Climate-relevant Trace Gases Research Articles

Winter season Southern Ocean distributions of climate-relevant trace gases

Abstract. Climate-relevant trace gas air–sea exchange exerts an important control on air quality and climate, especially in remote regions of the planet such as the Southern Ocean. It is clear that polar regions exhibit seasonal trends in productivity and biogeochemical cycling, but almost all of the measurements there are skewed to summer months. If we want to understand how the Southern Ocean affects the balance of climate through trace gas air–sea exchange, it is essential to expand our measurement database over greater temporal and spatial scales, including all seasons. Therefore, in this study, we report measured concentrations of dimethylsulfide (DMS, as well as related sulfur compounds) and isoprene in the Atlantic sector of the Southern Ocean during the winter to understand the spatial and temporal distribution in comparison to current knowledge and climatological calculations for the Southern Ocean. The observations of isoprene are the first in the winter season in the Southern Ocean. We found that the concentrations of DMS from the surface seawater and air in the investigated area were 1.03 ± 0.98 nmol−1 and 28.80 ± 12.49 pptv, respectively. The concentrations of isoprene in surface seawater were 14.46 ± 12.23 pmol−1. DMS and isoprene fluxes were 4.04 ± 4.12 µmol m−2 d−1 and 80.55 ± 78.57 nmol m−2 d−1, respectively. These results are generally lower than the values presented or calculated in currently used climatologies and models. More data are urgently needed to better interpolate climatological values and validate process-oriented models, as well as to explore how finer measurement resolution, both spatially and temporally, can influence air–sea flux calculations.

Nitrous oxide and methane in a changing Arctic Ocean

Human activities are changing the Arctic environment at an unprecedented rate resulting in rapid warming, freshening, sea ice retreat and ocean acidification of the Arctic Ocean. Trace gases such as nitrous oxide (N2O) and methane (CH4) play important roles in both the atmospheric reactivity and radiative budget of the Arctic and thus have a high potential to influence the region’s climate. However, little is known about how these rapid physical and chemical changes will impact the emissions of major climate-relevant trace gases from the Arctic Ocean. The combined consequences of these stressors present a complex combination of environmental changes which might impact on trace gas production and their subsequent release to the Arctic atmosphere. Here we present our current understanding of nitrous oxide and methane cycling in the Arctic Ocean and its relevance for regional and global atmosphere and climate and offer our thoughts on how this might change over coming decades.

Volatile organic compound fluxes in a subarctic peatland and lake

Abstract. Ecosystems exchange climate-relevant trace gases with the atmosphere, including volatile organic compounds (VOCs) that are a small but highly reactive part of the carbon cycle. VOCs have important ecological functions and implications for atmospheric chemistry and climate. We measured the ecosystem-level surface–atmosphere VOC fluxes using the eddy covariance technique at a shallow subarctic lake and an adjacent graminoid-dominated fen in northern Sweden during two contrasting periods: the peak growing season (mid-July) and the senescent period post-growing season (September–October). In July, the fen was a net source of methanol, acetaldehyde, acetone, dimethyl sulfide, isoprene, and monoterpenes. All of these VOCs showed a diel cycle of emission with maxima around noon and isoprene dominated the fluxes (93±22 µmol m−2 d−1, mean ± SE). Isoprene emission was strongly stimulated by temperature and presented a steeper response to temperature (Q10=14.5) than that typically assumed in biogenic emission models, supporting the high temperature sensitivity of arctic vegetation. In September, net emissions of methanol and isoprene were drastically reduced, while acetaldehyde and acetone were deposited to the fen, with rates of up to -6.7±2.8 µmol m−2 d−1 for acetaldehyde. Remarkably, the lake was a sink for acetaldehyde and acetone during both periods, with average fluxes up to -19±1.3 µmol m−2 d−1 of acetone in July and up to -8.5±2.3 µmol m−2 d−1 of acetaldehyde in September. The deposition of both carbonyl compounds correlated with their atmospheric mixing ratios, with deposition velocities of -0.23±0.01 and -0.68±0.03 cm s−1 for acetone and acetaldehyde, respectively. Even though these VOC fluxes represented less than 0.5 % and less than 5 % of the CO2 and CH4 net carbon ecosystem exchange, respectively, VOCs alter the oxidation capacity of the atmosphere. Thus, understanding the response of their emissions to climate change is important for accurate prediction of the future climatic conditions in this rapidly warming area of the planet.

Production of methane and ethylene from plastic in the environment.

Mass production of plastics started nearly 70 years ago and the production rate is expected to double over the next two decades. While serving many applications because of their durability, stability and low cost, plastics have deleterious effects on the environment. Plastic is known to release a variety of chemicals during degradation, which has a negative impact on biota. Here, we show that the most commonly used plastics produce two greenhouse gases, methane and ethylene, when exposed to ambient solar radiation. Polyethylene, which is the most produced and discarded synthetic polymer globally, is the most prolific emitter of both gases. We demonstrate that the production of trace gases from virgin low-density polyethylene increase with time, with rates at the end of a 212-day incubation of 5.8 nmol g-1 d-1 of methane, 14.5 nmol g-1 d-1 of ethylene, 3.9 nmol g-1 d-1 of ethane and 9.7 nmol g-1 d-1 of propylene. Environmentally aged plastics incubated in water for at least 152 days also produced hydrocarbon gases. In addition, low-density polyethylene emits these gases when incubated in air at rates ~2 times and ~76 times higher than when incubated in water for methane and ethylene, respectively. Our results show that plastics represent a heretofore unrecognized source of climate-relevant trace gases that are expected to increase as more plastic is produced and accumulated in the environment.

Variations of the Organic Matter Composition in the Sea Surface Microlayer: A Comparison between Open Ocean, Coastal, and Upwelling Sites Off the Peruvian Coast.

The sea surface microlayer (SML) is the thin boundary layer between the ocean and the atmosphere, making it important for air-sea exchange processes. However, little is known about what controls organic matter composition in the SML. In particular, there are only few studies available on the differences of the SML of various oceanic systems. Here, we compared the organic matter and neuston species composition in the SML and the underlying water (ULW) at 11 stations with varying distance from the coast in the Peruvian upwelling regime, a system with high emissions of climate relevant trace gases, such as N2O and CO2. In the open ocean, organic carbon, and amino acids were highly enriched in the SML compared to the ULW. The enrichment decreased at the coastal stations and vanished in the upwelling regime. At the same time, the degradation of organic matter increased from the open ocean to the upwelling stations. This suggests that in the open ocean, upward transport processes or new production of organic matter within the SML are faster than degradation processes. Phytoplankton was generally not enriched in the SML, one group though, the Trichodesmium-like TrL (possibly containing Trichodesmium), were enriched in the open ocean but not in the upwelling region indicating that they find a favorable habitat in the open ocean SML. Our data show that the SML is a distinct habitat; its composition is more similar among different systems than between SML and ULW of a single station. Generally the enrichment of organic matter is assumed to be reduced when encountering low primary production and high wind speeds. However, our study shows the highest enrichments of organic matter in the open ocean which had the lowest primary production and the highest wind speeds.

Low oxygen eddies in the eastern tropical North Atlantic: Implications for N2O cycling

Nitrous oxide (N2O) is a climate relevant trace gas, and its production in the ocean generally increases under suboxic conditions. The Atlantic Ocean is well ventilated, and unlike the major oxygen minimum zones (OMZ) of the Pacific and Indian Oceans, dissolved oxygen and N2O concentrations in the Atlantic OMZ are relatively high and low, respectively. This study, however, demonstrates that recently discovered low oxygen eddies in the eastern tropical North Atlantic (ETNA) can produce N2O concentrations much higher (up to 115 nmol L−1) than those previously reported for the Atlantic Ocean, and which are within the range of the highest concentrations found in the open-ocean OMZs of the Pacific and Indian Oceans. N2O isotope and isotopomer signatures, as well as molecular genetic results, also point towards a major shift in the N2O cycling pathway in the core of the low oxygen eddy discussed here, and we report the first evidence for potential N2O cycling via the denitrification pathway in the open Atlantic Ocean. Finally, we consider the implications of low oxygen eddies for bulk, upper water column N2O at the regional scale, and point out the possible need for a reevaluation of how we view N2O cycling in the ETNA.

SO2 Initiates the Efficient Conversion of NO2 to HONO on MgO Surface.

Nitrous acid (HONO) is an important source of hydroxyl radical (OH) that determines the fate of many chemically active and climate relevant trace gases. However, the sources and the formation mechanisms of HONO remain poorly understood. In this study, the effect of SO2 on the heterogeneous reactions of NO2 on MgO as a mineral dust surrogate was investigated. The reactivity of MgO to NO2 is weak, while coexisting SO2 can increase the uptake coefficients of NO2 on MgO by 2-3 orders of magnitude. The uptake coefficients of NO2 on SO2-aged MgO are independent of NO2 concentrations in the range of 20-160 ppbv and relative humidity (0-70%RH). The reaction mechanism was demonstrated to be a redox reaction between NO2 and surface sulfite. In the presence of SO2, NO2 was reduced to nitrite under dry conditions, which could be further converted to gas-phase HONO in humid conditions. These results suggest that the reductive effect of SO2 on the heterogeneous conversion of NO2 to HONO may have a significant contribution to the unknown sources of HONO observed in polluted areas (for example, in China).

Climate relevant trace gases (N2O and CH4) in the Eurasian Basin (Arctic Ocean)

The concentration of greenhouse gases, including nitrous oxide (N2O), methane (CH4), and compounds such as total dimethylsulfoniopropionate (DMSPt), along with other oceanographic variables were measured in the ice-covered Arctic Ocean within the Eurasian Basin (EAB). The EAB is affected by the perennial ice-pack and has seasonal microalgal blooms, which in turn may stimulate microbes involved in trace gas cycling. Data collection was carried out on board the LOMROG III cruise during the boreal summer of 2012. Water samples were collected from the surface to the bottom layer (reaching 4300m depth) along a South-North transect (SNT), from 82.19°N, 8.75°E to 89.26°N, 58.84°W, crossing the EAB through the Nansen and Amundsen Basins. The Polar Mixed Layer and halocline waters along the SNT showed a heterogeneous distribution of N2O, CH4 and DMSPt, fluctuating between 42-111 and 27–649% saturation for N2O and CH4, respectively; and from 3.5 to 58.9nmolL−1 for DMSPt. Spatial patterns revealed that while CH4 and DMSPt peaked in the Nansen Basin, N2O was higher in the Amundsen Basin. In the Atlantic Intermediate Water and Arctic Deep Water N2O and CH4 distributions were also heterogeneous with saturations between 52% and 106% and 28% and 340%, respectively. Remarkably, the Amundsen Basin contained less CH4 than the Nansen Basin and while both basins were mostly under-saturated in N2O. We propose that part of the CH4 and N2O may be microbiologically consumed via methanotrophy, denitrification, or even diazotrophy, as intermediate and deep waters move throughout EAB associated with the overturning water mass circulation. This study contributes to baseline information on gas distribution in a region that is increasingly subject to rapid environmental changes, and that has an important role on global ocean circulation and climate regulation.

Edge effects on N2O, NO and CH4 fluxes in two temperate forests

Forest ecosystems may act as sinks or sources of nitrogen (N) and carbon (C) compounds, such as the climate relevant trace gases nitrous oxide (N2O), nitric oxide (NO) and methane (CH4). Forest edges, which catch more atmospheric deposition, have become important features in European landscapes and elsewhere. Here, we implemented a fully automated measuring system, comprising static and dynamic measuring chambers determining N2O, NO and CH4 fluxes along an edge-to-interior transect in an oak (Q. robur) and a pine (P. nigra) forest in northern Belgium. Each forest was monitored during a 2-week measurement campaign with continuous measurements every 2h. NO emissions were 9-fold higher than N2O emissions. The fluxes of NO and CH4 differed between forest edge and interior, but not for N2O. This edge effect was more pronounced in the oak than in the pine forest. In the oak forest, edges emitted less NO (on average 60%) and took up more CH4 (on average 177%). This suggests that landscape structure can play a role in the atmospheric budgets of these climate relevant trace gases. Soil moisture variation between forest edge and interior was a key variable explaining the magnitude of NO and CH4 fluxes in our measurement campaign. To better understand the environmental impact of N and C trace gas fluxes from forest edges, additional and long-term measurements in other forest edges are required.

Permafrost-affected soils and their carbon pools with a focus on the Russian Arctic

Abstract. Permafrost-affected soils have accumulated enormous pools of organic matter during the Quaternary period. The area occupied by these soils amounts to more than 8.6 million km2, which is about 27% of all land areas north of 50° N. Therefore, permafrost-affected soils are considered to be one of the important cryosphere elements within the climate system. Due to the cryopedogenic processes that form these particular soils and the overlying vegetation that is adapted to the arctic climate, organic matter has accumulated to the present extent of up to 1024 Pg (1 Pg = 1015 g = 1 Gt) of soil organic carbon stored within the uppermost 3 m of ground. Considering the observed progressive climate change and the projected polar amplification, permafrost-affected soils will undergo fundamental property changes. Higher turnover and mineralisation rates of the organic matter are consequences of these changes, which are expected to result in an increased release of climate-relevant trace gases into the atmosphere. The controversy of whether permafrost regions continue accumulating carbon or already function as a carbon source remains open until today. An increased focus on this subject matter, especially in underrepresented Siberian regions, could contribute to a more robust estimation of the soil organic carbon pool of permafrost regions and at the same time improve the understanding of the carbon sink and source functions of permafrost-affected soils.

Impact of Arctic meltdown on the microbial cycling of sulphur

The Arctic is warming faster than any other region in the world. The resultant large-scale shift in sea ice cover could increase oceanic emissions of dimethylsulphide, a climate-relevant trace gas generated by ice algae and phytoplankton. The Arctic is warming faster than any other region in the world. Among the changes already witnessed, the loss of seasonal sea ice is by far the most striking. This large-scale shift in sea-ice cover could affect oceanic emissions of dimethylsulphide — a climate-relevant trace gas generated by ice algae and phytoplankton. During the spring melt period, conditions at the margin of Arctic sea ice favour the growth of these organisms. As a result, high levels of dimethylsulphide can accumulate at the bottom of the ice, in leads, and in the water column at the ice edge during the spring melt season. Production of dimethylsulphide is not limited to the sea-ice edge, however. Significant concentrations have also been detected in the seasonal ice-free zone in spring and summer. Preliminary observations, together with model results, suggest that the production and emission of dimethylsulphide will increase in the Arctic as seasonal sea-ice cover recedes. If it escapes to the atmosphere, this newly generated dimethylsulphide could potentially cool the Arctic climate.

Improved quantification of microbial CH<sub>4</sub> oxidation efficiency in arctic wetland soils using carbon isotope fractionation

Abstract. Permafrost-affected tundra soils are significant sources of the climate-relevant trace gas methane (CH4). The observed accelerated warming of the arctic will cause deeper permafrost thawing, followed by increased carbon mineralization and CH4 formation in water-saturated tundra soils, thus creating a positive feedback to climate change. Aerobic CH4 oxidation is regarded as the key process reducing CH4 emissions from wetlands, but quantification of turnover rates has remained difficult so far. The application of carbon stable isotope fractionation enables the in situ quantification of CH4 oxidation efficiency in arctic wetland soils. The aim of the current study is to quantify CH4 oxidation efficiency in permafrost-affected tundra soils in Russia's Lena River delta based on stable isotope signatures of CH4. Therefore, depth profiles of CH4 concentrations and δ13CH4 signatures were measured and the fractionation factors for the processes of oxidation (αox) and diffusion (αdiff) were determined. Most previous studies employing stable isotope fractionation for the quantification of CH4 oxidation in soils of other habitats (such as landfill cover soils) have assumed a gas transport dominated by advection (αtrans = 1). In tundra soils, however, diffusion is the main gas transport mechanism and diffusive stable isotope fractionation should be considered alongside oxidative fractionation. For the first time, the stable isotope fractionation of CH4 diffusion through water-saturated soils was determined with an αdiff = 1.001 ± 0.000 (n = 3). CH4 stable isotope fractionation during diffusion through air-filled pores of the investigated polygonal tundra soils was αdiff = 1.013 ± 0.003 (n = 18). Furthermore, it was found that αox differs widely between sites and horizons (mean αox = 1.017 ± 0.009) and needs to be determined on a case by case basis. The impact of both fractionation factors on the quantification of CH4 oxidation was analyzed by considering both the potential diffusion rate under saturated and unsaturated conditions and potential oxidation rates. For a submerged, organic-rich soil, the data indicate a CH4 oxidation efficiency of 50% at the anaerobic–aerobic interface in the upper horizon. The improved in situ quantification of CH4 oxidation in wetlands enables a better assessment of current and potential CH4 sources and sinks in permafrost-affected ecosystems and their potential strengths in response to global warming.

Technical Note: A simple method for air–sea gas exchange measurements in mesocosms and its application in carbon budgeting

Abstract. Mesocosms as large experimental units provide the opportunity to perform elemental mass balance calculations, e.g. to derive net biological turnover rates. However, the system is in most cases not closed at the water surface and gases exchange with the atmosphere. Previous attempts to budget carbon pools in mesocosms relied on educated guesses concerning the exchange of CO2 with the atmosphere. Here, we present a simple method for precise determination of air–sea gas exchange in mesocosms using N2O as a deliberate tracer. Beside the application for carbon budgeting, transfer velocities can be used to calculate exchange rates of any gas of known concentration, e.g. to calculate aquatic production rates of climate relevant trace gases. Using an arctic KOSMOS (Kiel Off Shore Mesocosms for future Ocean Simulation) experiment as an exemplary dataset, it is shown that the presented method improves accuracy of carbon budget estimates substantially. Methodology of manipulation, measurement, data processing and conversion to CO2 fluxes are explained. A theoretical discussion of prerequisites for precise gas exchange measurements provides a guideline for the applicability of the method under various experimental conditions.

Novel laser spectroscopic technique for continuous analysis of N2O isotopomers – application and intercomparison with isotope ratio mass spectrometry

Nitrous oxide (N(2)O), a highly climate-relevant trace gas, is mainly derived from microbial denitrification and nitrification processes in soils. Apportioning N(2)O to these source processes is a challenging task, but better understanding of the processes is required to improve mitigation strategies. The N(2)O site-specific (15)N signatures from denitrification and nitrification have been shown to be clearly different, making this signature a potential tool for N(2)O source identification. We have applied for the first time quantum cascade laser absorption spectroscopy (QCLAS) for the continuous analysis of the intramolecular (15)N distribution of soil-derived N(2)O and compared this with state-of-the-art isotope ratio mass spectrometry (IRMS). Soil was amended with nitrate and sucrose and incubated in a laboratory setup. The N(2)O release was quantified by FTIR spectroscopy, while the N(2)O intramolecular (15)N distribution was continuously analyzed by online QCLAS at 1 Hz resolution. The QCLAS results on time-integrating flask samples were compared with those from the IRMS analysis. The analytical precision (2σ) of QCLAS was around 0.3‰ for the δ(15)N(bulk) and the (15)N site preference (SP) for 1-min average values. Comparing the two techniques on flask samples, excellent agreement (R(2)= 0.99; offset of 1.2‰) was observed for the δ(15)N(bulk) values while for the SP values the correlation was less good (R(2 )= 0.76; offset of 0.9‰), presumably due to the lower precision of the IRMS SP measurements. These findings validate QCLAS as a viable alternative technique with even higher precision than state-of-the-art IRMS. Thus, laser spectroscopy has the potential to contribute significantly to a better understanding of N turnover in soils, which is crucial for advancing strategies to mitigate emissions of this efficient greenhouse gas.

Influence of a nitrification inhibitor and of placed N-fertilization on N2O fluxes from a vegetable cropped loamy soil

Arable soils are a major source of the climate relevant trace gas nitrous oxide (N2O). Although N2O emissions from soils increase with the amount of N-fertilizer, there is still a lack of data for intensively fertilized systems, such as vegetable production. We investigated the effect of an ammonium sulfate nitrate (ASN) fertilization either placed or broadcast applied combined with a nitrification inhibitor (3,4-dimethylepyrazole phosphate (DMPP)) on soil surface N2O fluxes as compared to conventional broadcast ASN fertilization in a lettuce–cauliflower rotation over two years of measurement. Except for a lower cauliflower yield in the second experimental year with placed fertilization, no differences in yields between the fertilized treatments were observed. Annual cumulative N2O emissions of the conventionally fertilized treatment were 8.8 and 4.7kgN2O-Nha−1yr−1 for the first and second experimental year, respectively, indicating a high inter-annual variability.The addition of the nitrification inhibitor significantly reduced N2O emissions during the cropping season and also during the winter period, resulting in an annual reduction of 45 and 40% as compared to the conventionally fertilized (CONV) treatment. The reason for the lower N2O release in the DMPP treatment as compared to the conventionally fertilized treatment remained unclear. Since we did not find any significant differences in the mineral N pools during periods with distinctive inhibition, this can be ruled out as reason for the lower N2O release in the DMPP treatment. We found lower soil respiration in the DMPP treatment during several months starting about six weeks after fertilizer application.In contrast to the treatment with nitrification inhibitor, the placed fertilization as an N-depot (fertilizer bands inserted into the soil) did not reduce annual N2O emissions, although the ratio of ammonium (NH4+) to nitrate (NO3−) in the first weeks after N-application indicate inhibition of nitrification in the fertilizer depot. We assume that, even though NH4+ concentrations in the depots were high, toxicity was not sufficient for a complete inhibition of microbial activity in the surrounding of the depots, resulting in considerable N2O production. The emission factors calculated for CONV treatment were 1.6 and 0.8% for the first and second experimental year, respectively. For the treatment with nitrification inhibitor (NI), they were only 0.9 and 0.5%; for the treatment with placed fertilization as an N-depot (DEPOT) 2.0 and 0.8%. They were thus within the range proposed by the guidelines of the IPCC (2006).However, although the N-input related N2O emission factors were within the range proposed by the guidelines of the IPCC, the absolute N2O emissions from the intensively fertilized vegetable field were high. For effective, but environmentally sound vegetable production, a deeper understanding of nitrification inhibitory strategies is necessary.

Nitric oxide emissions from soils: a case study with temperate soils from Saxony, Germany

Nitrogen oxides (NOx) are involved in acid rain and ozone formation, as well as destruction. NOx are climate-relevant trace gases in the atmosphere. Atmospheric NOx originate from anthropogenic emissions (mainly combustion processes). NO from natural processes derives from thunderstorms and soil microbial processes. They may play a crucial role in soil–atmosphere feedback processes. This study aims to investigate NOx-emissions from soils under different land use, geographical and meteorological conditions. NOx-emissions were quantified in both field and laboratory experiments with a closed static chamber. Disturbed soil samples have been used for laboratory experiments. A climate chamber was used to regulate soil temperature of the samples. Field experiments showed that NO-soil emissions strongly depend on soil temperature. NO-emissions from a soil under meadow showed significant daily variations, unlike soil below spruce forest. Peak emission values were 18 μg NO–N m−2 h−1 above meadow and 1.3 μg NO–N m−2 h−1 under forest canopy. In addition, NO-emissions of meadow and forest soil were studied in a climate chamber, enhanced by an additional experiment with agricultural soil. These experiments revealed strong exponential correlations of NO-emissions and soil temperature. Maximum values reached above 400 μg NO–N m−2 h−1 from agricultural soils at soil temperatures above 50°C. This study shows that soil NO-emissions strongly depend on temperature, vegetation type and geographical position. Consequently, NO-emissions may have a positive feedback effect on climate change.

Quantifying sources and sinks of trace gases using space-borne measurements: current and future science

We have been observing the Earth's upper atmosphere from space for several decades, but only over the past decade has the necessary technology begun to match our desire to observe surface air pollutants and climate-relevant trace gases in the lower troposphere, where we live and breathe. A new generation of Earth-observing satellites, capable of probing the lower troposphere, are already orbiting hundreds of kilometres above the Earth's surface with several more ready for launch or in the planning stages. Consequently, this is one of the most exciting times for the Earth system scientists who study the countless current-day physical, chemical and biological interactions between the Earth's land, ocean and atmosphere. First, I briefly review the theory behind measuring the atmosphere from space, and how these data can be used to infer surface sources and sinks of trace gases. I then present some of the science highlights associated with these data and how they can be used to improve fundamental understanding of the Earth's climate system. I conclude the paper by discussing the future role of satellite measurements of tropospheric trace gases in mitigating surface air pollution and carbon trading.

Methanogenic activity and biomass in Holocene permafrost deposits of the Lena Delta, Siberian Arctic and its implication for the global methane budget

AbstractPermafrost environments within the Siberian Arctic are natural sources of the climate relevant trace gas methane. In order to improve our understanding of the present and future carbon dynamics in high latitudes, we studied the methane concentration, the quantity and quality of organic matter, and the activity and biomass of the methanogenic community in permafrost deposits. For these investigations a permafrost core of Holocene age was drilled in the Lena Delta (72°22′N, 126°28′E). The organic carbon of the permafrost sediments varied between 0.6% and 4.9% and was characterized by an increasing humification index with permafrost depth. A high CH4 concentration was found in the upper 4 m of the deposits, which correlates well with the methanogenic activity and archaeal biomass (expressed as PLEL concentration). Even the incubation of core material at −3 and −6°C with and without substrates showed a significant CH4 production (range: 0.04–0.78 nmol CH4 h−1 g−1). The results indicated that the methane in Holocene permafrost deposits of the Lena Delta originated from modern methanogenesis by cold‐adapted methanogenic archaea. Microbial generated methane in permafrost sediments is so far an underestimated factor for the future climate development.

Ecodynamics and dissolved gas chemistry routines for ocean circulation models

Interactions between oceanic nitrate ecology and circulation determine the marine distribution of dissolved, climate relevant trace gases such as dimethyl sulfide (DMS) and carbonyl sulfide (OCS), and a variety of hydrocarbons. Our group is constructing a suite of ecosystem/reaction/transport models, which link nitrate to the chemistry of volatiles near the sea–air interface. In this paper, we describe programs which will be inserted into the high resolution Parallel Ocean Program. Major features of the coding include: (1) ecodynamics represented in seven biological compartments (phytoplankton, zooplankton, bacteria, detritus, nitrate, ammonium and dissolved organic nitrogen). Light limited primary production is computed, along with nitrogen cycling among the bioentities. (2) Photochemistry for the volatile species DMS, OCS, the methyl halides, nonmethane hydrocarbons (NMHC) and ammonia. DMS and the halides are emitted by phytoplankton, while OCS and NMHC are produced by photolysis of dissolved organic material. Ammonia is exuded by animals and bacteria. Removal mechanisms for the gases include consumption by organisms, hydrolysis, chlorination and interfacial transfer. (3) Explicit, efficient and mass conserving numerical solutions for the biological and chemical continuity equations. Production and loss forms are generalized and automated so that they are readily applied to new constituents. Ecology and the chemical transformations are exposed qualitatively to begin, and are then expressed as differential and differencing equations. The structure of the program is described in terms of the major subroutines and their purposes. Results are provided from both one- and three-dimensional sample runs. Computational aspects such as performance and code availability are discussed.

Emission of Climate-Relevant Trace Gases and Succession of Microbial Communities during Open-Windrow Composting

Determination of different indicators of microbial biomass, community structure, and bioactivity by the fumigation extraction method, as well as determination of phospholipid fatty acids (PLFAs) and their subfractions and the measurement of trace gases, respectively, provides valuable information about microbial succession in composting processes. The emission rates of carbon dioxide (CO(inf2)), methane (CH(inf4)), and nitrous oxide (N(inf2)O) increased successively during compost maturation: initially in the presence of easily degradable nutrients, during high temperature, and after the temperature had cooled down, respectively. The emission rate patterns of these trace gases corresponded to the concentrations of PLFAs and their particular subfractions. (i) Similar to the CO(inf2) emission rates, microbial biomass estimations by fumigation extraction and by determination of the amount of total PLFAs showed a discontinuous decrease during the composting process, with a slight increase at the end of the observation period. (ii) An increase in ether lipids, indicating the enhanced presence of archaean methanogens, and an elevated CH(inf4) emission were observed at the same time. (iii) The period of enhanced N(inf2)O emission corresponded to the increase in beta and omega hydroxy fatty acids derived from the outer membrane. Additionally, the continuous increase in branched-chain fatty acids suggested an increase in gram-positive bacteria and actinomycetes, and the decrease in polyunsaturated fatty acids indicated a decrease in eukaryotic cells during the composting.