Perote–Gulf Coast transect (Veracruz) and that of Manantlán (Jalisco). In the mountain landscapes, High Plateau and Tropical Lowlands, there were no important differences in the species composition of the groups studied. In contrast, in the Transition landscape (zacualtipán in the Hidalgo Transect) there were very notable differences. In the Cofre de Perote transect, an important functional group is missing from the treeless habitats: the roller Scarabaeinae. For the same landscape, in Manantlán, lineages with Neotropical affinities are represented by a single species which completely dominates the beetles of northern affinities. This contrasts markedly with the Hidalgo and Cofre de Perote transects where, in the Transition landscape, Neotropical taxa are well represented. It appears that, unlike the tropical lowlands where (geologically recent) penetration of Neotropical taxa is massive in all three transects, in the transition landscapes (originally covered by cloud forest) the penetration of Neotropical taxa is highly variable, and depends on the mountain range in which they are found. In the Conclusions section, we analyze how the beetle fauna with different distribution patterns have contributed to the composition of the fauna of the Hidalgo Transect and in general that of the Mexican Transition zone, resulting in a mixture (genera with northern-Old World affinity, and genera with Neotropical affinities) that give the Mexican Transition zone its unique character.

Dry atmospheric deposition rates of metals along a coastal transect in southern California

While recent studies indicate atmospheric deposition is a significant source of metals to the Santa Monica Bay and coastal river systems of the Los Angeles area, the spatial extent of the atmospheric source along the entire southern California coast has not been measured in 30 years. This study provides measurements of dry atmospheric deposition of chromium, copper, lead, nickel and zinc at eight sites located along the coast between Santa Barbara and San Diego, and compares these data to historic measurements from the 1970s. Median dry deposition fluxes across sites ranged between 0.23 and 3.6 (chromium), 0.21 and 5.4 (nickel), 0.52 and 14 (lead), 0.89 and 29 (copper), and 4.8 and 160 (zinc) μg m −2 day −1. Differences in metal dry deposition rates observed between sites were dominated by proximity to urban areas and/or other nearby sources, with the highest metal fluxes observed near the Los Angeles Harbor (LAH) and San Diego Bay (SDB) sites. Compared with data from the 1970s, lead fluxes were typically one to two orders of magnitude lower in the present study (2006), indicating atmospheric sources of this metal have decreased over the past three decades in southern California. Chromium fluxes were also lower in 2006 compared with the 1970s, although to a lesser extent than for lead. In contrast, copper and zinc fluxes were typically within the same order of magnitude between the two time periods, with some higher measurements observed in 2006 compared with the 1970s at the LAH and SDB sites. This result indicates atmospheric sources of copper and zinc have not decreased over the past three decades in southern California, and have increased near our harbor/urban sites. Differences in sampling conditions (e.g., Santa Ana winds) and measurement techniques may also explain, in part, the differences observed in metal flux rates for these time periods. However, these limitations were most important for those metals with the smallest difference in flux rates measured in the 1970s vs. 2006 (e.g., chromium).

Transcontinental tidal transect: European Atlantic coast-Southern Siberia-Russian Pacific coast

The paper presents results of measurements with digital tidal LaCoste-Romberg gravimeters on the European Atlantic coast-Southern Siberia-Russian Pacific coast transect in 1995–2005. The transect includes four West European (Chize, Menesplet, Mordelles, and Wikle), two South Siberian (Klyuchi and Talaya), and two Far Eastern (Zabakalskoe and Yuzhno-Sakhalinsk) stations. Gravimetric measurements at the Talaya station (SW Baikal rift zone) are supplemented by long-term laser extensometer observations. The position of the stations within the rectangle (45°–55°N, 0.4°–142°E) allows one to assess existing tidal strain models (WD93 and DDW99) and various ocean tide models (SCW80, CSR3, FES95, ORI96, CSR4, FES02, GOT00, NAO99, and TPX06). Data of intracontinental stations (with a small ocean effect at distances of 2000–3000 km) agree well with the DDW99 tidal strain model (with regard to the mantle viscosity). The uncertainty of digital tidal gravity measurements is 0.25%. Results of laser extensometer measurements are at the same accuracy level. Then, the Love and Shida numbers calculated at midlatitudes of the intracontinental zone of Eurasia from combined data are h = 0.6077 ± 0.0008, k = 0.3014 ± 0.0001, and l = 0.0839 ± 0.0001. The analysis of results of Pacific and Atlantic stations located at distances of 30–300 km from the ocean showed that the FES02, CSR4, GOT00, NAO99, and TPX06 ocean tide models are preferable.

Empirical models for describing recent sedimentation rates in lakes distributed across broad spatial scales

Over the last 20 years there has been a surge of interest in paleolimnology and as a result a large accumulation of lake sedimentation records. This emerging archive has allowed us to develop empirical models to describe which variables explain significant variation in sedimentation rates over the past ∼150 years across large spatial scales. We hypothesized that latitude would be a significant explanatory variable of profundal zone lake sedimentation rates across a temperate to polar gradient. We further hypothesized that along a more longitudinally-constrained dataset (i.e. east coast of North America), latitude would explain a greater proportion of the variance. To test these hypotheses, we collated data from 125 natural, average-sized lakes (with surface area <500 km2) by recording authors’ estimates of sedimentation rates (measured as mm/year) or by digitizing recent sediment profiles and calculating sedimentation rates over the past ∼150 years. We found that, at both scales, latitude was the strongest predictor of lake sedimentation rates (full dataset: r2 = 0.28, P = 0.001, n = 125; east coast dataset: r2 = 0.58, P < 0.001, n = 43). By conducting a multiple linear regression analysis, we found that 70% of the variance in sedimentation rates from the east coast transect was explained by latitude and elevation alone. This latter model is of sufficient strength that it is a robust predictive tool. Given that climate and land-use strongly co-vary with latitude and that both of these factors have previously been shown to influence lake sedimentation rates, it appears that latitude is a surrogate measure for climate and land-use changes. We also show support for land-use as an important variable influencing sedimentation rates by demonstrating large increases in recent versus Holocene accumulation rates. These results indicate that it is possible to make generalizations about sedimentation rates across broad spatial scales with even limited geographic data.

Cumulative rainfall collectors – A tool for assessing groundwater recharge

The great majority of Southern African aquifers depend on rainfall for their recharge. The accurate estimation of recharge remains one of the biggest challenges for groundwater investigators. Accurate recharge estimations are needed for proper groundwater management as this governs the estimation of sustainable exploitation. Current estimates of recharge to aquifers range between 0.2 and 3% of annual rainfall for the drier Karoo and Kalahari areas and up to 20% for the winter rainfall region of the Western Cape. Important input for determining recharge is knowledge of the chemical and isotopic composition of rainfall. This paper describes a simple, low-cost and low-maintenance tool, the cumulative rainfall collector (CRC), which provides a cumulative sample of rainfall which is unaffected by evaporation. The instrument is capable of collecting rainfall over periods of up to one year. The crucial aspect is to store sufficient rainfall, to eliminate evaporation by covering the water sample with silicon oil and to reduce interference by birds. CRCs were installed at Struisbaai, the West Coast and the South Coast of the Western Cape Province. CRC data for Struisbaai indicate that recharge to the Table Mountain Group (TMG) Aquifer is 17.4% of mean annual rainfall. The West Coast transect includes two production wellfields. CRC data indicate that recharge is 9.7% to 13.5% for the Bredasdorp Formation of the Langebaan Road Wellfield. At Agter Witzenberg recharge estimations range from 24% to 46% to the Nardouw Formation of the TMG. The South Coast transect encompasses the Klein Karoo Rural Water Supply Scheme and CRC data indicate that recharge to the Peninsula Formation of the TMG is 5%. Water SA Vol.31 (3) 2005: pp.283-290

Marine invasive species: validation of citizen science and implications for national monitoring networks

Approximately 1,000 volunteers assessed the presence of invasive (Carcinus maenas and Hemigrapsus sanguineus) and native crabs within the intertidal zone of seven coastal states of the US, from New Jersey to Maine. Identification of crab species and determination of the gender of the observed crabs was documented at all 52 sites across a 725-km coastal transect. Using quantitative measures of accuracy of data collected by citizen scientists, a significant predictor of a volunteer’s ability was determined and eligibility criteria were set. Students in grade three and seven had the ability to differentiate between species of crabs with over 80% and 95% accuracy, respectively. Determination of gender of the crabs was more challenging and accuracy exceeded 80% for seventh grade students, while 95% accuracy was found for students with at least 2 years of university education. We used the data collected by citizen scientists to create a large-scale standardized database of the distribution and abundance of the native and invasive crabs. Hemigrapsus sanguineus dominated the rocky intertidal zone from Sandy Hook, New Jersey to Boston Harbor, Massachusetts while C. maenas dominated the northern extent of the sampled coastline. A citizen scientist of this monitoring network detected a range expansion of H. sanguineus. We identified obstacles to creating a national monitoring network and proposed recommendations that addressed these issues.

Strength and spatial patterns of the Holocene wintertime westerlies in the NE Atlantic region

Two records of July temperature and two records of reconstructed winter precipitation along the western coast of Norway have been combined to examine regional patterns in glacier activity and winter precipitation during the Holocene. The maritime glaciers in western Norway are mainly controlled by winter precipitation. Hence, fluctuations in magnitude and equilibrium-line altitude (ELA) of these glaciers reflect variability in wintertime atmospheric circulation patterns in the northeast Atlantic region. By combining an independent proxy for summer temperature with reconstructed ELAs during the Holocene, it is possible to reconstruct former winter precipitation. We track the dominant position of the westerlies during the Holocene by comparing records of winter precipitation along a 2000 km south–north coastal transect in Norway. Analyses of modern data on the evolution of the polar vortex indicate that there is a strong relationship between polar vortex and storm-track variability over the North Atlantic. Periods with increased winter precipitation along the coast of Norway are associated with a stronger effect of the westerlies, where differences in the distribution of precipitation are assumed to reflect changes in the position of the westerlies. The largest precipitation anomalies caused by a dominant southerly position of the westerlies are found around 2.8, 1.2 and 0.4 ka yrs BP. However, a general humid phase prevailed between 2.3 and 0.9 ka yrs BP.

A coastal transect of McMurdo Dry Valleys (Antarctica) snow and firn: marine and terrestrial influences on glaciochemistry

Samples of snow and firn from accumulation zones on Clark, Commonwealth, Blue and Victoria Upper Glaciers in the McMurdo Dry Valleys (∼77–78º S, 161–164º E), Antarctica, are evaluated chemically and isotopically to determine the relative importance of local (site-specific) factors vs regional-scale influences in defining glaciochemistry. Spatial variation in snow and firn chemistry confirms documented trends within individual valleys regarding major-ion deposition relative to elevation and to distance from the coast. Sodium and methylsulfonate (MS–), for example, follow a decreasing gradient with distance from the coast along the axis of Victoria Valley (350–119 µg L−1 for Na+; 33–14 µg L−1 for MS–); a similar pattern exists between Commonwealth and Newall Glaciers in the Asgaard Range. When comparing major-ion concentrations (e.g. Na+, MS−, Ca2+) or trace metals (e.g. Al, Fe) among different valleys, however, site-specific exposures to marine and local terrestrial chemical sources play a dominant role. Because chemical signals at all sites respond to particulates with varying mixtures of marine and terrestrial sources, each of these influences on site glaciochemistry must be considered when drawing temporal climate inferences on regional scales.

A Rigorous Assessment of the Avifauna of a Small Caribbean Island: A Case Study in Anegada, British Virgin Islands

The avifauna of the British Virgin Islands (BVI) has received little attention from researchers. The lack of baseline information is therefore a major hindrance to the construction of management plans. Here we present detailed monitoring data on the species composition and numbers of each species for the island of Anegada, BVI. We surveyed the birds of Anegada between November 2003 and March 2005 utilising a combination of coastal transects, wetland bird counts, point counts, and species-specific survey methods for nocturnal species. A total of 99 different species were recorded, with a large increase in the number of species and number of individuals centred around peak migration in September. Although there is a depauperate terrestrial bird community consisting of predominately generalist species, it holds important populations of regional avifauna. For example, it hosts five regionally important breeding seabird colonies and its wetlands provide an important stop-over and over-wintering site for many species of shorebirds and waterbirds. In addition, the Eastern salt ponds are also the only breeding site for the greater flamingo, Phoenicopterus ruber, within the territory. We discuss our findings within the current framework of regional conservation and provide recommendations for the implementation of a territory wide monitoring program as a first step towards meeting the UK's commitments under several multilateral environmental agreements.

Patterns of genetic differentiation in Thamnophis and Taricha from the Pacific Northwest

AbstractAim The co‐evolutionary interaction between the common garter snake, Thamnophis sirtalis, and the rough‐skinned newt, Taricha granulosa, takes place throughout much of the Pacific Northwest (North America). The biogeography of the Pacific Northwest has been heavily influenced by the last Pleistocene glaciation, which reached a maximum as late as 14,000 yr bp. We researched: (1) what type of population structure is present for garter snakes and newts, (2) whether the population structure of these species is consistent with a Pleistocene glaciation hypothesis, and (3) how population structure and migration possibly affect co‐evolution between these species.Location The Pacific Northwest of North America, specifically northern California, Oregon and Washington in the USA.Methods We sampled approximately 20 populations for each species from three different transects. Using microsatellite markers and tissue samples from both species, we quantified the population structure for both species. Individual‐based assignment tests were used to estimate contemporary migration rates.Results Both Th. sirtalis and Ta. granulosa exhibited little genetic differentiation among our study sites, even among those separated by large distances. Significant population structure was detected on multiple geographic scales. Differences in population structure were observed among transects and between garter snake and newt transects. Contemporary migration rate estimates indicate high levels of genetic exchange between populations.Main conclusions Prior to this study, little was known about the fine‐scale population structure of either species in this region. Patterns of population structure for garter snakes and newts reflect a shared biogeographical history affected by the Pleistocene glaciation in the Pacific Northwest. Both species apparently migrate frequently between populations, thus potentially retarding the process of adaptive co‐evolution. We find that populations from a northern coastal transect (Washington) are most likely to be locally adapted.

A network for monitoring terrestrial ecosystems along a latitudinal gradient in Continental Antarctica

A network for monitoring change in the vegetation communities to assess the impact of future climate changes was established in Victoria Land (Continental Antarctica) in 2002 and 2003. The network is within the framework of the SCAR project RiSCC (Regional Sensitivity to Climate Change in Antarctic terrestrial and limnetic ecosystems), and in cooperation with LGP (Latitudinal Gradient Project) assessing how ecosystem biodiversity and structure may change with latitude and with climate change. The network is composed of 19 permanent plots at nine sites along a latitudinal gradient from Apostrophe Island (73°30′S, 167°50′E) to Granite Harbour (77°00′S, 162°26′E), with a main coastal transect and three subtransects inland from the coast. The sites are representative of the most frequent environmental conditions and the most widespread communities occurring in Continental Antarctica and in Victoria Land. The selected communities show different ecological requirements and have different potential sensitivities to climate change. The vegetation of each plot was described using the RiSCC research protocol, developed originally in the Maritime Antarctic and here adapted, for plot size, to Continental Antarctica. This paper characterizes the vegetation at the sites as the starting point of the long term monitoring.

Geological history and within‐island diversity: a debris avalanche and the Tenerife lizard Gallotia galloti

Several processes have been described that could explain geographical variation and speciation within small islands, including fragmentation of populations through volcanic eruptions. Massive landslides, or debris avalanches, could cause similar effects. Here we analyse the potential impact of the 0.8 million-year-ago (Ma) Güimar valley debris avalanche on the phylogeography of the lizard Gallotia galloti on the Canary Island of Tenerife. Distributions of mitochondrial DNA lineages (based on cytochrome b sequences) were analysed on a 60-km southeastern coast transect centred on this area. Three main clades were detected, which can be divided into northern (one clade) and southern (two clades) groups that introgress across the valley. Maximum-likelihood estimates of migration rates (scaled for mutation rate) revealed highly asymmetric patterns, indicating that long-term gene flow into this region from both the northern and the southern populations greatly exceeded that in the opposite directions, consistent with recolonization of the area. The ancestral Tenerife node on the G. galloti tree is estimated at 0.80 Ma, matching closely with the geological estimate for the debris avalanche. Morphological variation (body dimensions and scalation) was also analysed and indicated a stepped cline in female scalation across the valley, although the patterns for male scalation and male and female body dimensions were not as clear. Together these findings provide support for the hypothesis that the debris avalanche has shaped the phylogeography of G. galloti and may even have been a primary cause of the within-island cladogenesis through population fragmentation and isolation. Current estimates of timing of island unification mean that the original hypothesis that within-island diversity is explained by the secondary contact of populations from the two ancient precursor islands of Teno and Anaga is less plausible for this and some other Tenerife species. Large-scale landslides have occurred on many volcanic islands, and so may have been instrumental in shaping within-island diversities.

Granulometric characterization and evaluation of annually banded mid-Holocene estuarine silts, Welsh Severn Estuary (UK): coastal change, sea level and climate

Holocene silts (salt marshes) and highest intertidal–supratidal peats are superbly exposed on a 15 km coastal transect which reveals two laterally extensive units of annually banded silts (Beds 3, 7) associated with three transgressive–regressive silt–peat cycles (early sixth–early fourth millennium BC). Bed 3 in places is concordantly and gradationally related to peats above and below, but in others transgresses older strata. Bed 7 also grades up into peat, but everywhere overlies a discordance. The banding in Bed 3 at three main and two minor sites was resolved and characterized texturally at high-resolution (2.5/5 mm contiguous slices) using laser granulometry (LS230 with PIDS) and a comprehensive scheme of data-assessment. Most of Bed 3 formed very rapidly, at peak values of several tens of millimetres annually, in accordance with modelled effects of sea-level fluctuations on mature marshes (bed concordant and gradational) and on marshes growing up after coastal erosion and retreat (bed with discordant base). Using data from the modern Severn Estuary, the textural contrast within bands, and its variation between bands, points to a variable but overall milder mid-Holocene climate than today. The inter-annual variability affected marsh dynamics, as shown by the behaviour of the finely divided plant tissues present. Given local calibration, the methodology is applicable to other tidal systems with banded silts in Britain and mainland northwest Europe.

BIOTIC RESISTANCE TO INVASION: NATIVE PREDATOR LIMITS ABUNDANCE AND DISTRIBUTION OF AN INTRODUCED CRAB

Introduced species frequently escape the natural enemies (predators, com- petitors, and parasites) that limit their distribution and abundance in the native range. This reduction in native predators, competitors, and parasites may result in ecological release in the introduced range. However, biological interactions also can limit the establishment and spread of nonnative populations. The extent to which such biotic resistance occurs is poorly resolved, especially for marine ecosystems. Here we test whether a native predator, the blue crab Callinectes sapidus, affects the abundance and geographic range of the in- troduced European green crab Carcinus maenasin eastern North America. Both crab species occur in shallow, soft-sediment habitats of bays and estuaries, and their ranges overlap in eastern North America. First, we tested for a negative relationship in the abundances of the two species from trap samples across a 640-km (5.788 latitude) coastal transect. Second, we estimated variation in predation pressure on tethered Carcinus maenas across latitude and as a function of Callinectes sapidus abundance. Third, we measured predation rates on Carcinus maenasby Callinectes sapidusin field and laboratory experiments. Our results support the hypothesis that the native predator Callinectes sapidusprovides biotic resistance to invasion and prevents the southward spread and establishment of Carcinus maenas. Within and across bays, Carcinus maenas were significantly less abundant at sites and depths with Callinectes sapiduscompared with areas lacking Callinectes sapidus. Moreover, no Carcinus maenaswere found in Chesapeake Bay, where Callinectes sapidus were most abundant. Predation of tethered Carcinus maenasincreased with Callinectes sapidusabun- dance. In laboratory and field experiments,Callinectes sapidus preyed readily on Carcinus maenas. Thus, we conclude the predation by Callinectes sapidus, alone or in combination with other factors, limits the abundance and geographic range of an invasive marine species.

Estimating palaeobathymetry of wave‐graded continental shelves from sediment texture

AbstractThe concept of the wave‐graded continental shelf, with sea floor sediment coarsening from offshore mud to shoreface sand, has been well known from the time of Johnson (1919). Although most of the modern shelf shows textures unrelated to water depth on account of relict features or sediment starvation, the geological record is more likely to preserve sites where sediment is being fed to a subsiding inner‐shelf. These consistently show the landward‐coarsening pattern of the wave‐graded shelf, recording past water depth history in accumulated sea floor sediment. The landward‐coarsening pattern is driven primarily by wave‐induced bed shear stress, which increases shoreward exponentially, although it also varies from place to place with wave climate, and can be influenced by sediment concentration and currents. In this study, the relationship between bed shear stress, sediment texture and water depth has been investigated by comparing per cent mud and wave climate data from shore‐normal transects of three modern wave‐graded coastal settings: Wellington Harbour (low energy) and the Manawatu coast (moderate energy) in New Zealand, and Monterey Bay in California (moderate–high energy). Samples from all three locations show a progressive change from poorly sorted mud offshore to well‐sorted fine sand nearshore, with the sand–mud transition ranging from 3 m (low energy) to 50 m (moderate–high energy), reflecting differences in average bed shear. Repeat measurements of per cent mud on seasonal, annual and decadal time scales along a Manawatu coastal transect showed no measurable change, demonstrating equilibrium between sediment supply, wave energy, water depth and sediment texture. A simple model based on the relationship between wave climate, shear stress and per cent mud, and using data and conditions from the modern Manawatu coast, is applied to two mid‐Pliocene cyclothems exposed 50 km inland, giving results comparable with estimates from foraminifera and the deep‐sea isotope record. Per cent mud offers more detail for palaeobathymetric trends in shallow water shelf strata than other proxy depth recorders, although it is limited to depths above wave base and requires an independent estimate of wave climate if depths are to be quantified.

Dissolved gas measurements in oceanic waters made by membrane inlet mass spectrometry

A method is presented for the shipboard analysis of dissolved gases (O2, CO2, Ar, N2, H2S, dimethylsulfide) in oceanic waters using membrane inlet mass spectrometry (MIMS). Gases are extracted from seawater across a semipermeable membrane into the ion source of the mass spectrometer. The method can be used to simultaneously measure both major and trace gases in seawater samples in near real-time. In the case of DMS, low nmol L−1 detection limits can be achieved without any concentration step. Multiple calibration and method comparison exercises conducted in the subarctic Pacific Ocean show that the MIMS method provides gas measurements that are consistent with those obtained by standard techniques, with precision of replicate samples ranging from less than 1% to approximately 5% coefficient of variation (CV). To illustrate the usefulness of the MIMS approach, depth profiles are presented for O2, CO2, N2, and DMS at various coastal and open ocean stations in the subarctic Pacific. In addition to these discrete gas measurements, the MIMS system has also been used to continuously monitor gas concentrations along underway transects. High frequency gas measurements of O2, CO2, and DMS made along two coastal transects reveal a high degree of spatial and temporal variability in gas concentrations, likely resulting from the interplay of various biological, chemical, and physical forcings. The underway MIMS data provide insight into the biogeochemical controls on gas cycling in dynamic marine waters.

Molecular and morphological analysis of secondary contact zones of Cottus gobio in Fennoscandia: geographical discordance of character transitions

Northern Europe was postglacially colonized from different directions by distinct phylogeographical lineages of the bullhead Cottus gobio L. (Pisces: Scorpaeniformes). These lineages have then come into contact in coastal habitats of the currently brackish Baltic Sea and in the freshwaters north of it. We studied the patterns of intergradation in the contact zones in four morphometric and six molecular characters. In the north, intergradation between the western (W) and eastern (E) bullhead lineages is found both among rivers (west-to-east) and along individual rivers (south-to-north). The locations of the transition zones probably relate to the timing of the initial contact, subsequent Baltic shoreline displacement (i.e. emergence of the lower river reaches), and dispersal barriers caused by variations of coastal salinity. The transitions (clines) in different characters are, however, not geographically coincident. Mitochondrial DNA clines are generally found upstream and to the east of the other transitions, and GPI-1 allozyme clines are mostly shifted downstream in the rivers, and west of the other transitions on the broader scale of the Baltic Sea. The location of the mtDNA clines may best reflect the initial contact between lineages, and the displacement of the other clines could result from dispersal being overall asymmetric (predominantly downstream) and sex-biased (stronger in males). Alternatively, the non-coincidence might reflect selection against deleterious cytonuclear character combinations. No clear evidence of reproductive incompatibility between the lineages was seen in local population structures; no remaining genetic correlations were observed locally among traits. In another transition area, a coastal transect in southern Finland, clinal patterns similar to those in the northern contact zone were recorded, but the population compositions could not be explained by simple in situ mixing of any of the putatively pure, invading refugial lineages. Probably, the bullhead stocks that initially came into contact in this southern study area already represented mixtures of the invading lineages. © 2004 The Linnean Society of London, Biological Journal of the Linnean Society, 2004, 81, 535–552.

Quantitative assessment of picoeukaryotes in the natural environment by using taxon-specific oligonucleotide probes in association with tyramide signal amplification-fluorescence in situ hybridization and flow cytometry.

Picoeukaryotes (cells of <3 micro m in diameter) contribute significantly to marine plankton biomass and productivity, and recently molecular studies have brought to light their wide diversity. Among the methods that have been used so far to quantify aquatic microorganisms, fluorescence in situ hybridization of oligonucleotide probes combined with flow cytometry offers the advantages of both high resolution for taxonomic identification and automated cell counting. However, cell losses, cell clumps, and low signal-to-background ratio have often been mentioned as major problems for routine application of this combination of techniques. We developed a new protocol associating tyramide signal amplification-fluorescence in situ hybridization and flow cytometry, which allows the detection of picoeukaryotes in cultures during both the exponential and stationary phases. The use of surfactant and sonication proved to be essential for the detection and quantification of picoeukaryotes from the natural environment, with as little as a few tenths of a milliliter of 3- micro m-pore-size prefiltered sea water. The routine application of the technique was tested along a coastal transect off Brittany (France), where the different groups of picoeukaryotes were investigated using already published specific probes and a newly designed probe that targets the order Mamiellales (Prasinophyceae, Chlorophyta). Among the picoeukaryotes, Mamiellales outnumbered by 1 order of magnitude both the cyanobacteria and the non-Chlorophyta, which were represented mainly by the Pelagophyceae class. Picoeukaryote abundance increased from open toward more estuarine water, probably following changes in water temperature and stability.