Coastal Sinkholes Research Articles

Coastal Storm-Induced Sinkholes: Insights from Unmanned Aerial Vehicle Monitoring

In recent decades, the scientific community has increasingly focused on extreme events linked to climate change, which are leading to more intense and frequent natural disasters. The Mediterranean can be considered a hotspot where the effects of these changes are expected to be more intense compared to other regions of the planet. Italy is not exempt; in fact, with its extensive shoreline, it is particularly vulnerable, especially to high sea levels and coastal erosions. In this framework, from late October to early November 2023, six storm surges occurred in the Gulf of Trieste (NE Italy). These events, characterized by winds from 190°N to 220°N and the significant wave height, which reached up to 1.81 m nearshore—an uncommon meteorological condition in the northern Adriatic Sea—caused the occurrence of eight coastal sinkholes and substantial damages to man-made structures. Thanks to Unmanned Aerial Vehicles (UAVs) and their derived products (high-resolution orthomosaics, Digital Elevation Models—DEMs, and point clouds), it was possible to study these features over time, enabling long-term coastal dynamics monitoring, which can be crucial for timely and effective response and restoration efforts.

Biosynthetic potential of the sediment microbial subcommunities of an unexplored karst ecosystem and its ecological implications.

Microbial communities from various environments have been studied in the quest for new natural products with a broad range of applications in medicine and biotechnology. We employed an enrichment method and genome mining tools to examine the biosynthetic potential of microbial communities in the sediments of a coastal sinkhole within the karst ecosystem of the Yucatán Peninsula, Mexico. Our investigation led to the detection of 203 biosynthetic gene clusters (BGCs)and 55 secondary metabolites (SMs)within 35 high-quality metagenome-assembled genomes (MAGs)derived from these subcommunities. The most abundant types of BGCs were Terpene, Nonribosomal peptide-synthetase, and Type III polyketide synthase. Some of the in silico identified BGCs and SMs have been previously reported to exhibit biological activities against pathogenic bacteria and fungi. Others could play significant roles in the sinkhole ecosystem, such as iron solubilization and osmotic stress protection. Interestingly, 75% of the BGCs showed no sequence homology with bacterial BGCs previously reported in the MiBIG database. This suggests that the microbial communities in this environment could be an untapped source of genes encoding novel specialized compounds. The majority of the BGCs were identified in pathways found in the genus Virgibacillus, followed by Sporosarcina, Siminovitchia, Rhodococcus, and Halomonas. The latter, along with Paraclostridium and Lysinibacillus, had the highest number of identified BGC types. This study offers fresh insights into the potential ecological role of SMs from sediment microbial communities in an unexplored environment, underscoring their value as a source of novel natural products.

Changes in the sediment microbial community structure of coastal and inland sinkholes of a karst ecosystem from the Yucatan peninsula

The karst underground river ecosystem of Yucatan peninsula is composed of cave systems and sinkholes. The microbial diversity of water from this underground river has been studied, but, structure of the microbial community in its cave sediments remained largely unknown. Here we describe how the microbial community structure of these sediments changes due to different environmental conditions found in sediment zones along the caves of a coastal and an inland sinkhole. We found that dominant microbial groups varied according to the type of sinkhole (Coastal: Chloroflexi and Crenarchaeota; inland: Methylomirabilota and Acidobacteriota) and that the community structures differed both among sinkhole types, and within the sediment zones that were studied. These microorganisms are associated with different types of metabolism, and differed from a microbial community dominated by sulfate reducers at the coastal sinkhole, to one dominated by methylotrophs at the inland sinkhole, suggesting there are biogeochemical processes in the coastal and inland sinkholes that lead to changes in the microbial composition of the underground river ecosystem’s sediments. Our results suggest sediments from unexplored sinkhole caves are unique environmental niches with distinct microbial assemblages that putatively play an important role in the biogeochemical cycles of these ecosystems.

Hydroclimate Dipole Drives Multi‐Centennial Variability in the Western Tropical North Atlantic Margin During the Middle and Late Holocene

AbstractMeridional shifts of the North Atlantic Subtropical High (NASH) western edge create a dipole that drives hydroclimate variability in the southeastern United States and Caribbean region. Southwest displacements suppress rainfall in the southern Caribbean. Northwest displacements drive southeast United States and northern Caribbean drying. Projections for the 21st century suggest a more meridionally displaced NASH, which jeopardizes Caribbean island communities dependent on rain‐fed aquifers. While recent work indicates that Atlantic and Pacific Ocean‐atmosphere variability influenced the NASH during the instrumental period, little is known about NASH behavior and subsequent hydroclimate responses over longer timescales. To address this limitation, we developed a ∼6000‐years long rainfall record through the analysis of calcite raft deposits archived within sediments from a coastal sinkhole in the northeast Bahamas (Abaco Island). Increased (decreased) calcite raft deposition provides evidence for increased (decreased) rainfall driven by NASH variability. We use simulations from the Community Earth System Model to support this interpretation. These simulations improve our understanding of NASH behavior on timescales congruous with the reconstruction and suggest an important role for the state of the Pacific Ocean. Furthermore, model simulations and a compilation of regional hydroclimate reconstructions reveal that the NASH‐driven dipole dominates northern and southern Caribbean rainfall on centennial timescales. These results bring Holocene Caribbean hydroclimate variability into sharper focus while providing important context for present and future changes to regional climate. Additionally, this study highlights the need for improved future predictions of the state of the Pacific Ocean to best inform water scarcity mitigation strategies for at‐risk Caribbean communities.

Investigation of sedimentary records of Hurricane Irma in sinkholes, Big Pine Key, Florida

Few paleotempestological studies have focused on coastal sinkholes, a common feature in Florida, which can receive and preserve storm overwash sediments. The major goal of this research is to improve our understanding of the characteristic signatures of storm sediments in sinkholes thereby determining reliability of these environments as proxies for hurricanes. Hurricane Irma as a category 5 storm provides an excellent case study for characterizing storm deposits in sinkholes on Big Pine Key. We cored at four sinkholes along a 350 m transect normal to the shoreline. Core sediments were characterized using physical description, short-lived radioisotope dating, sediment grain size analysis, loss-on-ignition, microfossil analysis, and x-ray fluorescence elemental analysis. We found that Irma deposits had higher abundances of marine foraminifera, less total organic matter and elevated Si/Al and Ca/Ti ratios, compared to pre- or post-Irma sediments. In addition, there was a thinning of the storm sediments along the inland transect. Consequently, we propose that sinkholes, particularly those that are closer to the shoreline, can provide reliable sites for paleotempestology studies.

Plant wax evidence for precipitation and vegetation change from a coastal sinkhole lake in the Bahamas spanning the last 3000 years

Plant wax hydrogen isotopic composition is commonly used to reconstruct the hydrogen isotopic composition of precipitation used by terrestrial vegetation. However, mangroves growing in coastal environments take up a mixture of freshwater and seawater. Biosynthetic fractionation (between source water and plant wax) differs between plant types and as a function of salinity, potentially complicating interpretations of past precipitation in coastal environments. In order to reconstruct Holocene hydrologic and ecologic changes archived within sediments from Blackwood Sinkhole on Abaco Island in The Bahamas, we adopt a multi-proxy approach using plant wax hydrogen isotopic composition (δ2H) to reconstruct paleohydrology, together with plant wax carbon isotopic composition (δ13Cwax), sterol biomarkers and pollen abundances to identify vegetation change. When pollen indicates a stable terrestrial plant community (2950–850 cal yrs BP), variations of δ2H values measured on the plant wax C28n-alkanoic acid are interpreted in terms of precipitation isotope (δ2Hprecip) changes, with 2H-depletion from 2950 to ∼2100 cal yrs BP and ∼1700 to 1000 cal yrs BP. However, interpretation is complicated at 850 cal yrs BP, when δ2H values decrease (−50‰) concurrent with increased Laguncularia racemosa (white mangrove) and Conocarpus erectus (buttonwood mangrove), and the mangrove-derived biomarker, taraxerol. We develop a pollen-based correction for mangrove inputs, yielding reconstructed precipitation isotope estimates (δ2Hprecip-corr). Low δ2Hprecip-corr values are synchronous with increased abundance of pine pollen, both of which may indicate wetter conditions from 850 cal yrs BP to present. This study provides additional evidence that mangroves can complicate hydrologic reconstructions from n-alkyl terrestrial plant wax biomarkers, and that such complication can be removed by pollen-based correction. After correcting for mangrove inputs, we obtain estimates of δ2Hprecip-corr from −33 to +25‰ throughout the last 2950 years, with uncertainties on the order of 10–20‰.

Limnological characteristics, community metabolism and management strategies of a coastal sinkhole in Cuba (Cenote Jennifer)

The Cenote Jennifer is an important and unique aquatic sinkhole in Cayo Coco (Jardines del Rey Tourist Destination) that has brackish to saline water. Two samplings were made in 1998 and 2009, and 4 metabolism community experiments in 2009. Some limnological parameters were measured in both samplings (temperature, salinity, pH, dissolved oxygen major ions, hydrogen sulfide, nutrients and others). Community metabolism was measured through incubated oxygen concentration in clear and dark oxygen bottles. Results showed that the sinkhole limnology depends on rainfall and light incidence year, with some stratification episodes, due to halocline or oxycline presence, rather than thermocline. The sinkhole water was oligotrophic (total nitrogen of 41.5 ± 22.2 μmol l−1 and total phosphorus of 0.3 ± 0.2 μmol l−1) and with low productivity (gross primary productivity of 63.0 mg C m−2 d−1). Anoxia and hypoxia were present at the bottom with higher levels of hydrogen sulfide, lower pH and restricted influence of the adjacent sea (2 km away). To protect the Cenote Jennifer, tourist exploitation should be avoided and more resources to ecological and morphological studies should be allocated, and eventually use this aquatic system only for specialized diving. For conservation purposes, illegal garbage disposal in the surrounding forest should end.

Three-dimensional inverse modeling of EM-LIN data for the exploration of coastal sinkholes in Quintana Roo, Mexico

Abstract. In the Yucatán Peninsula (YP), southern Mexico, cities and towns are settled on a platform of calcareous sedimentary sequence, where karst processes have formed numerous sinkholes, underground water conduits, and caverns. Anthropogenic activities there threaten the only source of freshwater supply, which is in a regional unconfined aquifer; there are no lakes or rivers on the surface. For the sustainable management of this resource in the YP, mathematical tools are needed in order to model groundwater. To determine the geometry of the aquifer, for example the positions of caves, sinkholes, and underground principal conduits, we modified a software to invert three-dimensional electromagnetic low-induction number (3-D EM-LIN) data for a set of profiles at arbitrary angles. In this study we used the EM-LIN geophysical method to explore the Chac-Mool sinkhole system in the state of Quintana Roo, Mexico. We performed inverse modeling in 3-D using the EM-34 instrument for vertical and horizontal magnetic dipoles. The 3-D inversion process yields models that enable us to correlate the path of the underground principal conduits with the subsurface electrical resistivity. In this work we show that inverse modeling of EM-LIN data can give us information about how close to surface the underground water conduits and the location of the boundary between fresh and salty water are.

Coastal paleokarst landforms: A morphometric approach via UAV for coastal management (Algarve, Portugal case study)

Karst landscapes display remarkable morphological diversity and raise challenging management questions. Understanding karst processes is particularly relevant to the management of densely populated rocky coastlines, since sea-level rise influences the erosion rate of potentially hazardous landforms (e.g. sinkholes). Appropriate management strategies are needed to mitigate against property loss and economic impacts on actively eroding karst. Coastal management in these areas should be based on accurate and reproducible measurements of karst features to better understand and predict their behaviour. Due to their inherent instability and frequent inaccessibility, detailed morphometric studies of exposed coastal sinkholes are limited. We demonstrate the utility of using an unmanned aerial vehicle (UAV) to provide rapid and accurate analysis of spatial data on a large density of sinkholes that would otherwise be inaccessible. UAV data were post-processed and analysed using geographical information (GIS) tools to characterize both individual sinkholes and their spatial distribution patterns.Our study was carried out on the rocky coast of the central Algarve (southern Portugal). As stated in many other previous works, sinkholes spatial distribution is mainly controlled by the network of fractures in the host rock that was also observed in our study area. In addition, the geometric properties and their differences between the studied sites are controlled by weathering processes and synoptic conditions.This research emphasises the geomorphic hazard associated with karst landscapes and reinforces the need to include knowledge about these landforms and their vulnerability to sea-level rise in integrated coastal management plans.

The intertropical convergence zone modulates intense hurricane strikes on the western North Atlantic margin.

Most Atlantic hurricanes form in the Main Development Region between 9°N to 20°N along the northern edge of the Intertropical Convergence Zone (ITCZ). Previous research has suggested that meridional shifts in the ITCZ position on geologic timescales can modulate hurricane activity, but continuous and long-term storm records are needed from multiple sites to assess this hypothesis. Here we present a 3000 year record of intense hurricane strikes in the northern Bahamas (Abaco Island) based on overwash deposits in a coastal sinkhole, which indicates that the ITCZ has likely helped modulate intense hurricane strikes on the western North Atlantic margin on millennial to centennial-scales. The new reconstruction closely matches a previous reconstruction from Puerto Rico, and documents a period of elevated intense hurricane activity on the western North Atlantic margin from 2500 to 1000 years ago when paleo precipitation proxies suggest that the ITCZ occupied a more northern position. Considering that anthropogenic warming is predicted to be focused in the northern hemisphere in the coming century, these results provide a prehistoric analog that an attendant northern ITCZ shift in the future may again return the western North Atlantic margin to an active hurricane interval.

Deep speleological salt contamination in Mediterranean karst aquifers: perspectives for water supply

On the Mediterranean coast, submarine karst springs are common. Most of them are brackish and various unsuccessful attempts in France, Greece, and Italy indicate that it is impossible to diminish the salinity at the spring. Based on studies on the shores of south-eastern France and in Kefalonia (Greece), we propose a working model that explains the mechanism of salt contamination. During the Messinian Deep Stage (−5.9 to 5.3 Ma), a substantial sea-level lowering in the Mediterranean allowed the existence of cave networks extending several hundreds of meters below the present sea level. Seawater is now sucked into the system through these caves. This mechanism is supported by a study of the Port Miou underground river (Cassis, France). In the Port Miou cave system, which extends to 250 m below sea level, titanium and heavy metals are present in the sediment. They are similar to those found in the Cassidaigne submarine canyon, which reinforces the hypothesis of a connection between the cave and the canyon. Recent geological studies prove a Messinian origin for the canyon and support the deep contamination model. The model is also supported by examples on Kefalonia Island (Greece) and in the Toix–Moraig system (Spain) where salt-water intrusions are observed in coastal sinkholes and sea caves. This model explains why various attempts to diminish the salinity of these brackish springs, through the construction of dams to increase head, have failed.

Late Holocene sedimentation and hydrologic development in a shallow coastal sinkhole on Great Abaco Island, The Bahamas

It remains poorly understood how sea level drives environmental change and hydrographic development in coastal karst basins (underwater caves, sinkholes, blueholes, etc.) over millennial timescales. It was previously hypothesized that coastal karst basins (CKBs) transition from vadose, to littoral, then anchialine, and finally submarine environments as sea-level rise inundates coastal karst landscapes, but the initial flooding event of CKBs remains challenging to sample. Runway Sinkhole hosts a modern anchialine ecosystem located ∼225 m from Great Abaco Island coastline in The Bahamas, and its shallow water depth (∼1.8 mbsl) permits an investigation into the early environmental evolution and hydrographic development in a CKBs after inundation by sea-level rise. Four sediment cores were collected from Runway Sinkhole, and late Holocene environmental change was reconstructed with benthic foraminiferal paleoecology, organic matter geochemistry (OM%, δ13Corg, and C:N), X-radiography, and radiocarbon dating. Despite some uncertainties associated with the chronology, it appears that Holocene sea-level rise initially flooded Runway Sinkhole and created a littoral environment at least by ∼3.9 ka, whereafter a detrital peat deposit accumulated in the sinkhole. This detrital peat had a high organic matter content (mean 88%), a δ13Corg value indicative of organic matter derived from C3 plants including mangroves (−28‰), and an unknown calcareous microfossil suggestive of a non-marine habitat in the sinkhole. A shift to carbonate sand deposition, organic matter with more marine-influenced δ13Corg values (−23‰), and expansion of euryhaline (Bolivina striatula, Elphidium poeyanum, and Triloculina bermudezi) and anchialine (Physalidia simplex and Conicospirillina exleyi) benthic foraminifera at ∼1.2 ka marks the onset of modern anchialine environmental conditions at the sediment–water interface (∼1.8 mbsl). These results suggest that relative sea-level rise in the Bahamas forced environmental change in Runway sinkhole at ∼1.2 ka, and indicate that peat deposits in coastal sinkholes must be verified as in-situ before being utilized as sea-level indicators.

Tropical cyclone wind speed constraints from resultant storm surge deposition: A 2500 year reconstruction of hurricane activity from St. Marks, FL

Recent work suggests that the patterns of intense (≥category 3 on the Saffir‐Simpson scale) hurricane strikes over the last few millennia might differ from that of overall hurricane activity during this period. Prior studies typically rely on assigning a threshold storm intensity required to produce a sedimentological overwash signal at a particular coastal site based on historical analogs. Here, we improve on this approach by presenting a new inverse‐model technique that constrains the most likely wind speeds required to transport the maximum grain size within resultant storm deposits. As a case study, the technique is applied to event layers observed in sediments collected from a coastal sinkhole in northwestern Florida. We find that (1) simulated wind speeds for modern deposits are consistent with the intensities for historical hurricanes affecting the site, (2) all deposits throughout the ∼2500 year record are capable of being produced by hurricanes, and (3) a period of increased intense hurricane frequency is observed between ∼1700 and ∼600 years B.P. and decreased intense storm frequency is observed from ∼2500 to ∼1700 and ∼600 years B.P. to the present. This is consistent with prior reconstructions from nearby sites. Changes in the frequency of intense hurricane strikes may be related to the degree of penetration of the Loop Current in the Gulf of Mexico.

Morphometric analysis of sinkholes in a karst coastal area of southern Apulia (Italy)

Salento, the southern portion of Apulia region (SE Italy), is a narrow and elongated peninsula in carbonate rocks, with prevailing low coastlines, locally interrupted by high rock cliffs. The long stretches of low coasts are marked by typical karst landforms consisting of collapse sinkholes. As observed in many other karst coastal settings worldwide, development of sinkholes may be particularly severe along the coasts, where both natural and anthropogenic processes contribute to accelerate the dissolution of carbonate rocks and subsidence processes, even influencing the coastline evolution. Following a previous study, where the main features of sinkholes at Torre Castiglione (Taranto province) were investigated and described, and a preliminary susceptibility map produced, at the light of updated data and elaborations in the present paper we perform a detailed morphometric analysis on the sample of identified sinkholes. The main morphometric parameters generally used for sinkhole characterization have been considered in this study: shape of the sinkhole, azimuth and length of maximum and minimum axes, depth, elongation ratio, and distance from the shorelines. Each of them is described, both as individual parameter and in conjunction with the others, in the attempt to identify the main factors controlling development of sinkholes in the area, and their evolution as well. With regard to this latter aspect, beside simple morphometry of the sample of sinkholes at Torre Castiglione, we also focused our attention on the likely relationships existing between distribution and shape of the sinkholes and the tectonic discontinuities. To investigate the matter, a three-stage analysis has been carried out in this study by means of: field measurements of the fractures bounding the sinkholes, field measurement of the long axes azimuth of the elongated sinkholes, comparison of the previously described sets with the strikes of the main regional geological structures. The obtained results show, in addition to the coincidence of the main regional discontinuity systems with the major axis of elongated sinkholes, a clear control exerted by development and evolution of the sinkholes on the formation of coastal inlets and bays. Eventually, the approach here presented may be applied in other karst coastal sinkhole-prone areas, to gain new knowledge on the genesis and evolution of coastal sinkholes, and to properly evaluate the hazard they pose to the anthropogenic environment.

A decadally-resolved paleohurricane record archived in the late Holocene sediments of a Florida sinkhole

A 4500-year record of hurricane-induced storm surges is developed from sediment cores collected from a coastal sinkhole near Apalachee Bay, Florida. Recent deposition of sand layers in the upper sediments of the pond was found to be contemporaneous with significant, historic storm surges at the site modeled using SLOSH and the Best Track, post-1851 A.D. dataset. Using the historic portion of the record for calibration, paleohurricane deposits were identified by sand content and dated using radiocarbon-based age models. Marine-indicative foraminifera, some originating at least 5 km offshore, were present in several modern and ancient storm deposits. The presence and long-term preservation of offshore foraminifera suggest that this site and others like it may yield promising microfossil-based paleohurricane reconstructions in the future. Due to the sub-decadal (~ 7 years) resolution of the record and the site's high susceptibility to hurricane-generated storm surges, the average, local frequency of recorded events, approximately 3.9 storms per century, is greater than that of previously published paleohurricane records from the region. The high incidence of recorded events permitted a time series of local hurricane frequency during the last five millennia to be constructed. Variability in the frequency of the largest storm layers was found to be greater than what would likely occur by chance alone, with intervals of both anomalously high and low storm frequency identified. However, the rate at which smaller layers were deposited was relatively constant over the last five millennia. This may suggest that significant variability in hurricane frequency has occurred only in the highest magnitude events. The frequency of high magnitude events peaked near 6 storms per century between 2800 and 2300 years ago. High magnitude events were relatively rare with about 0–3 storms per century occurring between 1900 and 1600 years ago and between 400 and 150 years ago. A marked decline in the number of large storm deposits, which began around 600 years ago, has persisted through present with below average frequency over the last 150 years when compared to the preceding five millennia.

Mechanism of Salt Contamination of Karstic Springs Related to the Messinian Deep Stage. The Speleological Model of Port Miou (France)

Submarine karstic springs are frequent on the Mediterranean shore but most of them are brackish which prohibits their use. The numerous attempts to catch these springs ended in failure. Recent studies on the development of karst systems and the paleogeography of the Mediterranean sea explain these failures. Studies on the shores of south-eastern France have enabled us to propose an operating model that explains the mechanism of salt contamination. The Port Miou system (Cassis, France) is a two kilometers long submarine gallery developped in the limestone series of Calanques (Marseille, France). The average discharge is between 2 to 5 m3/s but the water is brackish. In the 70's a dam was built to prevent sea intrusion in the cave but the water remained brackish upstream of the dam. The use of helium, and then rebreathers by cave divers, made it possible to explore a vertical pit down to -179 m below the sea level at the end of the cave. At that depth, the water is still brackish. Important quantity of titanium was observed at the surface of the cave sediment upstream of the dam and at the end of the cave. The titanium comes from the residual product of a factory of alumina that is discharged in the Cassidaigne submarine canyon, at a depth of 300 m b.s.l., a few kilometers south to the spring. This residual product locally called «red mud» is very rich in titanium. This supports the model of a sea water aspiration in a deep gallery connected to the canyon. The Cassidaigne canyon that cuts a limestone plateau with dolines and caves is probably a pocket valley. Its presence is related to the several stages of lowering of the Mediterranean sea at the Messinian Deep Stage that allowed the existence of cave networks up to several hundreds of meters below the present sea level. The sea water is now sucked into the system. A similar example exists in Kefalonia island (Greece) where a sea intrusion is observed in coastal sinkholes. This model explains why the different attempts to diminish the salinity of these brackish springs, by construction of dams close to the outlets, have failed.

A new atlantasellid isopod (Asellota: Aselloidea) from the flooded coastal karst of the Dominican Republic (Hispaniola): evidence for an exopod on a thoracic limb and biogeographical implications

AbstractA new representative of the thus far monotypic, Bermudan aselloid family Atlantasellidae is described from the freshwater layers of two coastal sinkholes on the south‐west Dominican Republic, Hispaniola. Atlantasellus dominicanus sp. nov. is extraordinary among isopods in retaining a remnant of the exopod on one of its pereiopods; no other isopod is known to express a schizopodous condition of thoracic limbs. The locomotory behaviour, body volvation habits, and apparent specificity of the new taxon for life on submerged decaying wood in cave waters are described. Analysis of palaeogeographic and ecological evidence supports the interpretation of the Atlantasellidae as a thalassoid lineage, contrary to previous phylogenetically supported assumptions considering them to be an ancient, freshwater lineage.