Chlorin Ring Research Articles

A molecular dynamics simulation study of EthylChlorophyllide A molecules confined in a SiO2 nanoslit.

This paper investigates the dynamic behavior of EthylChlorophyllide A (EChlideA) molecules in a methanol solution confined within a 4nm silica nanoslit, using molecular dynamics simulations over a duration of 1ms. Three systems, containing 1, 2, and 4 solutes, were studied at 298K. The results demonstrate that EChlideA molecules predominantly adsorb onto the silica surfaces, driven by specific interactions between chlorin ring's methyl group and the hydroxyl groups of the silica. This adsorption leads to stable binding, particularly in less crowded environments, as indicated by the potential of mean force analysis. Higher molecular concentrations, such as those with four EChlideA molecules, introduce variation in binding strength due to molecular aggregation and complex interactions. The orientation analysis reveals that the chlorin ring tends to align parallel to the surface, requiring rotational adjustments during surface diffusion. In addition, solvent coordination around the Mg ion remains consistent under bulk conditions, although with some variation in higher concentrations. This study also highlights a decrease in linear diffusion and an increase in rotational relaxation times for EChlideA molecules within the confined nanoslit, reflecting the influence of molecular concentration and arrangement on their dynamics. These findings provide valuable insights into the role of surface interactions, molecular orientation, and solvent coordination in confined environments, offering implications for the design of nanoscale systems.

Fluoro-2,6-dimethylphenyl mono-hydroxychlorin and porphyrin congeners

Mono-hydroxychlorins are uncommon macrocycles that have only been synthetically realized by modifying porphyrin rings using the harsh oxidizing agent OsO4. We show here that a more directed delivery of the mono-hydroxychlorin may be concomitantly obtained from the oxidation of porphyrinogen using the mild conditions of the high dilution Lindsey porphyrin forming reaction where water content is minimized by using dry CHCl3 within the environment of a glovebox. We now report the direct synthesis of 17,18-dihydro-18-hydroxy-5,10,15,20-tetrakis-(4-fluoro,2,6-dimethylphenyl)-porphyrin (2H-TFChl-[Formula: see text]OH) together with the corresponding freebase porphyrin TFP. The TFP has been metalated with FeBr2 and MgBr2•OEt2 resulting in metalloporphyrins Fe(III)TFP(Cl) and Mg(II)-TFP which have been structurally characterized by single-crystal X-ray crystallography. We find that the excited state properties of the mono-hydroxychlorin are similar to that of its parent TFP and Mg(II)TFP porphyrin congeners. Excited state deactivation by vibronic coupling to the high energy O-H oscillator is circumvented with the hydroxyl group remote to the 18[Formula: see text]-electron framework of the chlorin ring. These results reveal that strong H-bonding groups may be introduced on the periphery of the chlorin ring while maintaining the light-gathering properties that lie at the heart of photosynthesis of the chlorin ring.

Absence of electron-transfer-associated changes in the time-dependent X-ray free-electron laser structures of the photosynthetic reaction center.

Using the X-ray free-electron laser (XFEL) structures of the photosynthetic reaction center from Blastochloris viridis that show light-induced time-dependent structural changes (Dods et al., (2021) Nature 589, 310-314), we investigated time-dependent changes in the energetics of the electron-transfer pathway, considering the entire protein environment of the protein structures and titrating the redox-active sites in the presence of all fully equilibrated titratable residues. In the dark and charge separation intermediate structures, the calculated redox potential (Em) values for the accessory bacteriochlorophyll and bacteriopheophytin in the electron-transfer-active branch (BL and HL) are higher than those in the electron-transfer-inactive branch (BM and HM). However, the stabilization of the charge-separated [PLPM]•+HL•- state owing to protein reorganization is not clearly observed in the Em(HL) values in the charge-separated 5 ps ([PLPM]•+HL•- state) structure. Furthermore, the expected chlorin ring deformation upon formation of HL•- (saddling mode) is absent in the HL geometry of the original 5 ps structure. These findings suggest that there is no clear link between the time-dependent structural changes and the electron-transfer events in the XFEL structures.

Absence of electron-transfer-associated changes in the time-dependent X-ray free-electron laser structures of the photosynthetic reaction center

Using the X-ray free-electron laser (XFEL) structures of the photosynthetic reaction center from Blastochloris viridis that show light-induced time-dependent structural changes (Dods et al., (2021) Nature 589, 310–314), we investigated time-dependent changes in the energetics of the electron-transfer pathway, considering the entire protein environment of the protein structures and titrating the redox-active sites in the presence of all fully equilibrated titratable residues. In the dark and charge separation intermediate structures, the calculated redox potential (Em) values for the accessory bacteriochlorophyll and bacteriopheophytin in the electron-transfer-active branch (BL and HL) are higher than those in the electron-transfer-inactive branch (BM and HM). However, the stabilization of the charge-separated [PLPM]•+HL•– state owing to protein reorganization is not clearly observed in the Em(HL) values in the charge-separated 5 ps ([PLPM]•+HL•– state) structure. Furthermore, the expected chlorin ring deformation upon formation of HL•– (saddling mode) is absent in the HL geometry of the original 5 ps structure. These findings suggest that there is no clear link between the time-dependent structural changes and the electron-transfer events in the XFEL structures.

Self-aggregation behavior of dimeric chlorophyll-a derivatives linked with ethynylene and m-phenylene moieties.

Chlorophyll(Chl)-a derivatives inserting an ethynylene-m-phenylene group between a zinc chlorin ring and a hydroxymethyl group, in which various substituents were introduced on the benzene spacer, were prepared as model compounds for the light-harvesting antennae (chlorosomes) of photosynthetic green bacteria. These compounds were synthesized from a C3-ethynylated Chl-a derivative via sequential Sonogashira cross-coupling reaction, and the effects of the substituents on the phenylene linker on their self-aggregation behaviors were investigated by electronic absorption, circular dichroism, and infrared absorption spectroscopic measurements. These studies exhibited that some compounds gave the disordered self-assemblies including several species; however, the zinc complex of the dimeric Chl-a derivative primarily allowed a single J-aggregate species in an aqueous Triton X-100 micellar solution. Additional control experiments revealed that its self-assembly was constructed through the hydrogen and coordination bonding involving the hydroxymethyl group on benzene ring, keto-carbonyl group at C13-position, and central zinc atom, and this is consistent with a conventional chlorosomal manner.

SINTESIS DAN TRANSISI ELEKTRONIK SENYAWA KOMPLEKS KLOROFIL DENGAN LOGAM (M = Co2+, Fe3+)

Metal complexes of chlorophyll (M = Co2+, Fe3+) have been prepared from a reaction of chlorophyll isolated from cassava leaves and metal precursors (CoCl2.6H2O or FeCl3) in methanol under reflux for 4 hours. FTIR spectra of the products indicated bond changes in chlorophyll structure particularly on absorption peaks with regard to N–H, N=C, C=C and C=O groups as a result of substitution of magnesium ion with cobalt(II) or iron(FE). UV-Vis spectra mainly showed hypsochromic shifts along with an increase in absorption intensity on Soret band area in the two complexes implying electronic effects of chlorin rings due to metal complexation.

RAFT synthesis of an amphiphilic block copolymer bearing chlorin rings in the hydrophobic segment and its application in photodynamic therapy

ABSTRACTRAFT polymerization of styrene (St) in the presence of 5,10,15,20‐tetrakis(pentafluorophenyl)porphyrin (TFPP) was conducted using 4‐cyano‐4‐(thiobenzoyl)thiopentanoic acid as a chain‐transfer agent and azobisisobutyronitrile as an initiator at 60 °C. The resulting polymer exhibited a chlorin‐like UV‐vis spectrum, which indicated that the polymer possessed a reduced TFPP structure. Furthermore, an SEC trace recorded using UV‐vis detector (λ = 410 nm), which selectively detected the TFPP‐incorporated polymer, shifted toward higher molecular mass as the polymerization progressed. This evidence indicated that TFPP acted as a vinylene‐type monomer, such as maleimide, to form a copolymer, namely, poly(St‐co‐TFPP). The mole fraction of TFPP units was estimated to be 0.74 × 10−3, which was close to that in the feed (1 × 10−3). Chain extension of poly(St‐co‐TFPP) with polyethylene glycol monomethyl ether acrylate (PEGA) was performed to afford the amphiphilic block copolymer poly(St‐co‐TFPP)‐b‐poly(PEGA). The degrees of polymerization of St and PEGA were determined to be 64 and 75, respectively. Poly(St‐co‐TFPP)‐b‐poly(PEGA) formed micelles following dialysis. The median diameter of the micelles in solution was determined to be 16 nm by DLS. The photocytotoxicity of the micelle solution was evaluated in a human glioblastoma cell line (U251) and an N‐methyl‐N'‐nitro‐N‐nitrosoguanidine‐induced mutant of a rat murine RGM‐1 gastric carcinoma mucosal cell line (RGK‐1). © 2017 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2017, 55, 3395–3403

Chlorosome-Inspired Synthesis of Templated Metallochlorin-Lipid Nanoassemblies for Biomedical Applications.

Chlorosomes are vesicular light-harvesting organelles found in photosynthetic green sulfur bacteria. These organisms thrive in low photon flux environments due to the most efficient light-to-chemical energy conversion, promoted by a protein-less assembly of chlorin pigments. These assemblies possess collective absorption properties and can be adapted for contrast-enhanced bioimaging applications, where maximized light absorption in the near-infrared optical window is desired. Here, we report a strategy for tuning light absorption toward the near-infrared region by engineering a chlorosome-inspired assembly of synthetic metallochlorins in a biocompatible lipid scaffold. In a series of synthesized chlorin analogues, we discovered that lipid conjugation, central coordination of a zinc metal into the chlorin ring, and a 3(1)-methoxy substitution were critical for the formation of dye assemblies in lipid nanovesicles. The substitutions result in a specific optical shift, characterized by a bathochromically shifted (72 nm) Qy absorption band, along with an increase in absorbance and circular dichroism as the ratio of dye-conjugated lipid was increased. These alterations in optical spectra are indicative of the formation of delocalized excitons states across each molecular assembly. This strategy of tuning absorption by mimicking the structures found in photosynthetic organisms may spur new opportunities in the development of biophotonic contrast agents for medical applications.

Construction of dendrimers with a square-shaped core consisting of zinc chlorophyll assembly via intermolecular nitrogen–zinc coordination

The first dendrimers consisting of self-assembled zinc chlorophyll derivatives are reported. Coordination-directed self-assembly of pyridine-appended zinc chlorophyll derivatives tethering a dendron moiety results in cyclic tetramers peripherally functionalized by dendrons via intermolecular axial coordination interaction between the nitrogen atom in the pyridine ring and the zinc atom in the chlorin ring. We characterized the formation of the cyclic tetramers by use of 1H NMR measurements including diffusion-ordered spectroscopy (DOSY). Four different types of dendrons were introduced in the zinc chlorophyll component to investigate the tolerance of the self-assembly to the dendron structure. All dendrimers exhibited similar stabilities, which demonstrates that the dendron moiety does not interfere with the self-assembly, such that more than 90% of the molecules are in the assembly at concentrations >0.2mM in benzene.

Synthesis, Photophysical Properties, and Biological Evaluation of trans-Bisthioglycosylated Tetrakis(fluorophenyl)chlorin for Photodynamic Therapy.

trans-Bisthioglycosylated tetrakis(fluorophenyl)chlorin (7) was designed as a powerful photodynamic therapy (PDT) photosensitizer based on the findings of our systematic studies. We show here that the trans-bisthioglycosylated structure of 7 enhanced its uptake by HeLa cells and that the chlorin ring of 7 increased the efficiency of reactive oxygen species generation under the standard condition of our photocytotoxicity test. The versatility of 7 in PDT treatment was established using weakly metastatic B16F1 melanoma cells, metastatic 4T1 breast cancer cells, the RGK-1 gastric carcinoma mucosal cell line, and three human glioblastoma cell lines (U87, U251, and T98G). The pharmacokinetics of 7 in mice bearing 4T1 breast cancer cells showed a high tumor-to-skin concentration ratio (approximately 60) at 24 h after intraperitoneal injection. The PDT efficacy of 7 in vivo was approximately 250-times higher than that of mono-l-aspartyl chlorin e6 (9) in mice bearing 4T1 breast cancer cells.

Light-Dependent Protochlorophyllide Oxidoreductase: Phylogeny, Regulation, and Catalytic Properties

This Current Topic focuses on light-dependent protochlorophyllide oxidoreductase (POR, EC 1.3.1.33). POR catalyzes the penultimate reaction of chlorophyll biosynthesis, i.e., the light-triggered reduction of protochlorophyllide to chlorophyllide. In this reaction, the chlorin ring of the chlorophyll molecule is formed, which is crucial for photosynthesis. POR is one of very few enzymes that are driven by light; however, it is unique in the need for its substrate to absorb photons to induce the conformational changes in the enzyme, which are required for its catalytic activation. Moreover, the enzyme is also involved in the negative feedback of the chlorophyll biosynthesis pathway and controls chlorophyll content via its light-dependent activity. Even though it has been almost 70 years since the first isolation of active POR complexes, our knowledge of them has markedly advanced in recent years. In this review, we summarize the current state of knowledge of POR, including the phylogenetic roots of POR, the mechanisms of the regulation of POR genes expression, the regulation of POR activity, the import of POR into plastids, the role of POR in PLB formation, and the molecular mechanism of protochlorophyllide reduction by POR. To the best of our knowledge, no previous review has compiled such a broad set of recent findings about POR.

Synthesis, aromaticity and photophysical behaviour of ferrocene- and ruthenocene-appended semisynthetic chlorin derivatives.

Two novel synthetic strategies to covalently link a metallocene electron-donor unit to a chlorin ring are presented. In one approach, pyropheophorbide a is readily converted into its 13(1) -ferrocenyl dehydro derivative by nucleophilic addition of the ferrocenyl anion to the 13(1) -carbonyl group. In another approach, the corresponding 13(1) -pentamethylruthenocenyl derivative is synthesised from 13(1) -fulvenylchlorin by a facile ligand exchange/deprotonation reaction with the [RuCp*(cod)Cl] (Cp*=pentamethylcyclopentadienyl; cod=1,5-cyclooctadiene) complex. The resulting metallocene-chlorins exhibit reduced aromaticity, which was unequivocally supported by ring-current calculations based on the gauge-including magnetically induced current (GIMIC) method and by calculated nucleus-independent chemical shift (NICS) values. The negative ring current in the isocyclic E ring suggests the antiaromatic character of this moiety and also clarifies the spontaneous reactivity of the complexes with oxygen. The oxidation products were isolated and their electrochemical and photophysical properties were studied. The ruthenocene derivatives turned out to be stable under light irradiation and showed photoinduced charge transfer with charge-separation lifetimes of 152-1029 ps.

Modified molecular interactions of the pheophytin and plastoquinone electron acceptors in photosystem II of chlorophyll D-containing Acaryochloris marina as revealed by FTIR spectroscopy.

Acaryochloris marina is a unique cyanobacterium that contains chlorophyll (Chl) d as a major pigment. Because Chl d has smaller excitation energy than Chl a used in ordinary photosynthetic organisms, the energetics of the photosystems of A. marina have been the subject of interest. It was previously shown that the redox potentials (E m's) of the redox-active pheophytin a (Pheo) and the primary plastoquinone electron acceptor (QA) in photosystem II (PSII) of A. marina are higher than those in Chl a-containing PSII, to compensate for the smaller excitation energy of Chl d (Allakhverdiev et al., Proc Natl Acad Sci USA 107: 3924-3929, 2010; ibid. 108: 8054-8058, 2011). To clarify the mechanisms of these E m increases, in this study, we have investigated the molecular interactions of Pheo and QA in PSII core complexes from A. marina using Fourier transform infrared (FTIR) spectroscopy. Light-induced FTIR difference spectra upon single reduction of Pheo and QA showed that spectral features in the regions of the keto and ester C=O stretches and the chlorin ring vibrations of Pheo and in the CO/CC stretching region of the Q A (-) semiquinone anion in A. marina are significantly different from those of the corresponding spectra in Chl a-containing cyanobacteria. These observations indicate that the molecular interactions, including the hydrogen bond interactions at the C=O groups, of these cofactors are modified in their binding sites of PSII proteins. From these results, along with the sequence information of the D1 and D2 proteins, it is suggested that A. marina tunes the E m's of Pheo and QA by altering nearby hydrogen bond networks to modify the structures of the binding pockets of these cofactors.

Dark-operative protochlorophyllide oxidoreductase generates substrate radicals by an iron-sulphur cluster in bacteriochlorophyll biosynthesis.

Photosynthesis converts solar energy to chemical energy using chlorophylls (Chls). In a late stage of biosynthesis of Chls, dark-operative protochlorophyllide (Pchlide) oxidoreductase (DPOR), a nitrogenase-like enzyme, reduces the C17 = C18 double bond of Pchlide and drastically changes the spectral properties suitable for photosynthesis forming the parental chlorin ring for Chl a. We previously proposed that the spatial arrangement of the proton donors determines the stereospecificity of the Pchlide reduction based on the recently resolved structure of the DPOR catalytic component, NB-protein. However, it was not clear how the two-electron and two-proton transfer events are coordinated in the reaction. In this study, we demonstrate that DPOR initiates a single electron transfer reaction from a [4Fe-4S]-cluster (NB-cluster) to Pchlide, generating Pchlide anion radicals followed by a single proton transfer, and then, further electron/proton transfer steps transform the anion radicals into chlorophyllide (Chlide). Thus, DPOR is a unique iron-sulphur enzyme to form substrate radicals followed by sequential proton- and electron-transfer steps with the protein folding very similar to that of nitrogenase. This novel radical-mediated reaction supports the biosynthesis of Chl in a wide variety of photosynthetic organisms.

Synthesis of chlorophyll derivatives possessing a mono/bi/terpyridinyl group at the C3-ethynyl terminal and optical properties of the π-conjugates

Chlorophyll-a derivatives possessing a pyridyl, 2,2′-bipyridinyl, or 2,2′:6′,2″-terpyridinyl group in the C3-substituent were synthesized by copper-free Sonogashira coupling of methyl 3-ethynyl-pyropheophorbide-a with the corresponding bromo/iodopyridine, bromobipyridine, or trifluoromethylsulfonyloxy-terpyridine, respectively. Their visible absorption spectra in dichloromethane showed that the maxima of all the coupling products gave similar peak positions and were shifted to a longer wavelength than those of the starting 3-ethynyl-chlorin. The red shifts are ascribable to the intramolecular π-conjugation between the chlorin ring and (oligo)pyridinyl moiety through the CC linker. The products in a diluted solution gave an intense fluorescence emission band at the red-side region of redmost absorption band. Their fluorescence quantum yields were about 25% and comparable to that of the starting unsubstituted 3-ethynyl-chlorin.

ArabidopsisChlorophyll Biosynthesis: An Essential Balance between the Methylerythritol Phosphate and Tetrapyrrole Pathways

Chlorophyll, essential for photosynthesis, is composed of a chlorin ring and a geranylgeranyl diphosphate (GGPP)-derived isoprenoid, which are generated by the tetrapyrrole and methylerythritol phosphate (MEP) biosynthesis pathways, respectively. Although a functional MEP pathway is essential for plant viability, the underlying basis of the requirement has been unclear. We hypothesized that MEP pathway inhibition is lethal because a reduction in GGPP availability results in a stoichiometric imbalance in tetrapyrrolic chlorophyll precursors, which can cause deadly photooxidative stress. Consistent with this hypothesis, lethality of MEP pathway inhibition in Arabidopsis thaliana by fosmidomycin (FSM) is light dependent, and toxicity of MEP pathway inhibition is reduced by genetic and chemical impairment of the tetrapyrrole pathway. In addition, FSM treatment causes a transient accumulation of chlorophyllide and transcripts associated with singlet oxygen-induced stress. Furthermore, exogenous provision of the phytol molecule reduces FSM toxicity when the phytol can be modified for chlorophyll incorporation. These data provide an explanation for FSM toxicity and thereby provide enhanced understanding of the mechanisms of FSM resistance. This insight into MEP pathway inhibition consequences underlines the risk plants undertake to synthesize chlorophyll and suggests the existence of regulation, possibly involving chloroplast-to-nucleus retrograde signaling, that may monitor and maintain balance of chlorophyll precursor synthesis.

Synthesis and optical properties of chlorophyll dimers bridged by cis- and trans-forms of Pt(II) bis-acetylide complexes

Two isomeric zinc–chlorophyll (Zn–Chl) dimers, cis- and trans-forms 1 and 2 connected by a platinum(II) bis-acetylide complex were synthesized by copper(I)-catalyzed coupling of a monomeric Zn–Chl derivative possessing an ethynyl group at the C3 position 5 with the cis- and trans-isomers of Pt(II) bisphosphine complexes, respectively. The corresponding cis- and trans-forms of Zn–Chl monomers 3 and 4 bonding a phenyl group through Pt(II) bis-acetylide were also prepared. These synthetic complexes were fully characterized by 1H NMR, IR and MS spectroscopy. Visible absorption and circular dichroism spectra of 1–5 were measured in organic solvents, showing that the redmost (Qy) bands of 1 and 2 were shifted to a longer wavelength than those of 3 and 4, respectively. The red shifts are ascribable to the extension of π-conjugation in the chlorin rings through a Pt(II) connecter unit along a molecular y-axis. The Qy maxima of trans-dimer 2 and monomer 4 moved bathochromically, compared with the corresponding cis-isomers 1 and 3. The bathochromic shifts are due to a larger π-conjugation in trans Pt-complexes than in cis isomers.

Synthesis, Structure, and Optical and Redox Properties of Chlorophyll Derivatives Directly Coordinating Ruthenium Bisbipyridine at the Peripheral β-Diketonate Moiety

The diketonate group of the peripheral position in chlorophyll derivatives 1 and 2 coordinated ruthenium bisbipyridine to give direct linkages 3-5 of the chlorin ring with the Ru(II) complex. Zinc metalation of the central position in the chlorin ring of free base 3 afforded the Ru-Zn binuclear complex 3-Zn. Because the diketonate group at the C3 position of chlorophyll derivatives coordinated to bulky Ru(bpy)2(2+), the plane of the diketonate group was twisted from the chlorin π ring in synthetic 3-5 and 3-Zn to lead to a partial deconjugation and a slight blue shift of the longest wavelength electronic absorption band in dichloromethane. A broad metal-to-ligand charge-transfer absorption band derived from the Ru complex was observed around 500 nm, in addition to visible absorption bands from the chlorophyll moiety. Chlorophyll derivatives 3-5 and 3-Zn directly coordinating the ruthenium complex were less fluorescent in dichloromethane than chlorophyll-diketonate ligands 1, 2, and 1-Zn due to the heavy atom effect of the ruthenium in a molecule. The coordination to the ruthenium complex moiety at the peripheral position shifted the electrochemical reduction of the chlorin part in acetonitrile to a negative potential, and the coordination to zinc at the central position decreased the redox potentials. Chemical modification of the bipyridine and diketonate ligands of the ruthenium complexes greatly affected the redox potentials of Ru(II)/(III) and/or Ru(II)/(I) but minimally the redox properties of the chlorin moiety. Substitution with electron-donating groups shifted the former to a negative potential but only barely shifted the latter. The zinc metalation caused no apparent shifts for the redox potentials of the Ru center.

Temperature shift effect on the Chlorobaculum tepidum chlorosomes

Chlorobaculum [Cba.] tepidum is known to grow optimally at 48-52°C and can also be cultured at ambient temperatures. In this paper, we prepared constant temperature, temperature shift, and temperature shift followed by backshift cultures and investigated the intrinsic properties and spectral features of chlorosomes from those cultures using various approaches, including temperature-dependent measurements on circular dichroism (CD), UV-visible, and dynamic light scattering. Our studies indicate that (1) chlorosomes from constant temperature cultures at 50 and 30°C exhibited more resistance to heat relative to temperature shift cultures; (2) as temperature increases bacteriochlorophyll c (BChl c) in chlorosomes is prone to demetalation, which forms bacteriopheophytin c, and degradation under aerobic conditions. Some BChl c aggregates inside reduced chlorosomes prepared in low-oxygen environments can reform after heat treatments; (3) temperature shift cultures synthesize and incorporate more BChl c homologs with a smaller substituent at C-8 on the chlorin ring and less BChl c homologs with a larger long-chain alcohol at C-17(3) versus constant-temperature cultures. We hypothesize that the long-chain alcohol at C-17(3) (and perhaps together with the substituent at C-8) may account for thermal stability of chlorosomes and the substituent at C-8 may assist self-assembling BChls; and (4) while almost identical absorption spectra are detected, chlorosomes from different growth conditions exhibited differences in the rotational length of the CD signal, and aerobic and reduced chlorosomes also display different Qy CD intensities. Further, chlorosomes exhibited changes of CD features in response to temperature increases. Additionally, we compare temperature-dependent studies for the Cba. tepidum chlorosomes and previous studies for the Chloroflexus aurantiacus chlorosomes. Together, our work provides useful and novel insights on the properties and organization of chlorosomes.

Deformation of Chlorin Rings in the Photosystem II Crystal Structure

The crystal structure of Photosystem II (PSII) analyzed at a resolution of 1.9 Å revealed deformations of chlorin rings in the chlorophylls for the first time. We investigated the degrees of chlorin ring deformation and factors that contributed to them in the PSII crystal structure, using a normal-coordinate structural decomposition procedure. The out-of-plane distortion of the P(D1) chlorin ring can be described predominantly by a large "doming mode" arising from the axial ligand, D1-His198, as well as the chlorophyll side chains and PSII protein environment. In contrast, the deformation of P(D2) was caused by a "saddling mode" arising from the D2-Trp191 ring and the doming mode arising from D2-His197. Large ruffling modes, which were reported to lower the redox potential in heme proteins, were observed in P(D1) and Chl(D1), but not in P(D2) and Chl(D2). Furthermore, as P(D1) possessed the largest doming mode among the reaction center chlorophylls, the corresponding bacteriochlorophyll P(L) possessed the largest doming mode in bacterial photosynthetic reaction centers. However, the majority of the redox potential shift in the protein environment was determined by the electrostatic environment. The difference in the chlorin ring deformation appears to directly refer to the difference in "the local steric protein environment" rather than the redox potential value in PSII.